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The map label for this gene is 52840747

Identifier: 52840747

GI number: 52840747

Start: 542925

End: 544196

Strand: Reverse

Name: 52840747

Synonym: lpg0502

Alternate gene names: NA

Gene position: 544196-542925 (Counterclockwise)

Preceding gene: 52840754

Following gene: 52840746

Centisome position: 16.02

GC content: 38.84

Gene sequence:

>1272_bases
ATGAAAAAATCTATCCATCGATTAGTAAAGCCCCGGTTATTTGCAATGAGCATTAGCTTGTTGGCTTTTTCCTCTATAAC
TTATGGTGAATCGAACGGCAGTTTTGCTTTGTCCGAGCATTGGTCCATGGGGCAACAAATCAAACTACGATTTGACATAA
ATGAGGTTCCCCAATCAGGTGTTGTATTACATTTAAAAAATGGATTGGCACTAACAGCCGGCGATATCATAAGTCTTGGT
GATCTGTATGGAATTGTAGGAAAACCAATTAGCCATGGCTTAACAAAACTGGAAAAACAAACTCGTTTTAAAGAGGTTTT
CAACAGTTTTGCCAGGAATGCCATTGCAGTTAGTGAGGTAGAAGATCTTAATTCCGTTATTAGAGCAGAAATGCGCGAAG
TCGAATCAGGGATTGCAAAAGGAGAAACTGCTGAAGCCATTTATAAAAGAATTGGGAATGAAGTGGGTCGTCAAATCAAC
TGCATCACCGGGGGTGGTTGTAATAGCCTGACCTGGTGGTTAAATCCTGGCAGATATCTAAAATTAGCCATGGAAAACTA
TGATCACTTTACACCGAATAATCTAATAGCTTATAAAAGCGGGCACCATGTCGCACTGCAACAAGCATTAAAAGCAAAAC
GAACAGGAAAACGCTCTGATTTGGAAGTCGCCTATGCGATGGATGCTTTTGCCTGCCACTATTTATCAGATCACTTCGCT
GCCGGCCATTTGCGCACCCCTAGAGAAGAATTATCAGCCATTATCACACCAACAGTCCTTGGTGCGTTGTTATCCAATTA
TATGCATAATGAAGAAAATAAGTATGGAATTCATGTGACGAATAATCTGGGAGAACAATGGATGGTTTATGGTGACTATT
CTTATTTTAATCCTTTTAATCAAACCAACCAGCAGATGCTCTTAAAGGCCTTGCAAGCTTCCGCTGATGAAATATTTGAA
GCTTATTACTCAGGCGTTCTACCAGAAAAAAATCAAATAGAGGACATGATTCCACACATCACAAAATTAAATGATGAAAA
TAACATGGATATTGCTCCTATGTTCTATTGGGATAAAGAAAACAAACAGTTGTTAAGAAGAACCAATTTGGCAAATCCTT
ACGACAGGCATTGGACAAACAGTTGGTGGGGCTGGAGTACTTTATTATTGTTAAAAACACAATATGGCATAACCTCGACT
GTGCAATTGAGTTTAAGCAAATATTTGTCTCAATATGTACCGGAAGAATTGCAAGATAATCCTTTGGTATAG

Upstream 100 bases:

>100_bases
ATCTCGGGACGAACCAATGCATCAACATTTCATCTCAAACGTTATACAATACGCTATTTCTCACTAAAACCAATGATCAA
TCCCTGTTGATGAGGACATA

Downstream 100 bases:

>100_bases
TAGCAGAACCATAACAAGCAACTATACTCTTATTATCGTATAATACGGGGCATAAAATTAAAAAGGAGTTCACATCATGA
GTAGGGATACTAAGAACCTG

Product: phosphatidylcholine hydrolyzing phospholipase

Products: NA

Alternate protein names: Phospholipase C; Phosphatidylcholine Hydrolyzing Phospholipase

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKKSIHRLVKPRLFAMSISLLAFSSITYGESNGSFALSEHWSMGQQIKLRFDINEVPQSGVVLHLKNGLALTAGDIISLG
DLYGIVGKPISHGLTKLEKQTRFKEVFNSFARNAIAVSEVEDLNSVIRAEMREVESGIAKGETAEAIYKRIGNEVGRQIN
CITGGGCNSLTWWLNPGRYLKLAMENYDHFTPNNLIAYKSGHHVALQQALKAKRTGKRSDLEVAYAMDAFACHYLSDHFA
AGHLRTPREELSAIITPTVLGALLSNYMHNEENKYGIHVTNNLGEQWMVYGDYSYFNPFNQTNQQMLLKALQASADEIFE
AYYSGVLPEKNQIEDMIPHITKLNDENNMDIAPMFYWDKENKQLLRRTNLANPYDRHWTNSWWGWSTLLLLKTQYGITST
VQLSLSKYLSQYVPEELQDNPLV

Sequences:

>Translated_423_residues
MKKSIHRLVKPRLFAMSISLLAFSSITYGESNGSFALSEHWSMGQQIKLRFDINEVPQSGVVLHLKNGLALTAGDIISLG
DLYGIVGKPISHGLTKLEKQTRFKEVFNSFARNAIAVSEVEDLNSVIRAEMREVESGIAKGETAEAIYKRIGNEVGRQIN
CITGGGCNSLTWWLNPGRYLKLAMENYDHFTPNNLIAYKSGHHVALQQALKAKRTGKRSDLEVAYAMDAFACHYLSDHFA
AGHLRTPREELSAIITPTVLGALLSNYMHNEENKYGIHVTNNLGEQWMVYGDYSYFNPFNQTNQQMLLKALQASADEIFE
AYYSGVLPEKNQIEDMIPHITKLNDENNMDIAPMFYWDKENKQLLRRTNLANPYDRHWTNSWWGWSTLLLLKTQYGITST
VQLSLSKYLSQYVPEELQDNPLV
>Mature_423_residues
MKKSIHRLVKPRLFAMSISLLAFSSITYGESNGSFALSEHWSMGQQIKLRFDINEVPQSGVVLHLKNGLALTAGDIISLG
DLYGIVGKPISHGLTKLEKQTRFKEVFNSFARNAIAVSEVEDLNSVIRAEMREVESGIAKGETAEAIYKRIGNEVGRQIN
CITGGGCNSLTWWLNPGRYLKLAMENYDHFTPNNLIAYKSGHHVALQQALKAKRTGKRSDLEVAYAMDAFACHYLSDHFA
AGHLRTPREELSAIITPTVLGALLSNYMHNEENKYGIHVTNNLGEQWMVYGDYSYFNPFNQTNQQMLLKALQASADEIFE
AYYSGVLPEKNQIEDMIPHITKLNDENNMDIAPMFYWDKENKQLLRRTNLANPYDRHWTNSWWGWSTLLLLKTQYGITST
VQLSLSKYLSQYVPEELQDNPLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47966; Mature: 47966

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIHRLVKPRLFAMSISLLAFSSITYGESNGSFALSEHWSMGQQIKLRFDINEVPQSG
CCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCEEEHHHCCCCCEEEEEEEHHHCCCCC
VVLHLKNGLALTAGDIISLGDLYGIVGKPISHGLTKLEKQTRFKEVFNSFARNAIAVSEV
EEEEECCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHH
EDLNSVIRAEMREVESGIAKGETAEAIYKRIGNEVGRQINCITGGGCNSLTWWLNPGRYL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCEE
KLAMENYDHFTPNNLIAYKSGHHVALQQALKAKRTGKRSDLEVAYAMDAFACHYLSDHFA
EEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
AGHLRTPREELSAIITPTVLGALLSNYMHNEENKYGIHVTNNLGEQWMVYGDYSYFNPFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCHHCCCCC
QTNQQMLLKALQASADEIFEAYYSGVLPEKNQIEDMIPHITKLNDENNMDIAPMFYWDKE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
NKQLLRRTNLANPYDRHWTNSWWGWSTLLLLKTQYGITSTVQLSLSKYLSQYVPEELQDN
HHHHHHHHCCCCCCHHCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCC
PLV
CCC
>Mature Secondary Structure
MKKSIHRLVKPRLFAMSISLLAFSSITYGESNGSFALSEHWSMGQQIKLRFDINEVPQSG
CCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCEEEHHHCCCCCEEEEEEEHHHCCCCC
VVLHLKNGLALTAGDIISLGDLYGIVGKPISHGLTKLEKQTRFKEVFNSFARNAIAVSEV
EEEEECCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHH
EDLNSVIRAEMREVESGIAKGETAEAIYKRIGNEVGRQINCITGGGCNSLTWWLNPGRYL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCEE
KLAMENYDHFTPNNLIAYKSGHHVALQQALKAKRTGKRSDLEVAYAMDAFACHYLSDHFA
EEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
AGHLRTPREELSAIITPTVLGALLSNYMHNEENKYGIHVTNNLGEQWMVYGDYSYFNPFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCHHCCCCC
QTNQQMLLKALQASADEIFEAYYSGVLPEKNQIEDMIPHITKLNDENNMDIAPMFYWDKE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
NKQLLRRTNLANPYDRHWTNSWWGWSTLLLLKTQYGITSTVQLSLSKYLSQYVPEELQDN
HHHHHHHHCCCCCCHHCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCC
PLV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA