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The map label for this gene is vipF

Identifier: 52840358

GI number: 52840358

Start: 118383

End: 119243

Strand: Reverse

Name: vipF

Synonym: lpg0103

Alternate gene names: NA

Gene position: 119243-118383 (Counterclockwise)

Preceding gene: 52840359

Following gene: 52840357

Centisome position: 3.51

GC content: 36.24

Gene sequence:

>861_bases
ATGATTACTCAAGTTAACCAATTAGATGAACTTCAATTAAAAGACTTAAAAACATTAAGAGCAGAGTGTAAAAAAAATGA
TGGCAGCATCCCCAATCTATATATCCATATATTGAAACAACACCGCTCTCTTCCTACAAGCTTCCTTTATTATCAAAACG
GGGCCTTGATTGGATTCTTGAGTATTTATTTCTTTTATGATGATGCTGTTGAAGTTGCTGTTCTGGTTAGTCCCCAATAT
CGCAGACAAGGGATTGCCAAACAATTAATAAAGGAAGCATTACCCTTAATTAAGTCTCAAAACTACTTTAACTTGATTTT
TTCATGCCCCTCACGCCTCAATGATAACTGGTTAACCTCAAAAGGATTTACCTACCTGCATAGCGAATATTTCATGGAAC
GTGATGATTTAAATCCTATACTCGATTACATACGTCCATTGTCCTTTCGCATGGCGACTTTAGAGGATATTCCCATATTA
TGTGGCCTCGATGAAGTATGTTTTCCTGATAAAAACCAAGACTCGGTTCACCGATTCCAACAAATTCTTAACGAAAGAGA
ATATGAAATTGTAATAGCCATGCTCAATAATCATCCCATAGGAAAATCCCATATTCGCTGGCAAACCAAAAGGGCTACCT
TGTCTGATATTGCCATATTGCCTAAAGAACAAGGAAAAGGATTTGGTTCTGCCTTGATTGCTCATTGCATCAATATGATT
TTGAGCGAAGGCAAATCCCGGGTGGACCTTGACGTTGAAACCCATAATAAAAAAGCATTAAATCTGTATATTCAGCTTGG
ATTTCATATTCAAAATGCTTGTGATTACTGGTCAATTAATGTGAATCAACTTGCAAAATAA

Upstream 100 bases:

>100_bases
TGATCCATAGTTTTATCGCTTATCAAAAAAGAATAAGCAATTCATGAGAAAACACGCTAATCTAATAAATAATAATTTTT
AATTTTTTACTAATACAATT

Downstream 100 bases:

>100_bases
AACTGTTTATTCTTTTGTTACAAATTACATATTATAAATATGGCTTGACATAATTAAAATCTCACCATTAGTATTGCGAA
TGGCGATAGAGGAAGGCTTG

Product: GNAT family N-acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; N-Terminal Acetyltransferase GNAT Family; Acetyltransferase GNAT Family; Acetyltransferase Possibly Rimi-Like Protein; GNAT Family Acetyltransferase; Ribosomal-Protein-Alanine Acetyltransferase

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MITQVNQLDELQLKDLKTLRAECKKNDGSIPNLYIHILKQHRSLPTSFLYYQNGALIGFLSIYFFYDDAVEVAVLVSPQY
RRQGIAKQLIKEALPLIKSQNYFNLIFSCPSRLNDNWLTSKGFTYLHSEYFMERDDLNPILDYIRPLSFRMATLEDIPIL
CGLDEVCFPDKNQDSVHRFQQILNEREYEIVIAMLNNHPIGKSHIRWQTKRATLSDIAILPKEQGKGFGSALIAHCINMI
LSEGKSRVDLDVETHNKKALNLYIQLGFHIQNACDYWSINVNQLAK

Sequences:

>Translated_286_residues
MITQVNQLDELQLKDLKTLRAECKKNDGSIPNLYIHILKQHRSLPTSFLYYQNGALIGFLSIYFFYDDAVEVAVLVSPQY
RRQGIAKQLIKEALPLIKSQNYFNLIFSCPSRLNDNWLTSKGFTYLHSEYFMERDDLNPILDYIRPLSFRMATLEDIPIL
CGLDEVCFPDKNQDSVHRFQQILNEREYEIVIAMLNNHPIGKSHIRWQTKRATLSDIAILPKEQGKGFGSALIAHCINMI
LSEGKSRVDLDVETHNKKALNLYIQLGFHIQNACDYWSINVNQLAK
>Mature_286_residues
MITQVNQLDELQLKDLKTLRAECKKNDGSIPNLYIHILKQHRSLPTSFLYYQNGALIGFLSIYFFYDDAVEVAVLVSPQY
RRQGIAKQLIKEALPLIKSQNYFNLIFSCPSRLNDNWLTSKGFTYLHSEYFMERDDLNPILDYIRPLSFRMATLEDIPIL
CGLDEVCFPDKNQDSVHRFQQILNEREYEIVIAMLNNHPIGKSHIRWQTKRATLSDIAILPKEQGKGFGSALIAHCINMI
LSEGKSRVDLDVETHNKKALNLYIQLGFHIQNACDYWSINVNQLAK

Specific function: Unknown

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33085; Mature: 33085

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQVNQLDELQLKDLKTLRAECKKNDGSIPNLYIHILKQHRSLPTSFLYYQNGALIGFL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHH
SIYFFYDDAVEVAVLVSPQYRRQGIAKQLIKEALPLIKSQNYFNLIFSCPSRLNDNWLTS
HHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
KGFTYLHSEYFMERDDLNPILDYIRPLSFRMATLEDIPILCGLDEVCFPDKNQDSVHRFQ
CCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCHHCCCCCCHHHHHHHH
QILNEREYEIVIAMLNNHPIGKSHIRWQTKRATLSDIAILPKEQGKGFGSALIAHCINMI
HHHCCCCEEEEEEEECCCCCCCHHHEEEHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHH
LSEGKSRVDLDVETHNKKALNLYIQLGFHIQNACDYWSINVNQLAK
HHCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCEEECCHHHHCC
>Mature Secondary Structure
MITQVNQLDELQLKDLKTLRAECKKNDGSIPNLYIHILKQHRSLPTSFLYYQNGALIGFL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHH
SIYFFYDDAVEVAVLVSPQYRRQGIAKQLIKEALPLIKSQNYFNLIFSCPSRLNDNWLTS
HHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
KGFTYLHSEYFMERDDLNPILDYIRPLSFRMATLEDIPILCGLDEVCFPDKNQDSVHRFQ
CCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCHHCCCCCCHHHHHHHH
QILNEREYEIVIAMLNNHPIGKSHIRWQTKRATLSDIAILPKEQGKGFGSALIAHCINMI
HHHCCCCEEEEEEEECCCCCCCHHHEEEHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHH
LSEGKSRVDLDVETHNKKALNLYIQLGFHIQNACDYWSINVNQLAK
HHCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA