| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998505
Identifier: 39998505
GI number: 39998505
Start: 3758896
End: 3759513
Strand: Direct
Name: 39998505
Synonym: GSU3416
Alternate gene names: NA
Gene position: 3758896-3759513 (Clockwise)
Preceding gene: 39998504
Following gene: 39998506
Centisome position: 98.55
GC content: 66.02
Gene sequence:
>618_bases ATGCGGCAAGGCATCAGCGAGGTGTCCATGAAACGTTACGCTATGATCCTGCTCCTGGTGGCAGGCCAGTTGCTCTCGGC AGGCGCCGGACATGGAGAAGAGCCGGCCGTGCGGACCGCATCCGGCGAGTTCGCCATCCTGGGGGGCTATGGCATCACCC ACCGGGGGTTCGGCGCCACCCGCACCCAGGTGGAAACGGTGGATGCCATCCTGCGCTACGGGCACTTCCTCTCGGGAGAG CTGGGCACCGGCCGCTGGTTCCAGGGGCGCCACGAACTGCTGGTGGAAGTGCCGCTCCACCTGACCCTGGACCCGCGCGT GCGGACCATGACCGGCGGCTACCTCCTGGGCAGCTGGAAATTCACCTCCCTTGAGGGGCTGGCCCCCTATGTCTTCGCCG GCGGCGGCATCCTCTACAACGACCTGGGACTCGACACCCAGGGGACGCGGCTCAATTTTTCCTACCAGGGGGGGACGGGG CTCCAGTGGTTCGTGCGGCCGGACACGGCCCTGGGAATCGAGTACCGCTATCACCACGTCTCCAACGCCGGCACCGCCGA ACCCAACGAGCCTCTGAATTCGAGCAAGTTTCTGCTGGGGGTATCGGTCTACCGGTAG
Upstream 100 bases:
>100_bases ACACGCAGATGCTCTGGAAGTCGCCCGACAGCATCCTCAGATTCCTGCGCCACCTGCCGGAGATTCTGGCCTTCGAGATG AAGCAGAAGTGGTAAAGGTG
Downstream 100 bases:
>100_bases GTACGCCATGAACAGAAGGGACTTCCTTAAAACCGCCGGACTGACCGGCATCGCCCTGGGGCTCCCCGGCTGCGCCCGGA GCCTCCCCTTCGGCCGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MRQGISEVSMKRYAMILLLVAGQLLSAGAGHGEEPAVRTASGEFAILGGYGITHRGFGATRTQVETVDAILRYGHFLSGE LGTGRWFQGRHELLVEVPLHLTLDPRVRTMTGGYLLGSWKFTSLEGLAPYVFAGGGILYNDLGLDTQGTRLNFSYQGGTG LQWFVRPDTALGIEYRYHHVSNAGTAEPNEPLNSSKFLLGVSVYR
Sequences:
>Translated_205_residues MRQGISEVSMKRYAMILLLVAGQLLSAGAGHGEEPAVRTASGEFAILGGYGITHRGFGATRTQVETVDAILRYGHFLSGE LGTGRWFQGRHELLVEVPLHLTLDPRVRTMTGGYLLGSWKFTSLEGLAPYVFAGGGILYNDLGLDTQGTRLNFSYQGGTG LQWFVRPDTALGIEYRYHHVSNAGTAEPNEPLNSSKFLLGVSVYR >Mature_205_residues MRQGISEVSMKRYAMILLLVAGQLLSAGAGHGEEPAVRTASGEFAILGGYGITHRGFGATRTQVETVDAILRYGHFLSGE LGTGRWFQGRHELLVEVPLHLTLDPRVRTMTGGYLLGSWKFTSLEGLAPYVFAGGGILYNDLGLDTQGTRLNFSYQGGTG LQWFVRPDTALGIEYRYHHVSNAGTAEPNEPLNSSKFLLGVSVYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22323; Mature: 22323
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQGISEVSMKRYAMILLLVAGQLLSAGAGHGEEPAVRTASGEFAILGGYGITHRGFGAT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCC RTQVETVDAILRYGHFLSGELGTGRWFQGRHELLVEVPLHLTLDPRVRTMTGGYLLGSWK HHHHHHHHHHHHHCHHCCCCCCCCCEECCCEEEEEEECEEEEECCCEEEEECCEEEEEEE FTSLEGLAPYVFAGGGILYNDLGLDTQGTRLNFSYQGGTGLQWFVRPDTALGIEYRYHHV ECCCCCCCCEEEECCCEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEEEE SNAGTAEPNEPLNSSKFLLGVSVYR CCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MRQGISEVSMKRYAMILLLVAGQLLSAGAGHGEEPAVRTASGEFAILGGYGITHRGFGAT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCC RTQVETVDAILRYGHFLSGELGTGRWFQGRHELLVEVPLHLTLDPRVRTMTGGYLLGSWK HHHHHHHHHHHHHCHHCCCCCCCCCEECCCEEEEEEECEEEEECCCEEEEECCEEEEEEE FTSLEGLAPYVFAGGGILYNDLGLDTQGTRLNFSYQGGTGLQWFVRPDTALGIEYRYHHV ECCCCCCCCEEEECCCEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEEEE SNAGTAEPNEPLNSSKFLLGVSVYR CCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA