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The map label for this gene is 39998366

Identifier: 39998366

GI number: 39998366

Start: 3594416

End: 3595123

Strand: Reverse

Name: 39998366

Synonym: GSU3277

Alternate gene names: NA

Gene position: 3595123-3594416 (Counterclockwise)

Preceding gene: 39998367

Following gene: 39998363

Centisome position: 94.26

GC content: 62.99

Gene sequence:

>708_bases
ATGAAGAGCGCACTCAGGGTTGTTTCCGCCTCCCTCGTCCTCTCCATGGCCTCCCTGGCGGCCGGCGGGGAATACCTTCT
CTATACGCCCGGGGCTTCGGAAGGGAGCCGTCCTTCGGGCCCGGACGAGGGAGTGCTCGTCAAGAGCATTACCGTCCAGA
AGGGGGATACCCTGTATTCCCTCTCCCGCAAGTACAACGGTAAGGGCGGGTACTACCCCCAGATACTTCTCTTCAACGAA
ATCAAGAACCCCGACCTTATCTACGCCGGCAATAAACTCATGGTGCCGGTGGCCCCGGCCGGTCCGAAAGCGGTGTTCAG
CCAACAGCCCTCCGCTGTTCCGGCCGCCGCGGCAAAAAGAGAGTCAGCCGTTCGCCCCGCCCGGGAGAAGGTTGCGCCGG
TCGCGGCCCACCGGGAGGCAAAGCGGGAGTCCACTGTGACCACATCCGTGCGGACGCCGGAACCAGCGGCCGCCACCCCC
CCCGTGCCTTCGCGGCCTGCGGCGGAAGCGCACCGACCTCAAACGGGAAAGGCGGATGATAACGAGCACTCTCTCTACGA
GAAAGGAGTGAGCGCATACAAGTCAGGAGCCTATTCGCAGTCCGTTGAGCTGTTCGAGCGCTTCCTGGCCCGTTATCCGT
CCTCTCCACTGGTCCCCGATGCAACGCTCTATCGTGCGGATGCCTTCCTCAAGATGGCCGGTCAGTAA

Upstream 100 bases:

>100_bases
AAGGTAACGTTCCGCGTCCGTTCGGGCACAGCCGTGGGAACGAGCATCCAGGTCAAGAATGTCCTGAAGTATCAAGACCA
GTTGGGGAACAGGTACTGAT

Downstream 100 bases:

>100_bases
CGCTCTAACCACTCAGCCGAACGGCAGGCGGTTCATATGCAAAGAGGGGGGTGTCCCGACGGACGCCCCCCTCTTTGCAT
TTTCTGCCCTATGCTGCTAG

Product: lysM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKSALRVVSASLVLSMASLAAGGEYLLYTPGASEGSRPSGPDEGVLVKSITVQKGDTLYSLSRKYNGKGGYYPQILLFNE
IKNPDLIYAGNKLMVPVAPAGPKAVFSQQPSAVPAAAAKRESAVRPAREKVAPVAAHREAKRESTVTTSVRTPEPAAATP
PVPSRPAAEAHRPQTGKADDNEHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKMAGQ

Sequences:

>Translated_235_residues
MKSALRVVSASLVLSMASLAAGGEYLLYTPGASEGSRPSGPDEGVLVKSITVQKGDTLYSLSRKYNGKGGYYPQILLFNE
IKNPDLIYAGNKLMVPVAPAGPKAVFSQQPSAVPAAAAKRESAVRPAREKVAPVAAHREAKRESTVTTSVRTPEPAAATP
PVPSRPAAEAHRPQTGKADDNEHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKMAGQ
>Mature_235_residues
MKSALRVVSASLVLSMASLAAGGEYLLYTPGASEGSRPSGPDEGVLVKSITVQKGDTLYSLSRKYNGKGGYYPQILLFNE
IKNPDLIYAGNKLMVPVAPAGPKAVFSQQPSAVPAAAAKRESAVRPAREKVAPVAAHREAKRESTVTTSVRTPEPAAATP
PVPSRPAAEAHRPQTGKADDNEHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKMAGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24963; Mature: 24963

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSALRVVSASLVLSMASLAAGGEYLLYTPGASEGSRPSGPDEGVLVKSITVQKGDTLYS
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE
LSRKYNGKGGYYPQILLFNEIKNPDLIYAGNKLMVPVAPAGPKAVFSQQPSAVPAAAAKR
HHHHCCCCCCCCCEEEEEECCCCCCEEEECCEEEEEECCCCCHHHHCCCCCCCCHHHHHH
ESAVRPAREKVAPVAAHREAKRESTVTTSVRTPEPAAATPPVPSRPAAEAHRPQTGKADD
HHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NEHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKMAGQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSALRVVSASLVLSMASLAAGGEYLLYTPGASEGSRPSGPDEGVLVKSITVQKGDTLYS
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEE
LSRKYNGKGGYYPQILLFNEIKNPDLIYAGNKLMVPVAPAGPKAVFSQQPSAVPAAAAKR
HHHHCCCCCCCCCEEEEEECCCCCCEEEECCEEEEEECCCCCHHHHCCCCCCCCHHHHHH
ESAVRPAREKVAPVAAHREAKRESTVTTSVRTPEPAAATPPVPSRPAAEAHRPQTGKADD
HHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NEHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKMAGQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA