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The map label for this gene is tspO

Identifier: 52840466

GI number: 52840466

Start: 244591

End: 244992

Strand: Reverse

Name: tspO

Synonym: lpg0211

Alternate gene names: NA

Gene position: 244992-244591 (Counterclockwise)

Preceding gene: 52840467

Following gene: 52840461

Centisome position: 7.21

GC content: 41.29

Gene sequence:

>402_bases
ATGCTGACGCAAGCGAATATTCCCTCTTGGTATGAGGGGCTCAATAAATCCGGTTTAACTCCTCCTGGACCAGTATTTTC
AATTGTTTGGTCGATTTTATATGCCCTTCTTGCAATAGTGGGTTGGGTTTTATGGTGCTCTCGAAATGAGTCTGAGATGA
GATCTGTGTTTTATTTATATTCAGTACAGATGCTGATGAATTGGGCATGGACCCCGCTTTTTTTTGTGCTGCATTGGACT
GGTCTTAGTTTTTTATGGATTCTTGTAATGGCGGGGCTCACTGGGCTTCTGATGTTTAGCCAAACAAATAAGAAAAAAAG
CCTTGCTATATTGTTGCTACCCTATCTCATTTGGTTGCTTTTTGCCGCCTATCTCAATGGCGTGATATGGCTTCTCAATT
AA

Upstream 100 bases:

>100_bases
AGATTAACTAAAATTTGGAGAGACCCCATTGAATAAAAAAAGTTGGACAGAGCTGATTGCCTGGATCATTACCTTTGAAG
CAATTGGTTTTTTTTTAGGA

Downstream 100 bases:

>100_bases
CTGTTCCCAAGTTTTCCCTTAAGCCAAATACAAACTTGGCTATAGCGAAATCGTGCTAAATCTTACTTTGCGAGATAAGT
ACAGGACTTACGAAAAACTC

Product: tryptophan rich sensory protein TspO

Products: NA

Alternate protein names: TspO-And MBR-Like Protein; Tryptophan-Rich Sensory Protein; TspO/MBR Family Protein; DNA Gyrase Inhibitor; TspO And MBR Like Proteins; CrtK/TspO Family Sensor Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLTQANIPSWYEGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSVFYLYSVQMLMNWAWTPLFFVLHWT
GLSFLWILVMAGLTGLLMFSQTNKKKSLAILLLPYLIWLLFAAYLNGVIWLLN

Sequences:

>Translated_133_residues
MLTQANIPSWYEGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSVFYLYSVQMLMNWAWTPLFFVLHWT
GLSFLWILVMAGLTGLLMFSQTNKKKSLAILLLPYLIWLLFAAYLNGVIWLLN
>Mature_133_residues
MLTQANIPSWYEGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSVFYLYSVQMLMNWAWTPLFFVLHWT
GLSFLWILVMAGLTGLLMFSQTNKKKSLAILLLPYLIWLLFAAYLNGVIWLLN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19920472, Length=137, Percent_Identity=34.3065693430657, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15338; Mature: 15338

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQANIPSWYEGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSVFYLY
CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SVQMLMNWAWTPLFFVLHWTGLSFLWILVMAGLTGLLMFSQTNKKKSLAILLLPYLIWLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FAAYLNGVIWLLN
HHHHHCCEEEECC
>Mature Secondary Structure
MLTQANIPSWYEGLNKSGLTPPGPVFSIVWSILYALLAIVGWVLWCSRNESEMRSVFYLY
CCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SVQMLMNWAWTPLFFVLHWTGLSFLWILVMAGLTGLLMFSQTNKKKSLAILLLPYLIWLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FAAYLNGVIWLLN
HHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA