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The map label for this gene is 39998504

Identifier: 39998504

GI number: 39998504

Start: 3757472

End: 3758890

Strand: Direct

Name: 39998504

Synonym: GSU3415

Alternate gene names: NA

Gene position: 3757472-3758890 (Clockwise)

Preceding gene: 39998501

Following gene: 39998505

Centisome position: 98.51

GC content: 62.86

Gene sequence:

>1419_bases
GTGCGCATCCTCTTCGTTCACCCCCACGGCAGCAACTGGATGGGTGCCGGCAACGACATCACCGCCATCTTCAACCTCAT
GCCCCCCCTGGGGATGTTGAGCATCGCCGCGTTTCTGGAGGCGCGGGGCATGGAGGTGGAAATCATCGACTGCTACGGTA
CCGGCCGACGGGGACGGGACCTGGTGGATGAGATCGTCCGCCGGCGACCCGACGCAGTCGGGTTTTCCTGCACCACCTCG
TCGTTTCTCGAAGGGTACGCCCTGGCCGAGGGACTCAAGGAGTTGCTCCCGGACATCCCGGTGATCTTCGGCGGCGCCCA
CGCCTGTTCGGTGGGGGTGAGCCTTCTGGACCGGTTCCCGGCCATCGACTACCTGGTTCTGGGCGAAGGGGAACAGACCC
TGTACGAACTTGCTGCCGCGAGCTTTCGCAATGTGGAGAAAATTCCCGGCGTCGGCTACCGCCGTGACGGCGTCGGCACC
CTCTCTGCGGCCCGGGAGCTCATCGCCGACCTGGACACCCTTCCCTTTCCGGCCTACCACCGGCTTCCCGACTTCCCCCG
GCGCTACACCCTGCCCCTGTTCAGCTACCCCAAGGCTCCCAACACCAGTGTCATTTCGAGCCGCGGATGTCCCTACCAGT
GCTCCTACTGTGACCGGTCGGTCTTCAGCCGGGGCTTCCGCTTCAACTCGTCCGAGTACATTGTGGAGCACCTGGCCTAC
CTCAACCGGGACTTCGGCATCCGCCACGTCTTTTTCTACGACGATCTTTTCACCGCCGACCGGGGCCGCGTGGCCCGCTT
CTGCCAGTTGAAGGAGGCACGACGACTGCCGGTGACCTACAACTGCATCGCCCGCCTCGAACATGTGGATGCCGAGTTGT
TGGCGCTGCTGAAGCGTTCGGGCTGCTGGCAGGTGAATTTCGGCATTGAGTCCGGCGATCCGGAGGTGATCAAAAAGCAC
CGGAAGTACTACGGACTCGACGAGGTGCAGACCAAGCTGGCCATGGTCCGCCGGGCTGGGATGCGGGTGAAGGGGCTGTT
CATGCTGGGGCTGCCGGGAGAGTCGGCGGAATCCATCCGCCGGACCATCGATTATGCCCTGATGCTGCCCCTGGACGAGA
TCAACGTGACCAAGTTTACCCCCTTCCCCGGCGCGCCCATCTACGGGGGCATCAGGGAACAGGGGGAGTTCGACGAGAAC
TGGCCTCTCATGAACTGTATGAATTTCGTCTTCGTGCCCACGGGGATGAGCCGGGACCAACTGGAGGAGCTCTACAACGA
GTTCATCCGGCGCTTCTACCGCCGGACCCGCATCCACTGGGGATACACGCAGATGCTCTGGAAGTCGCCCGACAGCATCC
TCAGATTCCTGCGCCACCTGCCGGAGATTCTGGCCTTCGAGATGAAGCAGAAGTGGTAA

Upstream 100 bases:

>100_bases
TCCTGCTAAGGAGAACAGTTGACAGAGGCATGACCGCTCTCTACTCTTGAAGGGATATGGCAGTAACCTGACCGGCGCCG
ACCGGCGCCCCGAGGACCAC

Downstream 100 bases:

>100_bases
AGGTGATGCGGCAAGGCATCAGCGAGGTGTCCATGAAACGTTACGCTATGATCCTGCTCCTGGTGGCAGGCCAGTTGCTC
TCGGCAGGCGCCGGACATGG

Product: radical SAM domain/B12 binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MRILFVHPHGSNWMGAGNDITAIFNLMPPLGMLSIAAFLEARGMEVEIIDCYGTGRRGRDLVDEIVRRRPDAVGFSCTTS
SFLEGYALAEGLKELLPDIPVIFGGAHACSVGVSLLDRFPAIDYLVLGEGEQTLYELAAASFRNVEKIPGVGYRRDGVGT
LSAARELIADLDTLPFPAYHRLPDFPRRYTLPLFSYPKAPNTSVISSRGCPYQCSYCDRSVFSRGFRFNSSEYIVEHLAY
LNRDFGIRHVFFYDDLFTADRGRVARFCQLKEARRLPVTYNCIARLEHVDAELLALLKRSGCWQVNFGIESGDPEVIKKH
RKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIRRTIDYALMLPLDEINVTKFTPFPGAPIYGGIREQGEFDEN
WPLMNCMNFVFVPTGMSRDQLEELYNEFIRRFYRRTRIHWGYTQMLWKSPDSILRFLRHLPEILAFEMKQKW

Sequences:

>Translated_472_residues
MRILFVHPHGSNWMGAGNDITAIFNLMPPLGMLSIAAFLEARGMEVEIIDCYGTGRRGRDLVDEIVRRRPDAVGFSCTTS
SFLEGYALAEGLKELLPDIPVIFGGAHACSVGVSLLDRFPAIDYLVLGEGEQTLYELAAASFRNVEKIPGVGYRRDGVGT
LSAARELIADLDTLPFPAYHRLPDFPRRYTLPLFSYPKAPNTSVISSRGCPYQCSYCDRSVFSRGFRFNSSEYIVEHLAY
LNRDFGIRHVFFYDDLFTADRGRVARFCQLKEARRLPVTYNCIARLEHVDAELLALLKRSGCWQVNFGIESGDPEVIKKH
RKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIRRTIDYALMLPLDEINVTKFTPFPGAPIYGGIREQGEFDEN
WPLMNCMNFVFVPTGMSRDQLEELYNEFIRRFYRRTRIHWGYTQMLWKSPDSILRFLRHLPEILAFEMKQKW
>Mature_472_residues
MRILFVHPHGSNWMGAGNDITAIFNLMPPLGMLSIAAFLEARGMEVEIIDCYGTGRRGRDLVDEIVRRRPDAVGFSCTTS
SFLEGYALAEGLKELLPDIPVIFGGAHACSVGVSLLDRFPAIDYLVLGEGEQTLYELAAASFRNVEKIPGVGYRRDGVGT
LSAARELIADLDTLPFPAYHRLPDFPRRYTLPLFSYPKAPNTSVISSRGCPYQCSYCDRSVFSRGFRFNSSEYIVEHLAY
LNRDFGIRHVFFYDDLFTADRGRVARFCQLKEARRLPVTYNCIARLEHVDAELLALLKRSGCWQVNFGIESGDPEVIKKH
RKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIRRTIDYALMLPLDEINVTKFTPFPGAPIYGGIREQGEFDEN
WPLMNCMNFVFVPTGMSRDQLEELYNEFIRRFYRRTRIHWGYTQMLWKSPDSILRFLRHLPEILAFEMKQKW

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53966; Mature: 53966

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFVHPHGSNWMGAGNDITAIFNLMPPLGMLSIAAFLEARGMEVEIIDCYGTGRRGRD
CEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHH
LVDEIVRRRPDAVGFSCTTSSFLEGYALAEGLKELLPDIPVIFGGAHACSVGVSLLDRFP
HHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCC
AIDYLVLGEGEQTLYELAAASFRNVEKIPGVGYRRDGVGTLSAARELIADLDTLPFPAYH
CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
RLPDFPRRYTLPLFSYPKAPNTSVISSRGCPYQCSYCDRSVFSRGFRFNSSEYIVEHLAY
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
LNRDFGIRHVFFYDDLFTADRGRVARFCQLKEARRLPVTYNCIARLEHVDAELLALLKRS
HCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHC
GCWQVNFGIESGDPEVIKKHRKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIR
CCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
RTIDYALMLPLDEINVTKFTPFPGAPIYGGIREQGEFDENWPLMNCMNFVFVPTGMSRDQ
HHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCHHH
LEELYNEFIRRFYRRTRIHWGYTQMLWKSPDSILRFLRHLPEILAFEMKQKW
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRILFVHPHGSNWMGAGNDITAIFNLMPPLGMLSIAAFLEARGMEVEIIDCYGTGRRGRD
CEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHH
LVDEIVRRRPDAVGFSCTTSSFLEGYALAEGLKELLPDIPVIFGGAHACSVGVSLLDRFP
HHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCC
AIDYLVLGEGEQTLYELAAASFRNVEKIPGVGYRRDGVGTLSAARELIADLDTLPFPAYH
CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
RLPDFPRRYTLPLFSYPKAPNTSVISSRGCPYQCSYCDRSVFSRGFRFNSSEYIVEHLAY
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
LNRDFGIRHVFFYDDLFTADRGRVARFCQLKEARRLPVTYNCIARLEHVDAELLALLKRS
HCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHC
GCWQVNFGIESGDPEVIKKHRKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIR
CCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
RTIDYALMLPLDEINVTKFTPFPGAPIYGGIREQGEFDENWPLMNCMNFVFVPTGMSRDQ
HHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCHHH
LEELYNEFIRRFYRRTRIHWGYTQMLWKSPDSILRFLRHLPEILAFEMKQKW
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]