Click here to switch to the map view.

The map label for this gene is 52840461

Identifier: 52840461

GI number: 52840461

Start: 238035

End: 238448

Strand: Reverse

Name: 52840461

Synonym: lpg0206

Alternate gene names: NA

Gene position: 238448-238035 (Counterclockwise)

Preceding gene: 52840466

Following gene: 52840458

Centisome position: 7.02

GC content: 38.89

Gene sequence:

>414_bases
ATGAATGGATGGACGCTTAAGGTTTTTGCGATTGCCTTTTTTATCTTTATTGTGACAGATATGATATGGCTTGGGTTCAT
CGCCAGAAATCTTTATTTTGACCAATACCAACAGTGGCTGCGTCTTTCAGAGGGGCAATTAAAGCCAATATGGTGGTCTG
CTTTATTAGTTTATCTGCTTTTTGCCTTGAGTATTATTGTCTTTGTTATACCGCTGGCTAAAACATCGCTACCTTATGCC
GCATTATATGGTGCGCTTCTTGGTGCTATTATTTATGGAATTTATGATTTTACCTGCCTCGCTATTTTTAAGGATTTTCC
TGTCGGTATGGCATTCCTTGATTGGCTATGGGGTATAGTACTGTGCTCTTGGTGTTCGGTAGCAACAATCTATGTGGCAA
GTTATATCAAATAA

Upstream 100 bases:

>100_bases
TGTTAAATGATAGATTTTGGAAATGAAGCTCTATTACCTGAATCCGATTGAATGTAAAATACAAAACCAGAAGGATAAAA
ATCATAATTAAGGGAATAAA

Downstream 100 bases:

>100_bases
GACATCAGAGATTGGCAGAATCCAAGTCTGCCAATATTCGCTGTGCTTTATGGATAGTCTTCTTTTGTTTATCAAAATCC
ATTTTTTGCCAATTCATATA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNGWTLKVFAIAFFIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLLFALSIIVFVIPLAKTSLPYA
ALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIVLCSWCSVATIYVASYIK

Sequences:

>Translated_137_residues
MNGWTLKVFAIAFFIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLLFALSIIVFVIPLAKTSLPYA
ALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIVLCSWCSVATIYVASYIK
>Mature_137_residues
MNGWTLKVFAIAFFIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLLFALSIIVFVIPLAKTSLPYA
ALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIVLCSWCSVATIYVASYIK

Specific function: Unknown

COG id: COG4852

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15765; Mature: 15765

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGWTLKVFAIAFFIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FALSIIVFVIPLAKTSLPYAALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCSWCSVATIYVASYIK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGWTLKVFAIAFFIFIVTDMIWLGFIARNLYFDQYQQWLRLSEGQLKPIWWSALLVYLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FALSIIVFVIPLAKTSLPYAALYGALLGAIIYGIYDFTCLAIFKDFPVGMAFLDWLWGIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCSWCSVATIYVASYIK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA