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The map label for this gene is coq7 [H]

Identifier: 52840284

GI number: 52840284

Start: 34187

End: 34900

Strand: Reverse

Name: coq7 [H]

Synonym: lpg0028

Alternate gene names: 52840284

Gene position: 34900-34187 (Counterclockwise)

Preceding gene: 52840286

Following gene: 52840283

Centisome position: 1.03

GC content: 41.04

Gene sequence:

>714_bases
TTGATTAATGACTTCAAACTACACACTAATCAAGTTAACATAGAGACCTTACACTTTATTTTTAAAGTATCCATGCGAAC
ATCAAGCTTCCTCGATAGATTAATAGGTGAAGTCGATAGTGCGCTTCGAACCCTCGTTTTGCCACAAAAACGTATTACAA
CGCGCCAATCTCCCGCTGAAAATCTGGCTGATACTGTGCTTTCCGCTCAGGAAAAAAAACATATTTCAGGATTAATGAGA
GTAAATCATGCCGGAGAAGTATGTGCTCAAGCGCTTTATCAAGGACAAGCTTTAACAGCACGACTTACTCACATCAAAGA
GCAAATGGCTAGTGCCGCGGCTGAAGAAGTTGATCATTTGGCCTGGTGCGAAGAACGTTTGTATGAATTAGGCAGCAAAC
CCAGCCTTTTAAATCCCATCTGGTATTGTGGTTCGGTTCTATTAGGCGCCCTGGCTGGATTGGCTGGCGATAAAGTCAGC
TTGGGATTTGTTGCTGAAACAGAGCGCCAGGTAACCGCTCATTTACAAAGGCATCTGCATTATCTCCCGGAAAAGGATAA
AAAAACTATAGCCATATTAAAAAGAATGCAAGAAGATGAGGAACATCATGCGCATACAGCGATGGAAGCTGGAGCAGTTG
AACTTCCCTATATTATTAAGCAATTGATGAATGCTGTATCAAAATTAATGACTCAGAGCAGTTATTATATTTAA

Upstream 100 bases:

>100_bases
CTTATTGTGTAATAATCAAAATAGATGTATAAAATTTACCCCATCAATAGCTCCATCTTAACTCGCAGCCACCGATATTA
AATTGCCTTATAAAATTTAA

Downstream 100 bases:

>100_bases
CAGGATATGATTACATATGGACTACAATACGATATTCATTCTATTCGTCATATTTATTGCGTTCGTATTTGATTTTATCA
ACGGATTTCATGATGCCGCC

Product: ubiquinone biosynthesis protein COQ7

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MINDFKLHTNQVNIETLHFIFKVSMRTSSFLDRLIGEVDSALRTLVLPQKRITTRQSPAENLADTVLSAQEKKHISGLMR
VNHAGEVCAQALYQGQALTARLTHIKEQMASAAAEEVDHLAWCEERLYELGSKPSLLNPIWYCGSVLLGALAGLAGDKVS
LGFVAETERQVTAHLQRHLHYLPEKDKKTIAILKRMQEDEEHHAHTAMEAGAVELPYIIKQLMNAVSKLMTQSSYYI

Sequences:

>Translated_237_residues
MINDFKLHTNQVNIETLHFIFKVSMRTSSFLDRLIGEVDSALRTLVLPQKRITTRQSPAENLADTVLSAQEKKHISGLMR
VNHAGEVCAQALYQGQALTARLTHIKEQMASAAAEEVDHLAWCEERLYELGSKPSLLNPIWYCGSVLLGALAGLAGDKVS
LGFVAETERQVTAHLQRHLHYLPEKDKKTIAILKRMQEDEEHHAHTAMEAGAVELPYIIKQLMNAVSKLMTQSSYYI
>Mature_237_residues
MINDFKLHTNQVNIETLHFIFKVSMRTSSFLDRLIGEVDSALRTLVLPQKRITTRQSPAENLADTVLSAQEKKHISGLMR
VNHAGEVCAQALYQGQALTARLTHIKEQMASAAAEEVDHLAWCEERLYELGSKPSLLNPIWYCGSVLLGALAGLAGDKVS
LGFVAETERQVTAHLQRHLHYLPEKDKKTIAILKRMQEDEEHHAHTAMEAGAVELPYIIKQLMNAVSKLMTQSSYYI

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol [H]

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family [H]

Homologues:

Organism=Drosophila melanogaster, GI24640215, Length=163, Percent_Identity=25.1533742331288, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566 [H]

Pfam domain/function: PF03232 COQ7 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 26587; Mature: 26587

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDFKLHTNQVNIETLHFIFKVSMRTSSFLDRLIGEVDSALRTLVLPQKRITTRQSPAE
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH
NLADTVLSAQEKKHISGLMRVNHAGEVCAQALYQGQALTARLTHIKEQMASAAAEEVDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AWCEERLYELGSKPSLLNPIWYCGSVLLGALAGLAGDKVSLGFVAETERQVTAHLQRHLH
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHH
YLPEKDKKTIAILKRMQEDEEHHAHTAMEAGAVELPYIIKQLMNAVSKLMTQSSYYI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MINDFKLHTNQVNIETLHFIFKVSMRTSSFLDRLIGEVDSALRTLVLPQKRITTRQSPAE
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH
NLADTVLSAQEKKHISGLMRVNHAGEVCAQALYQGQALTARLTHIKEQMASAAAEEVDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AWCEERLYELGSKPSLLNPIWYCGSVLLGALAGLAGDKVSLGFVAETERQVTAHLQRHLH
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHH
YLPEKDKKTIAILKRMQEDEEHHAHTAMEAGAVELPYIIKQLMNAVSKLMTQSSYYI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA