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The map label for this gene is gatC

Identifier: 39998472

GI number: 39998472

Start: 3718983

End: 3719270

Strand: Reverse

Name: gatC

Synonym: GSU3383

Alternate gene names: 39998472

Gene position: 3719270-3718983 (Counterclockwise)

Preceding gene: 39998473

Following gene: 39998471

Centisome position: 97.51

GC content: 57.29

Gene sequence:

>288_bases
ATGAAGATCACGCGAACCGATGTCGAGCATGTGGCAACGCTTGCCCGCCTCGAGCTTACCGAGGATGAGAAGGACAGGTT
CACCGGCCAGCTCGACGCCATTCTCGCCTACGTGGAAAAGCTCAATGAGCTGGACACCGACGGCATTATTCCCACATCCC
ATGCCGTTCCAGTCGAAAACGCCTTCCGGGAGGACGAGGTTCGTCCTTCCATAGGCGTTGAAAACGCGCTGGCCAACGCT
CCTGACAGAGTGGAGGGTTTCTTCCGTGTGCCCCGAGTCATCGAATAA

Upstream 100 bases:

>100_bases
CGCGGCATGTGAAGAAGCCCCGCGTGCCTTGTCATTTTCCCCCAATCGTGCTACAAAATACCGCTCACCGCCCATGTTTT
TTCCCAAGGGAGACCACCCG

Downstream 100 bases:

>100_bases
AAATCCCACGAGTGAAGAGCTGGAGGCCGCCATCGAAGAGGTGCGGCGCCGTTTTGCCGAGCTTCCCGAGGGAACCTGCA
AGAAGCGGATTTTCTACAAT

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKITRTDVEHVATLARLELTEDEKDRFTGQLDAILAYVEKLNELDTDGIIPTSHAVPVENAFREDEVRPSIGVENALANA
PDRVEGFFRVPRVIE

Sequences:

>Translated_95_residues
MKITRTDVEHVATLARLELTEDEKDRFTGQLDAILAYVEKLNELDTDGIIPTSHAVPVENAFREDEVRPSIGVENALANA
PDRVEGFFRVPRVIE
>Mature_95_residues
MKITRTDVEHVATLARLELTEDEKDRFTGQLDAILAYVEKLNELDTDGIIPTSHAVPVENAFREDEVRPSIGVENALANA
PDRVEGFFRVPRVIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_GEOSL (Q746Y5)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_954423.1
- ProteinModelPortal:   Q746Y5
- SMR:   Q746Y5
- GeneID:   2688189
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU3383
- NMPDR:   fig|243231.1.peg.3361
- TIGR:   GSU3383
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   CLSK829260
- BioCyc:   GSUL243231:GSU_3383-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10675; Mature: 10675

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITRTDVEHVATLARLELTEDEKDRFTGQLDAILAYVEKLNELDTDGIIPTSHAVPVEN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
AFREDEVRPSIGVENALANAPDRVEGFFRVPRVIE
HHCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKITRTDVEHVATLARLELTEDEKDRFTGQLDAILAYVEKLNELDTDGIIPTSHAVPVEN
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
AFREDEVRPSIGVENALANAPDRVEGFFRVPRVIE
HHCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA