| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998378
Identifier: 39998378
GI number: 39998378
Start: 3608359
End: 3608856
Strand: Direct
Name: 39998378
Synonym: GSU3289
Alternate gene names: NA
Gene position: 3608359-3608856 (Clockwise)
Preceding gene: 39998377
Following gene: 39998381
Centisome position: 94.6
GC content: 54.42
Gene sequence:
>498_bases ATGGGTAAGGAATATTCGGTACAGGAAGCTCTTAAGCTGGCAATCAAGGGTGAAAAGGACAGCATGGACTTCTACCGCAA GGCAGCGACCGTTACCAAGAATGAGCGGGCCAGGAAAGTCTTCGACCTGCTCGCCAATGAAGAAGTCGGCCACCTCAAGG CATTCTTCGACCACTACAAGGGGGGCGATTTCGGCGACATCACCGTCTACATGGCCCAGCCGGTCGACACCAAGAATCCG ACCTACATGGCGCTCGTGAAGGCCATCGACGAAGAAACCCACGAGCAGAAAGCGCTCGAAATCGCCCTGAAAGAGGAAAA GGCCTGCATCGACCAGTACACCGTCCTTGCCAAGGACATTATCGATCCCTTGGTCAAGGGAATCTTCCAACAGGTCATCA AGGAGACGGAAAAGCATCTGGCGCTGATCGAGGAGGAGTATCGGCACGTCATGACCATGGTCCACGAATCGGACCAGGAC ACGTACGTGCGGGAATAA
Upstream 100 bases:
>100_bases GAGCCCCGTTGAAAATTGCGTTGACCGGTTGAACGGCGCACAAGTGCCGCTATACTGTGTTTACACAATCGATATGATGG GATGAAAGGAGGAATACTTC
Downstream 100 bases:
>100_bases TCGAAGAGAACACCGGCGTTCTTTACCATCATGAAAAGAGCGGCCCCGCATCGAGGGGTCGCTCTTTTCGCGTCATGAAT TCGTGCGGGCCAAGCTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYKGGDFGDITVYMAQPVDTKNP TYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDIIDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQD TYVRE
Sequences:
>Translated_165_residues MGKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYKGGDFGDITVYMAQPVDTKNP TYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDIIDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQD TYVRE >Mature_164_residues GKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYKGGDFGDITVYMAQPVDTKNPT YMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDIIDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQDT YVRE
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19004; Mature: 18873
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYK CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC GGDFGDITVYMAQPVDTKNPTYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDI CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQDTYVRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GKEYSVQEALKLAIKGEKDSMDFYRKAATVTKNERARKVFDLLANEEVGHLKAFFDHYK CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC GGDFGDITVYMAQPVDTKNPTYMALVKAIDEETHEQKALEIALKEEKACIDQYTVLAKDI CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDPLVKGIFQQVIKETEKHLALIEEEYRHVMTMVHESDQDTYVRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA