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The map label for this gene is 52840516

Identifier: 52840516

GI number: 52840516

Start: 309426

End: 309605

Strand: Reverse

Name: 52840516

Synonym: lpg0261

Alternate gene names: NA

Gene position: 309605-309426 (Counterclockwise)

Preceding gene: 52840517

Following gene: 52840505

Centisome position: 9.11

GC content: 35.0

Gene sequence:

>180_bases
ATGGTCAATTTGAAATCGGTCCTTCGAATAGCTGAAGTTGATTGGGGTTTATATAAATATCGTCACCTAGTTGAAAATAT
ATTTGTCAGACTTAAACAGTTTCGTGCTATTGCAACAAGGTACGATAAGTTAAAACGGAATTATGCTTCAACGCTAGCAA
TGGCATGCTCATATATTTAG

Upstream 100 bases:

>100_bases
TGTGAAAAATTTTCTGTTGGATTACGGCCAATAAACTAGGGCGTGTTGACAATTGGCTCCCAACGCCTACGTGCCGCGAC
TTGTTCGCGGCATCCAGGAG

Downstream 100 bases:

>100_bases
CTTCCTATGTAACCCACATAATTTGAATGATATTATCGAACCGAGTCCAAAACTCGATAACAAGGAAGAAAAATGAAATC
ATTTTATGCCTATATTATGG

Product: ISSod6 transposase, ISI301

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISSod6 Transposase; ISSod6 Transposase IS; ISSod6 Transposase ISI; LOW QUALITY PROTEIN Transposase

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MVNLKSVLRIAEVDWGLYKYRHLVENIFVRLKQFRAIATRYDKLKRNYASTLAMACSYI

Sequences:

>Translated_59_residues
MVNLKSVLRIAEVDWGLYKYRHLVENIFVRLKQFRAIATRYDKLKRNYASTLAMACSYI
>Mature_59_residues
MVNLKSVLRIAEVDWGLYKYRHLVENIFVRLKQFRAIATRYDKLKRNYASTLAMACSYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7041; Mature: 7041

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLKSVLRIAEVDWGLYKYRHLVENIFVRLKQFRAIATRYDKLKRNYASTLAMACSYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNLKSVLRIAEVDWGLYKYRHLVENIFVRLKQFRAIATRYDKLKRNYASTLAMACSYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA