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The map label for this gene is ymbA [C]

Identifier: 52840423

GI number: 52840423

Start: 197956

End: 198681

Strand: Reverse

Name: ymbA [C]

Synonym: lpg0168

Alternate gene names: 52840423

Gene position: 198681-197956 (Counterclockwise)

Preceding gene: 52840424

Following gene: 52840422

Centisome position: 5.85

GC content: 34.99

Gene sequence:

>726_bases
ATGAAAAACAATAGACATTTTTTAAAATTCTATTGCATCAGAGATTTGAGTTGGCTAAGTAGTGTTCGAGCCTCTTTTAT
ATATTCCCCATTTGAACGCATCACATCCTCGCCTTTTTCTAGCTATATTGAGCTTCGAAAGAAACCTGTGAAGTTCCTGT
TAATCTTGCTCATTGCCTTAACACTCTGCGATTGCGGTCGAAGCAAAGAAACTCAATTTTATTTATTAACACCTATTCCC
CCTCAAAAAAACAGCCGTAACTCCTATAATCATTTACAGATCGGTGTTGATGAAGTGAGTATTCCTGATTATATGAAAAA
ACCTCAATTAATGATTCACCAGACAGCTCATCACCTAACTCTCGAAGAATTTAACCAATGGGCTGGGGCCTTGGATAAGA
ATATTACTCTTGTATTAACTACTAATCTTTCAACTTTAATGCCAGGAGTAGTAGTTCAGACCTCACCTTGGAACAATAAA
TTCCACCCGGATTATCATCTTCAAGTAATGATTTCACAATTTGAAATTGATATTCATGGTAACAGTATTTTAAGAGCCGA
ATACCTTATTTACCGAAAAGAAGAGTTAATCTACAAAGGAAATGCTTATTACCATATTAAAGTCCCTTTAATCAGTATTG
AAACGCTTGTGCAGAGCATGAATACGAACCTGACTCATTTAACTGAAGAAATTGCACGGTTTTTTATAAAAAACACGACT
AAGTAA

Upstream 100 bases:

>100_bases
TAAATCAAAGCTTAAAACAAATTACCAGTGCAGCTTACTCCACTCAAAACTTGACGGATTATTTGTCTCGATATCCTGAA
TCTTTACTTCGAGGCAAAAG

Downstream 100 bases:

>100_bases
TATACTCATAGTGTCTTCAAATCAAGAAAAATTATTTTGATTGAATTCAGCTATTATAATGCTTTAAAGGCATTATTTTA
TGGGATAATAAAGAGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKNNRHFLKFYCIRDLSWLSSVRASFIYSPFERITSSPFSSYIELRKKPVKFLLILLIALTLCDCGRSKETQFYLLTPIP
PQKNSRNSYNHLQIGVDEVSIPDYMKKPQLMIHQTAHHLTLEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWNNK
FHPDYHLQVMISQFEIDIHGNSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTT
K

Sequences:

>Translated_241_residues
MKNNRHFLKFYCIRDLSWLSSVRASFIYSPFERITSSPFSSYIELRKKPVKFLLILLIALTLCDCGRSKETQFYLLTPIP
PQKNSRNSYNHLQIGVDEVSIPDYMKKPQLMIHQTAHHLTLEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWNNK
FHPDYHLQVMISQFEIDIHGNSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTT
K
>Mature_241_residues
MKNNRHFLKFYCIRDLSWLSSVRASFIYSPFERITSSPFSSYIELRKKPVKFLLILLIALTLCDCGRSKETQFYLLTPIP
PQKNSRNSYNHLQIGVDEVSIPDYMKKPQLMIHQTAHHLTLEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWNNK
FHPDYHLQVMISQFEIDIHGNSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTT
K

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28170; Mature: 28170

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNRHFLKFYCIRDLSWLSSVRASFIYSPFERITSSPFSSYIELRKKPVKFLLILLIAL
CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TLCDCGRSKETQFYLLTPIPPQKNSRNSYNHLQIGVDEVSIPDYMKKPQLMIHQTAHHLT
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCHHEEEHHHHHCC
LEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWNNKFHPDYHLQVMISQFEIDIHG
HHHHHHHHHHCCCCEEEEEECCHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECC
NSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTT
CEEEEHHHHEEEHHHEEEECCEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure
MKNNRHFLKFYCIRDLSWLSSVRASFIYSPFERITSSPFSSYIELRKKPVKFLLILLIAL
CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TLCDCGRSKETQFYLLTPIPPQKNSRNSYNHLQIGVDEVSIPDYMKKPQLMIHQTAHHLT
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCHHEEEHHHHHCC
LEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWNNKFHPDYHLQVMISQFEIDIHG
HHHHHHHHHHCCCCEEEEEECCHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECC
NSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTT
CEEEEHHHHEEEHHHEEEECCEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA