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The map label for this gene is ynjF [C]

Identifier: 52840360

GI number: 52840360

Start: 120045

End: 120641

Strand: Reverse

Name: ynjF [C]

Synonym: lpg0105

Alternate gene names: 52840360

Gene position: 120641-120045 (Counterclockwise)

Preceding gene: 52840361

Following gene: 52840359

Centisome position: 3.55

GC content: 37.19

Gene sequence:

>597_bases
ATGCTTGAACAATCATTACGACATTATTATCAGCTTGTCTTGGTAGATCCCATACTACCTGCTTTACGTGACAGGATAAC
GCCATTGTCCATTACCTGGTTGTCGGGAATATTTGGCTTGTTGTTTATTCCTTTTGTCTTATTAGACAAACCTTATATTG
CAATTAGCTTTCTCTTGCTTTCTGGATACCTGGATACTCTTGATGGTTCGTTGGCCCGCTTTCAAAACAGAGCCTCTGAT
TTTGGCTCAGCAATGGATATCGTCATAGATAGAATTGTAGAATTTTCTGCTGTTCTTGCTTTGTATCTTTTTGATCCACA
ACACCGTGCCACTTTAGCCATTTTAATGTTAGGCAGTATTTTGCTCTGTATTACAAGTTTTCTGGTTGTGGGAATTTTTT
CCAACAATACTACTCAAAAAAGTTTTTATTACAGCCCGGGGATAATGGAGCGTGCCGAAGCATTTCTATTCTTTATTTTT
ATGACATTATTTTCCAGCTGCTTTAATTTTCTTGCCGCTCTCTTTTGTTTTTTAGTCTGTTTAACCGCGTTGATAAGGCT
TTTTGAATTTAAAAAAAGTGTACAGGCTCCAAGTTAG

Upstream 100 bases:

>100_bases
GGATATCGAATGCTTCTTATATAGTACTTGTCCATAACTCACGCTAGATAGCCAAATAACTGCCATAAGCTCATAGTTGG
CCTAATCGCGATGAATTATT

Downstream 100 bases:

>100_bases
CGAAACAATAAGTTTTCCGAAGCCTGATTTAAAACTTTCTCTGATTTTATGCTGACTACAATACAAAATCTTGTATAATT
TACAGCAATTCATAAAAGAG

Product: cytochrome oxidase-like

Products: NA

Alternate protein names: Cytochrome Oxidase-Like Protein; Phosphatidoglycerophosphate Synthase

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLEQSLRHYYQLVLVDPILPALRDRITPLSITWLSGIFGLLFIPFVLLDKPYIAISFLLLSGYLDTLDGSLARFQNRASD
FGSAMDIVIDRIVEFSAVLALYLFDPQHRATLAILMLGSILLCITSFLVVGIFSNNTTQKSFYYSPGIMERAEAFLFFIF
MTLFSSCFNFLAALFCFLVCLTALIRLFEFKKSVQAPS

Sequences:

>Translated_198_residues
MLEQSLRHYYQLVLVDPILPALRDRITPLSITWLSGIFGLLFIPFVLLDKPYIAISFLLLSGYLDTLDGSLARFQNRASD
FGSAMDIVIDRIVEFSAVLALYLFDPQHRATLAILMLGSILLCITSFLVVGIFSNNTTQKSFYYSPGIMERAEAFLFFIF
MTLFSSCFNFLAALFCFLVCLTALIRLFEFKKSVQAPS
>Mature_198_residues
MLEQSLRHYYQLVLVDPILPALRDRITPLSITWLSGIFGLLFIPFVLLDKPYIAISFLLLSGYLDTLDGSLARFQNRASD
FGSAMDIVIDRIVEFSAVLALYLFDPQHRATLAILMLGSILLCITSFLVVGIFSNNTTQKSFYYSPGIMERAEAFLFFIF
MTLFSSCFNFLAALFCFLVCLTALIRLFEFKKSVQAPS

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22405; Mature: 22405

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQSLRHYYQLVLVDPILPALRDRITPLSITWLSGIFGLLFIPFVLLDKPYIAISFLLL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SGYLDTLDGSLARFQNRASDFGSAMDIVIDRIVEFSAVLALYLFDPQHRATLAILMLGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLCITSFLVVGIFSNNTTQKSFYYSPGIMERAEAFLFFIFMTLFSSCFNFLAALFCFLVC
HHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALIRLFEFKKSVQAPS
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLEQSLRHYYQLVLVDPILPALRDRITPLSITWLSGIFGLLFIPFVLLDKPYIAISFLLL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SGYLDTLDGSLARFQNRASDFGSAMDIVIDRIVEFSAVLALYLFDPQHRATLAILMLGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLCITSFLVVGIFSNNTTQKSFYYSPGIMERAEAFLFFIFMTLFSSCFNFLAALFCFLVC
HHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALIRLFEFKKSVQAPS
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA