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The map label for this gene is 39998363

Identifier: 39998363

GI number: 39998363

Start: 3590746

End: 3591168

Strand: Reverse

Name: 39998363

Synonym: GSU3274

Alternate gene names: NA

Gene position: 3591168-3590746 (Counterclockwise)

Preceding gene: 39998366

Following gene: 39998362

Centisome position: 94.15

GC content: 57.21

Gene sequence:

>423_bases
ATGGGCCTTTTGGTTGCGGCTACCGCATGGGGTGGCGAGGTGACCTATCGCAAGGACATCAAGCCGATCTTCGATGTCAG
GTGTGCAGGCTGCCATGGCGCGGATGCTGCCCCCGAATACCACGCCTTCAAGGCCGAGAAGGAAAAATGGCTTGCCAAGG
GGCAGGGGATGCGGATGGACACATACAGCCACCTGATTTTTTATACGGCGTGGCCTGACACCGGCGCCCTCATGCGCAGG
CTTGACGACGGCAAAAACAGCAAGGATGCCAAGCCGGGGAATATGTACCGGCATCTCGGTGCCACCGAGGAAGAACGACA
AAGAAACCTCGCGGTTTTCAAGGCGTGGGTCGGGGTCTGGAATCTCAAAAAATGGCCCGACATTACCAAGGAAGAGCTTA
ACGCCATCACGGTCACGTACTGA

Upstream 100 bases:

>100_bases
AAACATTGACAACATATCCCCGGCCTTGTTAAAAGTGAAAAACATTTTCAAATTCAACAAGGGGTCCACGGTGCAAAAAA
CAACTATTCTTTCGCTTGTT

Downstream 100 bases:

>100_bases
CGAGGGAAAGGGGTTGCCATGGGGCAGATGATTTCGGAAATGCGGCACGGTGTCCGGCGGCCGGTCTGGCACGATCTGGC
GGAACGGTTCGATGAGCCCC

Product: cytochrome C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGLLVAATAWGGEVTYRKDIKPIFDVRCAGCHGADAAPEYHAFKAEKEKWLAKGQGMRMDTYSHLIFYTAWPDTGALMRR
LDDGKNSKDAKPGNMYRHLGATEEERQRNLAVFKAWVGVWNLKKWPDITKEELNAITVTY

Sequences:

>Translated_140_residues
MGLLVAATAWGGEVTYRKDIKPIFDVRCAGCHGADAAPEYHAFKAEKEKWLAKGQGMRMDTYSHLIFYTAWPDTGALMRR
LDDGKNSKDAKPGNMYRHLGATEEERQRNLAVFKAWVGVWNLKKWPDITKEELNAITVTY
>Mature_139_residues
GLLVAATAWGGEVTYRKDIKPIFDVRCAGCHGADAAPEYHAFKAEKEKWLAKGQGMRMDTYSHLIFYTAWPDTGALMRRL
DDGKNSKDAKPGNMYRHLGATEEERQRNLAVFKAWVGVWNLKKWPDITKEELNAITVTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15908; Mature: 15777

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLVAATAWGGEVTYRKDIKPIFDVRCAGCHGADAAPEYHAFKAEKEKWLAKGQGMRMD
CCEEEEEECCCCCEEECCCCCHHHCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE
TYSHLIFYTAWPDTGALMRRLDDGKNSKDAKPGNMYRHLGATEEERQRNLAVFKAWVGVW
CCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHC
NLKKWPDITKEELNAITVTY
CCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
GLLVAATAWGGEVTYRKDIKPIFDVRCAGCHGADAAPEYHAFKAEKEKWLAKGQGMRMD
CEEEEEECCCCCEEECCCCCHHHCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE
TYSHLIFYTAWPDTGALMRRLDDGKNSKDAKPGNMYRHLGATEEERQRNLAVFKAWVGVW
CCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHC
NLKKWPDITKEELNAITVTY
CCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA