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The map label for this gene is pqiB [C]

Identifier: 52840424

GI number: 52840424

Start: 198678

End: 199463

Strand: Reverse

Name: pqiB [C]

Synonym: lpg0169

Alternate gene names: 52840424

Gene position: 199463-198678 (Counterclockwise)

Preceding gene: 52840425

Following gene: 52840423

Centisome position: 5.87

GC content: 37.53

Gene sequence:

>786_bases
TTGCCAGTATGTATATTACTCTTACGTTTTAGGGACGACGTGCATAACGAACGATTCTATACATTAGTGGGTATTTTTAT
AGTAGGCGCCCTATGTTTAATGATTCTAGGCGGTACTTTTTTTTATATAGAATACAAACGCGCACAAAAACAAACTTTTG
TCATGTTTTTCAAAGGCTCTTTAAAAGGGCTAGTCACTACTGCCCCAGTAACCTATCGAGGCGTGAAGATTGGTGAAGTC
AAAGTCATAGAAATCACTGAAAATAAAGAGCACAGTAAAGTACTTATTCCTGTTTACGTACAATTTTTTGTCGAGAGAAC
CTATGGTTTTAGCCAAGACCCTATTCACCTGCTTATTGATAATGGGTATGTAGCAAATATCACCAAACCTAACCTGTTAA
CAGGCGTTGCTGAAATTGAGTTGATTAAGCCAACCCCAGCGGTAAAATATAAACAAACATACTACCATTCTTATCCTGTT
TTCCCGACTCACAATTCAGCTGAAAAATATACATCTATGGAAGAAGCGTTTGAGGCCGCGAAAAAGGCTTTTGAAGACGT
CAGTGAATTAGTTCGTTCCAAAGAAATTCAAGATACTTTAGAGGCGATACAAAAAGTTTCTGAAAATTTAGGGCAACTAG
CCTCTAGCTTAAACCAAGATGTGCCGAGTGTTGTTGCGTATTTAAATCAAAGCTTAAAACAAATTACCAGTGCAGCTTAC
TCCACTCAAAACTTGACGGATTATTTGTCTCGATATCCTGAATCTTTACTTCGAGGCAAAAGATGA

Upstream 100 bases:

>100_bases
TTGACTTCTGGTTATTATTATTATGAAGCATCTATTAGACATATTTATTTGAGAAAAGCAGTTTCTCGAATTTTAACGCG
TGGCTCATTCTGGCTGATCA

Downstream 100 bases:

>100_bases
AAAACAATAGACATTTTTTAAAATTCTATTGCATCAGAGATTTGAGTTGGCTAAGTAGTGTTCGAGCCTCTTTTATATAT
TCCCCATTTGAACGCATCAC

Product: transmembrane protein

Products: NA

Alternate protein names: Mammalian Cell Entry Related Domain Protein; Paraquat-Inducible B Protein; Transmembrane Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPVCILLLRFRDDVHNERFYTLVGIFIVGALCLMILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEV
KVIEITENKEHSKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPV
FPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAY
STQNLTDYLSRYPESLLRGKR

Sequences:

>Translated_261_residues
MPVCILLLRFRDDVHNERFYTLVGIFIVGALCLMILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEV
KVIEITENKEHSKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPV
FPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAY
STQNLTDYLSRYPESLLRGKR
>Mature_260_residues
PVCILLLRFRDDVHNERFYTLVGIFIVGALCLMILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEVK
VIEITENKEHSKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVF
PTHNSAEKYTSMEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAYS
TQNLTDYLSRYPESLLRGKR

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29649; Mature: 29517

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVCILLLRFRDDVHNERFYTLVGIFIVGALCLMILGGTFFYIEYKRAQKQTFVMFFKGS
CCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEHHCCCEEEEEEECC
LKGLVTTAPVTYRGVKIGEVKVIEITENKEHSKVLIPVYVQFFVERTYGFSQDPIHLLID
CCCEEEECCEEECCEEECCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEE
NGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTSMEEAFEAA
CCEEEECCCCHHHHHHHHEEEECCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHH
KKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
STQNLTDYLSRYPESLLRGKR
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PVCILLLRFRDDVHNERFYTLVGIFIVGALCLMILGGTFFYIEYKRAQKQTFVMFFKGS
CCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEHHCCCEEEEEEECC
LKGLVTTAPVTYRGVKIGEVKVIEITENKEHSKVLIPVYVQFFVERTYGFSQDPIHLLID
CCCEEEECCEEECCEEECCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEE
NGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTSMEEAFEAA
CCEEEECCCCHHHHHHHHEEEECCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHH
KKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
STQNLTDYLSRYPESLLRGKR
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA