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The map label for this gene is ymdC [H]

Identifier: 39998473

GI number: 39998473

Start: 3719386

End: 3720963

Strand: Reverse

Name: ymdC [H]

Synonym: GSU3384

Alternate gene names: 39998473

Gene position: 3720963-3719386 (Counterclockwise)

Preceding gene: 39998475

Following gene: 39998472

Centisome position: 97.56

GC content: 63.69

Gene sequence:

>1578_bases
ATGGCAAGCAGGCAGAGGATCATGCCCTTCGGCAACACCAAGCAGTCACCGCGGGGAACCGTATGGCAACTCCAGCTCGC
CGTCGCCGCGCTGCTGGCCCTTGCCGTCGCACTGCTCACGCCCGGGCCGGGCGGAGCGCTGGGCGCTCCCGATGGCGTCA
CGCAGGGGGCGTCCCTGTCCCGGAGCATCCAGCCGCTCTTGGACGCCCATCCCGGGAAAACGGGCCTTCATGTTCTGGAG
AAGGGGGAGGAGTCGCTGCTGGCCCGGGCGTGGCTTGCCGACCACGCCACGGAGACCATTGATGTCCAGTATTTCATCTG
GAGCACTGACAATATTGGCATCCTGGCCTCGGAAGCCCTGCTGCGGGCGGCGGAGCGCGGGGTCAGGGTACGGGTGCTGG
TGGACGATCTGTTGATCGACGCCCCCCCTGAGTCACTCCTGGCCCTGGCCCGTCACCCGCGGATCGATATCCGGATCTAC
AATCCCACAATGACCGTGGGGACCTCGAAGGTTAAGCGCCTCGGTAATGTGGTGACCGGCTTCCGCTCGGTAAATCAGCG
GATGCACGACAAAACCGCCCTGTTCGACGGGGTGGTCGGCATCACGGGCGGGCGCAATATGGCCGACGAGTACTACGATT
ACGATCAGGAATACACCTTCCGGGACCGGGACATCCTGATGCTGGGGCCGGCGGTGGCCGAAGCGGAGGCCAGCTTCGCC
AGGTTCTGGGAAAGCCCCCTTGCGGTACCGGTGGAAAAGCTCCTGAAAAAGGGTATGAAGAAGATGACGCCGGAGCGGAC
GGCCCGGGTTTATGCCGATCTCCACGCCTATGCCGGCAAGCCGGAGAACTTTGCGTCGGAGGTGCGCCAGGCGCTGCGTG
ACCTGCCCGACAGGTTCGACGGGCTGCTGCGGGAGATGGTGTGGGACGAAGCCCGCTTCATTTCCGATCTGCCGGGCAAG
AACAGCGGCCGCGATGGGCTCGGGGGCGGCGGCCAGAGCACTACCGCCCTGGTTGAAGCGGTGCGCAGCGCCAAGCGGCG
GGTCACCATCCAATCTCCCTATCTCGTGATGCCGGCGGGAGGGTTGGAGCTGTTCCGCGCGCTGGTTGAGCGGGGGGTAG
AGGTACGGATCGTCACCAATTCCCTGGCTGCAACCGACAACCTTCAGGCATTCAGCGGGTACCGAAAGCAGCGGGAAAAA
CTTTTACGGGCAGGGATCACCATCCGGGAATTCCGTCCCGACCCGGCCGTGCTAAAGGAACTGATCGACCGTTACCCGAA
GCTGAAGAAAAAGCCCCCCACCTTCGCTCTCCATGCCAAGACCCTGGTAATCGACGGTGAAACTCTCTACGTCGGCACCT
TCAATCTGGACCCGCGTTCCGCCAACCTGAACACTGAGGTCGGGATCCTGGTCACCAGTCCGACTCTGGCCCGGCGGGTG
GAAGAGCGGATCGAGCGTGACATGCTGCCGGAAAACAGCTGGAATCCAGCCACGGACAACCCCGACCGGTACGCTTCGGC
GGCCAAGCGTAGCAAAATGCGCTTCTGGAAGTCCCTGCCGCTGGATCCGATTCTGTGA

Upstream 100 bases:

>100_bases
CCCCCGCCGGCCGGCGGGACGGTGATCGGCACGAGAAGCTCATGGCGGAACCGGCGGGGAGCAGAGGAGATGTGAGCGCT
ACCAGCGGGAGGGAGCACTG

Downstream 100 bases:

>100_bases
GCCGACGTAGGCGCGCGCGGCATGTGAAGAAGCCCCGCGTGCCTTGTCATTTTCCCCCAATCGTGCTACAAAATACCGCT
CACCGCCCATGTTTTTTCCC

Product: cardiolipin synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MASRQRIMPFGNTKQSPRGTVWQLQLAVAALLALAVALLTPGPGGALGAPDGVTQGASLSRSIQPLLDAHPGKTGLHVLE
KGEESLLARAWLADHATETIDVQYFIWSTDNIGILASEALLRAAERGVRVRVLVDDLLIDAPPESLLALARHPRIDIRIY
NPTMTVGTSKVKRLGNVVTGFRSVNQRMHDKTALFDGVVGITGGRNMADEYYDYDQEYTFRDRDILMLGPAVAEAEASFA
RFWESPLAVPVEKLLKKGMKKMTPERTARVYADLHAYAGKPENFASEVRQALRDLPDRFDGLLREMVWDEARFISDLPGK
NSGRDGLGGGGQSTTALVEAVRSAKRRVTIQSPYLVMPAGGLELFRALVERGVEVRIVTNSLAATDNLQAFSGYRKQREK
LLRAGITIREFRPDPAVLKELIDRYPKLKKKPPTFALHAKTLVIDGETLYVGTFNLDPRSANLNTEVGILVTSPTLARRV
EERIERDMLPENSWNPATDNPDRYASAAKRSKMRFWKSLPLDPIL

Sequences:

>Translated_525_residues
MASRQRIMPFGNTKQSPRGTVWQLQLAVAALLALAVALLTPGPGGALGAPDGVTQGASLSRSIQPLLDAHPGKTGLHVLE
KGEESLLARAWLADHATETIDVQYFIWSTDNIGILASEALLRAAERGVRVRVLVDDLLIDAPPESLLALARHPRIDIRIY
NPTMTVGTSKVKRLGNVVTGFRSVNQRMHDKTALFDGVVGITGGRNMADEYYDYDQEYTFRDRDILMLGPAVAEAEASFA
RFWESPLAVPVEKLLKKGMKKMTPERTARVYADLHAYAGKPENFASEVRQALRDLPDRFDGLLREMVWDEARFISDLPGK
NSGRDGLGGGGQSTTALVEAVRSAKRRVTIQSPYLVMPAGGLELFRALVERGVEVRIVTNSLAATDNLQAFSGYRKQREK
LLRAGITIREFRPDPAVLKELIDRYPKLKKKPPTFALHAKTLVIDGETLYVGTFNLDPRSANLNTEVGILVTSPTLARRV
EERIERDMLPENSWNPATDNPDRYASAAKRSKMRFWKSLPLDPIL
>Mature_524_residues
ASRQRIMPFGNTKQSPRGTVWQLQLAVAALLALAVALLTPGPGGALGAPDGVTQGASLSRSIQPLLDAHPGKTGLHVLEK
GEESLLARAWLADHATETIDVQYFIWSTDNIGILASEALLRAAERGVRVRVLVDDLLIDAPPESLLALARHPRIDIRIYN
PTMTVGTSKVKRLGNVVTGFRSVNQRMHDKTALFDGVVGITGGRNMADEYYDYDQEYTFRDRDILMLGPAVAEAEASFAR
FWESPLAVPVEKLLKKGMKKMTPERTARVYADLHAYAGKPENFASEVRQALRDLPDRFDGLLREMVWDEARFISDLPGKN
SGRDGLGGGGQSTTALVEAVRSAKRRVTIQSPYLVMPAGGLELFRALVERGVEVRIVTNSLAATDNLQAFSGYRKQREKL
LRAGITIREFRPDPAVLKELIDRYPKLKKKPPTFALHAKTLVIDGETLYVGTFNLDPRSANLNTEVGILVTSPTLARRVE
ERIERDMLPENSWNPATDNPDRYASAAKRSKMRFWKSLPLDPIL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=432, Percent_Identity=36.3425925925926, Blast_Score=238, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58083; Mature: 57952

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRQRIMPFGNTKQSPRGTVWQLQLAVAALLALAVALLTPGPGGALGAPDGVTQGASLS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
RSIQPLLDAHPGKTGLHVLEKGEESLLARAWLADHATETIDVQYFIWSTDNIGILASEAL
HHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHH
LRAAERGVRVRVLVDDLLIDAPPESLLALARHPRIDIRIYNPTMTVGTSKVKRLGNVVTG
HHHHHCCCEEEEEEEHHHCCCCHHHHHHHHHCCCEEEEEECCEEECCHHHHHHHHHHHHH
FRSVNQRMHDKTALFDGVVGITGGRNMADEYYDYDQEYTFRDRDILMLGPAVAEAEASFA
HHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHCCCCCEEECCCCEEEECCHHHHHHHHHH
RFWESPLAVPVEKLLKKGMKKMTPERTARVYADLHAYAGKPENFASEVRQALRDLPDRFD
HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLLREMVWDEARFISDLPGKNSGRDGLGGGGQSTTALVEAVRSAKRRVTIQSPYLVMPAG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEECCC
GLELFRALVERGVEVRIVTNSLAATDNLQAFSGYRKQREKLLRAGITIREFRPDPAVLKE
HHHHHHHHHHCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHH
LIDRYPKLKKKPPTFALHAKTLVIDGETLYVGTFNLDPRSANLNTEVGILVTSPTLARRV
HHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEECHHHHHHH
EERIERDMLPENSWNPATDNPDRYASAAKRSKMRFWKSLPLDPIL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASRQRIMPFGNTKQSPRGTVWQLQLAVAALLALAVALLTPGPGGALGAPDGVTQGASLS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
RSIQPLLDAHPGKTGLHVLEKGEESLLARAWLADHATETIDVQYFIWSTDNIGILASEAL
HHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHH
LRAAERGVRVRVLVDDLLIDAPPESLLALARHPRIDIRIYNPTMTVGTSKVKRLGNVVTG
HHHHHCCCEEEEEEEHHHCCCCHHHHHHHHHCCCEEEEEECCEEECCHHHHHHHHHHHHH
FRSVNQRMHDKTALFDGVVGITGGRNMADEYYDYDQEYTFRDRDILMLGPAVAEAEASFA
HHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHCCCCCEEECCCCEEEECCHHHHHHHHHH
RFWESPLAVPVEKLLKKGMKKMTPERTARVYADLHAYAGKPENFASEVRQALRDLPDRFD
HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLLREMVWDEARFISDLPGKNSGRDGLGGGGQSTTALVEAVRSAKRRVTIQSPYLVMPAG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEECCC
GLELFRALVERGVEVRIVTNSLAATDNLQAFSGYRKQREKLLRAGITIREFRPDPAVLKE
HHHHHHHHHHCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHH
LIDRYPKLKKKPPTFALHAKTLVIDGETLYVGTFNLDPRSANLNTEVGILVTSPTLARRV
HHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEECHHHHHHH
EERIERDMLPENSWNPATDNPDRYASAAKRSKMRFWKSLPLDPIL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]