| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998515
Identifier: 39998515
GI number: 39998515
Start: 3771846
End: 3772745
Strand: Reverse
Name: 39998515
Synonym: GSU3426
Alternate gene names: NA
Gene position: 3772745-3771846 (Counterclockwise)
Preceding gene: 39998516
Following gene: 39998512
Centisome position: 98.91
GC content: 66.89
Gene sequence:
>900_bases GTGAAGAGATACTTTCTGGCCGCAGCCGCGGCCGTTTTCGTTCTGATGATGACCTCCGTCACCCGGGCGGGCGACGCGAA GCGCTACGCCGTGGCGGTGCTGCCGGCACCGGTCCTCAATACTCCCGATTTCCCCGGCATCTTCGGCGGCAGGGACGGCT CGGCCCTGCGTACCGACCGACAGGGCCAGATCCGGGAGCTGGAATTCATCGCCCTGCCGGGGACGGTGTTCGTGGTTCAC GAGACAGTCCGAAACGGCTCATCAGTGGTCCACCGGGTGACCACCGACGACTATCCCTATCCATCGGCCACGGGTTATTT CGTGGATGACCGTTTCGTCCGGCTGACGGATGAGGAACCGCCGCCGCGGTCCCGGACGCTCCCTTCCCGCGACGAGATCA TCATCCGCCTTCTGGCTGCCAGGGGAAGCCGTTACGTCTGGGGGGGCAATGTGCGCGCCGGGGTGTCGGCAATGGTGGAT TTCTTTCATCCACCGGGCAGGCTCCCCGCCGAAACGAACCGCCGCTGGCGGCTCCAGGGGCTCGACTGCTCGGGGCTTCT TTACGAGGCAACCAACGGCGTCACTCCCCGGAACACGAGTGAGCTCACCGGCTTCGGCCGGGGCGTCCCCATTGCCGGCC TTTCTGTCGAGGCCATCCGCCGTCGACTGGAGCCCCTGGACCTGATCGCCTGGAAGGGGCACGTGATCATCGTGCTGGAC CGGGAACGGACCATCGAGAGCCGCCTCGGCCCGGTGCCGGGGGTGCGGGACGGCGTGGTGGTCCGGCCCTTGGGGGAGGT GCTGGCGGAGCTAATGACGGGGCGAACGCCGTCGGACCGGTTCAGGGACGCGTACGGGCAGGGGGAGAAGACTTTTGTCG TCCGGCGGTGGTACGAATAG
Upstream 100 bases:
>100_bases GACAGCACTGATAGCAACAATTGTTGATCCTCCCCCTGTTCCTCTGAGCTCTCTGTGGCTAATGCGTTATCTGTGTGTAT TTTTCGAAGAAGGGAGATGT
Downstream 100 bases:
>100_bases GGCGGTCAGCAGCCCCGCCGCTTGAGCTCCTGGGCTGCCAGGCGCTTGCGTTCGGTCCCCAGGCGTCCCGAGGCGGCCAG GTTCCTCACCTCCATGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKRYFLAAAAAVFVLMMTSVTRAGDAKRYAVAVLPAPVLNTPDFPGIFGGRDGSALRTDRQGQIRELEFIALPGTVFVVH ETVRNGSSVVHRVTTDDYPYPSATGYFVDDRFVRLTDEEPPPRSRTLPSRDEIIIRLLAARGSRYVWGGNVRAGVSAMVD FFHPPGRLPAETNRRWRLQGLDCSGLLYEATNGVTPRNTSELTGFGRGVPIAGLSVEAIRRRLEPLDLIAWKGHVIIVLD RERTIESRLGPVPGVRDGVVVRPLGEVLAELMTGRTPSDRFRDAYGQGEKTFVVRRWYE
Sequences:
>Translated_299_residues MKRYFLAAAAAVFVLMMTSVTRAGDAKRYAVAVLPAPVLNTPDFPGIFGGRDGSALRTDRQGQIRELEFIALPGTVFVVH ETVRNGSSVVHRVTTDDYPYPSATGYFVDDRFVRLTDEEPPPRSRTLPSRDEIIIRLLAARGSRYVWGGNVRAGVSAMVD FFHPPGRLPAETNRRWRLQGLDCSGLLYEATNGVTPRNTSELTGFGRGVPIAGLSVEAIRRRLEPLDLIAWKGHVIIVLD RERTIESRLGPVPGVRDGVVVRPLGEVLAELMTGRTPSDRFRDAYGQGEKTFVVRRWYE >Mature_299_residues MKRYFLAAAAAVFVLMMTSVTRAGDAKRYAVAVLPAPVLNTPDFPGIFGGRDGSALRTDRQGQIRELEFIALPGTVFVVH ETVRNGSSVVHRVTTDDYPYPSATGYFVDDRFVRLTDEEPPPRSRTLPSRDEIIIRLLAARGSRYVWGGNVRAGVSAMVD FFHPPGRLPAETNRRWRLQGLDCSGLLYEATNGVTPRNTSELTGFGRGVPIAGLSVEAIRRRLEPLDLIAWKGHVIIVLD RERTIESRLGPVPGVRDGVVVRPLGEVLAELMTGRTPSDRFRDAYGQGEKTFVVRRWYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33206; Mature: 33206
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYFLAAAAAVFVLMMTSVTRAGDAKRYAVAVLPAPVLNTPDFPGIFGGRDGSALRTDR CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC QGQIRELEFIALPGTVFVVHETVRNGSSVVHRVTTDDYPYPSATGYFVDDRFVRLTDEEP CCCEEEEEEEECCCEEEEEEEHHCCCCCEEEEECCCCCCCCCCCEEEECCEEEEECCCCC PPRSRTLPSRDEIIIRLLAARGSRYVWGGNVRAGVSAMVDFFHPPGRLPAETNRRWRLQG CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEC LDCSGLLYEATNGVTPRNTSELTGFGRGVPIAGLSVEAIRRRLEPLDLIAWKGHVIIVLD CCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCEEEEEC RERTIESRLGPVPGVRDGVVVRPLGEVLAELMTGRTPSDRFRDAYGQGEKTFVVRRWYE CCHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure MKRYFLAAAAAVFVLMMTSVTRAGDAKRYAVAVLPAPVLNTPDFPGIFGGRDGSALRTDR CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC QGQIRELEFIALPGTVFVVHETVRNGSSVVHRVTTDDYPYPSATGYFVDDRFVRLTDEEP CCCEEEEEEEECCCEEEEEEEHHCCCCCEEEEECCCCCCCCCCCEEEECCEEEEECCCCC PPRSRTLPSRDEIIIRLLAARGSRYVWGGNVRAGVSAMVDFFHPPGRLPAETNRRWRLQG CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEC LDCSGLLYEATNGVTPRNTSELTGFGRGVPIAGLSVEAIRRRLEPLDLIAWKGHVIIVLD CCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCEEEEEC RERTIESRLGPVPGVRDGVVVRPLGEVLAELMTGRTPSDRFRDAYGQGEKTFVVRRWYE CCHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA