| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is glmM [H]
Identifier: 39998344
GI number: 39998344
Start: 3566149
End: 3568659
Strand: Direct
Name: glmM [H]
Synonym: GSU3254
Alternate gene names: 39998344
Gene position: 3566149-3568659 (Clockwise)
Preceding gene: 39998343
Following gene: 39998345
Centisome position: 93.5
GC content: 61.41
Gene sequence:
>2511_bases ATGAAAGCCGTGATCATGGCCGGCGGGTTCGGTACCCGCATCCAGCCCCTGACGAGCAGCATTCCGAAACCAATGATCCC CCTCCTCAACCGTCCGATCATGCTTCACATCGTGGAGCTGCTCAAAAAATACGAGATCACCGACTTGGTCATGCTCCTGT ACCATCAGCCGGCGGTCATCAAGAACTTCTTCCGCGACGGCACGGATTTCGGCGTCAAGATCACCTATGTGACCCCACTT CAGGACATGGGGACCGCCGGTGCCGTCAAGTGCGCCGAGAAGTATCTGGACGAACGGTTCATCGTCATCAGCGGCGACCT CCTCACCGACTTCAACCTTCAGAAAATCATCGACTTCCACGAGGAGAAAGAGGCCTTGGCCACCATCACCCTCACCTCGG TAAAAGATCCGCTCCAGTTCGGCGTGGTCATTACCGACAAGGAAAAGCGGATCTCCCAGTTCCTGGAGAAACCCGGCTGG GGCGAGGTGATCTCCGACACCATCAATACCGGCATCTACGTTCTGGAGCCGGAAATTTTCTCCCATATCCCGGCCGAGGA GAACTACGACTTCTCCCAGGACCTCTTCCCGAAGCTGCTGGAGAAGCAGCAGTCCCTGTTCGGCTACACCGCCAAAGGAT ACTGGCGGGATATCGGCAACACCGACTCCTACCGTGAGGCCCACCACGACATCTTCAAAGGGAAGGTGAACGTAAGGATC GACGAGCCGAAGCAGGATCTGGTGGGCAAGGATCTGCGGCTCGGCTCCGACGTGAACCTGGACGAGCATGTGACCCTGGA GGGGACGGTGGTCATCGGTGATAACTCCCAGGTCTTCGAGAGCGCCCACATCAAGGATACGGTGATTGGACGCAACTGCA CCATCGAGGCGGGGGTACGGCTCTCCCGCTGTGTGATCTGGGATAATGTCTACGTAAAGCGGGGGGCGAAGCTGAACGAC AGCGTCCTCTGCGGCAACGTCCGCGTGGGGAACGGCGTGGTGATGGAGGAGGGGGTCATCGTGGCCGACGACACCTCCAT CGGCGAAGAGTCCTACATCAAGCGCGACGTGAAGATCTGGCCGCGCAAGGTGATCGAGGCCGGGGCCACCGTCACCGGCA ACCTGATCTGGGGTGAGAAGTGGAAAAAAGCCCTGTTCGAGGGGGCCCTCATCAAGGGTCTCACCAACATGGAACTCACC CCCGAGTTCGTGGCTAAGCTGGGCTGCGCCTACGGCACGACCCTTCCCAAGGGGAGCTTCGTGATTTCCGGCCGCGACGC TTACCGCTCCTCCCGGATGCTCAAGCGGAGCTTCATCGGCGGCCTTCTCTCCTCCGGGGTCAACGTCCGCGACCTGACCA TGGTCCCGATGCCTGTGCTGCGCTACAAGCTCCGTTCCTTCGGGGAGGTGGGCGGCATCCAGTTCCGACAGGCTCTGGAT GACCCCGCCTCCACCGAAATCATCTTCCTGGACGGCGACGGCCTCGACTTCTCCAGCTCAATGGGCAAAAACGTGGAACG GATCTTCTTCAAGGAGAACTTCCGCCGGGCCCACCACACGGAGCCGGGGGGGCTCACGGAAATCCCCCAGCAGGTGATGG ATTTCTATCGTGAGGGATTCCTGCACGCCATCGGCAAGACGCCGCTCCAGAAAAAAGCGTTCAAGGTGGTCATCGACTTC AACCACTCGCCGGCCAGCCAACTCCTCCCCGGCATCCTTACTCAGATGGGGTGCGAAGTCATCAGCCTCAACGCGTACGT GGACGAGGAGCGGGGGGTCCAGGCCCTGTCGGATCGGGGGCAGAGTCTCTCGCAGCTTTCCAAGATCGTCGCCACTCTGG AGGCGAACGCCGGCTTCTGGCTCGACCCCACCGTGGAGGGAGTCATCATGGTCGACGAAACCGGGACGGTCCACGAGGGG GCCGACATCCTGCTGCTGATGGTCGGGCTCGCCCTTAAGGCCGGCGAAAAAGGGGTGTTCGCCATACCGGTCTCGGCACC CTCGGCCATCGAACGGATGGCCCAGGAACGGGGCTGCGCCGTTACCCGCACCAAGAGCGCCGACCGCTCCATGATCGAGG CGGCCCTCTCCTCGGAGGTCATCCTGGCCGGTTCCATGGATGGCCGCTTCGCCTTCCCCCGGTTCCAGGCAGCCTTCGAC GGCATGTTCGCCATCGCCAAGTCCATCGAGATGGCGGCCCGCAGCGGAGCGTCCATCTCGGCAACTGCCGCGGAAATCCC CCGTCGGGCCTTCCTTCACACCCGGGTCCCCTGCGTCTGGGACATGAAGGGTGGAATCATGCGTAAGATGAGCGAGGACA GCCTCGACAAGGAGGCAAGCTTCATCGACGGGATCAAGGTCCATTTCGGCGAGGACTGGGCCCTCGTCCTCCCCGACCAG TACCAGCCCCACGTCCACATCGTGGCCGAGGCCCGGGACCCCAAGGCCGCCCAGAAACTGCTGACCGAGTACCAGAAAAA AGTGGAGCAGTGGAAGAAGGAGCTGTCATAA
Upstream 100 bases:
>100_bases CGAACTGAAGGAAGAGGTCAAGCGAGTCCTGGCAAAGAGGAAGCCGGGCAAGGAATAACTCTCGCATTTCCCATTCAATA TCCATGCAAAGGAGCATCCT
Downstream 100 bases:
>100_bases ATGACGGAGCCGCTGCGCATCGTCTTTCTCTGGCATATGCACCAGCCGTACTACAAGGACCCGGTGAAGGGCGAGTACGC CCTTCCCTGGACCTATCTCC
Product: phosphoglucomutase/phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 836
Protein sequence:
>836_residues MKAVIMAGGFGTRIQPLTSSIPKPMIPLLNRPIMLHIVELLKKYEITDLVMLLYHQPAVIKNFFRDGTDFGVKITYVTPL QDMGTAGAVKCAEKYLDERFIVISGDLLTDFNLQKIIDFHEEKEALATITLTSVKDPLQFGVVITDKEKRISQFLEKPGW GEVISDTINTGIYVLEPEIFSHIPAEENYDFSQDLFPKLLEKQQSLFGYTAKGYWRDIGNTDSYREAHHDIFKGKVNVRI DEPKQDLVGKDLRLGSDVNLDEHVTLEGTVVIGDNSQVFESAHIKDTVIGRNCTIEAGVRLSRCVIWDNVYVKRGAKLND SVLCGNVRVGNGVVMEEGVIVADDTSIGEESYIKRDVKIWPRKVIEAGATVTGNLIWGEKWKKALFEGALIKGLTNMELT PEFVAKLGCAYGTTLPKGSFVISGRDAYRSSRMLKRSFIGGLLSSGVNVRDLTMVPMPVLRYKLRSFGEVGGIQFRQALD DPASTEIIFLDGDGLDFSSSMGKNVERIFFKENFRRAHHTEPGGLTEIPQQVMDFYREGFLHAIGKTPLQKKAFKVVIDF NHSPASQLLPGILTQMGCEVISLNAYVDEERGVQALSDRGQSLSQLSKIVATLEANAGFWLDPTVEGVIMVDETGTVHEG ADILLLMVGLALKAGEKGVFAIPVSAPSAIERMAQERGCAVTRTKSADRSMIEAALSSEVILAGSMDGRFAFPRFQAAFD GMFAIAKSIEMAARSGASISATAAEIPRRAFLHTRVPCVWDMKGGIMRKMSEDSLDKEASFIDGIKVHFGEDWALVLPDQ YQPHVHIVAEARDPKAAQKLLTEYQKKVEQWKKELS
Sequences:
>Translated_836_residues MKAVIMAGGFGTRIQPLTSSIPKPMIPLLNRPIMLHIVELLKKYEITDLVMLLYHQPAVIKNFFRDGTDFGVKITYVTPL QDMGTAGAVKCAEKYLDERFIVISGDLLTDFNLQKIIDFHEEKEALATITLTSVKDPLQFGVVITDKEKRISQFLEKPGW GEVISDTINTGIYVLEPEIFSHIPAEENYDFSQDLFPKLLEKQQSLFGYTAKGYWRDIGNTDSYREAHHDIFKGKVNVRI DEPKQDLVGKDLRLGSDVNLDEHVTLEGTVVIGDNSQVFESAHIKDTVIGRNCTIEAGVRLSRCVIWDNVYVKRGAKLND SVLCGNVRVGNGVVMEEGVIVADDTSIGEESYIKRDVKIWPRKVIEAGATVTGNLIWGEKWKKALFEGALIKGLTNMELT PEFVAKLGCAYGTTLPKGSFVISGRDAYRSSRMLKRSFIGGLLSSGVNVRDLTMVPMPVLRYKLRSFGEVGGIQFRQALD DPASTEIIFLDGDGLDFSSSMGKNVERIFFKENFRRAHHTEPGGLTEIPQQVMDFYREGFLHAIGKTPLQKKAFKVVIDF NHSPASQLLPGILTQMGCEVISLNAYVDEERGVQALSDRGQSLSQLSKIVATLEANAGFWLDPTVEGVIMVDETGTVHEG ADILLLMVGLALKAGEKGVFAIPVSAPSAIERMAQERGCAVTRTKSADRSMIEAALSSEVILAGSMDGRFAFPRFQAAFD GMFAIAKSIEMAARSGASISATAAEIPRRAFLHTRVPCVWDMKGGIMRKMSEDSLDKEASFIDGIKVHFGEDWALVLPDQ YQPHVHIVAEARDPKAAQKLLTEYQKKVEQWKKELS >Mature_836_residues MKAVIMAGGFGTRIQPLTSSIPKPMIPLLNRPIMLHIVELLKKYEITDLVMLLYHQPAVIKNFFRDGTDFGVKITYVTPL QDMGTAGAVKCAEKYLDERFIVISGDLLTDFNLQKIIDFHEEKEALATITLTSVKDPLQFGVVITDKEKRISQFLEKPGW GEVISDTINTGIYVLEPEIFSHIPAEENYDFSQDLFPKLLEKQQSLFGYTAKGYWRDIGNTDSYREAHHDIFKGKVNVRI DEPKQDLVGKDLRLGSDVNLDEHVTLEGTVVIGDNSQVFESAHIKDTVIGRNCTIEAGVRLSRCVIWDNVYVKRGAKLND SVLCGNVRVGNGVVMEEGVIVADDTSIGEESYIKRDVKIWPRKVIEAGATVTGNLIWGEKWKKALFEGALIKGLTNMELT PEFVAKLGCAYGTTLPKGSFVISGRDAYRSSRMLKRSFIGGLLSSGVNVRDLTMVPMPVLRYKLRSFGEVGGIQFRQALD DPASTEIIFLDGDGLDFSSSMGKNVERIFFKENFRRAHHTEPGGLTEIPQQVMDFYREGFLHAIGKTPLQKKAFKVVIDF NHSPASQLLPGILTQMGCEVISLNAYVDEERGVQALSDRGQSLSQLSKIVATLEANAGFWLDPTVEGVIMVDETGTVHEG ADILLLMVGLALKAGEKGVFAIPVSAPSAIERMAQERGCAVTRTKSADRSMIEAALSSEVILAGSMDGRFAFPRFQAAFD GMFAIAKSIEMAARSGASISATAAEIPRRAFLHTRVPCVWDMKGGIMRKMSEDSLDKEASFIDGIKVHFGEDWALVLPDQ YQPHVHIVAEARDPKAAQKLLTEYQKKVEQWKKELS
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=370, Percent_Identity=27.2972972972973, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI11761619, Length=378, Percent_Identity=26.984126984127, Blast_Score=153, Evalue=7e-37, Organism=Homo sapiens, GI31881779, Length=370, Percent_Identity=22.1621621621622, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI45447090, Length=370, Percent_Identity=22.1621621621622, Blast_Score=86, Evalue=2e-16, Organism=Escherichia coli, GI1788351, Length=239, Percent_Identity=27.1966527196653, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790224, Length=235, Percent_Identity=24.2553191489362, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1789566, Length=299, Percent_Identity=25.4180602006689, Blast_Score=63, Evalue=8e-11, Organism=Caenorhabditis elegans, GI133931050, Length=370, Percent_Identity=28.1081081081081, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17509979, Length=329, Percent_Identity=24.0121580547112, Blast_Score=90, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17509981, Length=316, Percent_Identity=23.1012658227848, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=377, Percent_Identity=30.5039787798408, Blast_Score=180, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6320417, Length=429, Percent_Identity=21.9114219114219, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI21355443, Length=376, Percent_Identity=28.4574468085106, Blast_Score=154, Evalue=3e-37, Organism=Drosophila melanogaster, GI24644084, Length=376, Percent_Identity=28.4574468085106, Blast_Score=154, Evalue=3e-37, Organism=Drosophila melanogaster, GI24653912, Length=383, Percent_Identity=24.2819843342037, Blast_Score=99, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 92602; Mature: 92602
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVIMAGGFGTRIQPLTSSIPKPMIPLLNRPIMLHIVELLKKYEITDLVMLLYHQPAVI CCEEEEECCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH KNFFRDGTDFGVKITYVTPLQDMGTAGAVKCAEKYLDERFIVISGDLLTDFNLQKIIDFH HHHHCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHCCEEEEEECCEECCCCHHHHHHHH EEKEALATITLTSVKDPLQFGVVITDKEKRISQFLEKPGWGEVISDTINTGIYVLEPEIF HHHHHEEEEEEECCCCCHHCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCEEEECHHHH SHIPAEENYDFSQDLFPKLLEKQQSLFGYTAKGYWRDIGNTDSYREAHHDIFKGKVNVRI HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCEEEEEE DEPKQDLVGKDLRLGSDVNLDEHVTLEGTVVIGDNSQVFESAHIKDTVIGRNCTIEAGVR CCCHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCCCEEECCCCEECCCCE LSRCVIWDNVYVKRGAKLNDSVLCGNVRVGNGVVMEEGVIVADDTSIGEESYIKRDVKIW EEEEEEECCHHEECCCCCCCCEEECCEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHH PRKVIEAGATVTGNLIWGEKWKKALFEGALIKGLTNMELTPEFVAKLGCAYGTTLPKGSF HHHHHHCCCCEEECEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCE VISGRDAYRSSRMLKRSFIGGLLSSGVNVRDLTMVPMPVLRYKLRSFGEVGGIQFRQALD EECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHCC DPASTEIIFLDGDGLDFSSSMGKNVERIFFKENFRRAHHTEPGGLTEIPQQVMDFYREGF CCCCEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LHAIGKTPLQKKAFKVVIDFNHSPASQLLPGILTQMGCEVISLNAYVDEERGVQALSDRG HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECHHCCHHHHHHCC QSLSQLSKIVATLEANAGFWLDPTVEGVIMVDETGTVHEGADILLLMVGLALKAGEKGVF HHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEE AIPVSAPSAIERMAQERGCAVTRTKSADRSMIEAALSSEVILAGSMDGRFAFPRFQAAFD EEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHH GMFAIAKSIEMAARSGASISATAAEIPRRAFLHTRVPCVWDMKGGIMRKMSEDSLDKEAS HHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCEEEECCCCHHHHHCHHCCHHHHH FIDGIKVHFGEDWALVLPDQYQPHVHIVAEARDPKAAQKLLTEYQKKVEQWKKELS HHCCEEEEECCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAVIMAGGFGTRIQPLTSSIPKPMIPLLNRPIMLHIVELLKKYEITDLVMLLYHQPAVI CCEEEEECCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH KNFFRDGTDFGVKITYVTPLQDMGTAGAVKCAEKYLDERFIVISGDLLTDFNLQKIIDFH HHHHCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHCCEEEEEECCEECCCCHHHHHHHH EEKEALATITLTSVKDPLQFGVVITDKEKRISQFLEKPGWGEVISDTINTGIYVLEPEIF HHHHHEEEEEEECCCCCHHCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCEEEECHHHH SHIPAEENYDFSQDLFPKLLEKQQSLFGYTAKGYWRDIGNTDSYREAHHDIFKGKVNVRI HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCEEEEEE DEPKQDLVGKDLRLGSDVNLDEHVTLEGTVVIGDNSQVFESAHIKDTVIGRNCTIEAGVR CCCHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCCCEEECCCCEECCCCE LSRCVIWDNVYVKRGAKLNDSVLCGNVRVGNGVVMEEGVIVADDTSIGEESYIKRDVKIW EEEEEEECCHHEECCCCCCCCEEECCEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHH PRKVIEAGATVTGNLIWGEKWKKALFEGALIKGLTNMELTPEFVAKLGCAYGTTLPKGSF HHHHHHCCCCEEECEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCE VISGRDAYRSSRMLKRSFIGGLLSSGVNVRDLTMVPMPVLRYKLRSFGEVGGIQFRQALD EECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHCC DPASTEIIFLDGDGLDFSSSMGKNVERIFFKENFRRAHHTEPGGLTEIPQQVMDFYREGF CCCCEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LHAIGKTPLQKKAFKVVIDFNHSPASQLLPGILTQMGCEVISLNAYVDEERGVQALSDRG HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECHHCCHHHHHHCC QSLSQLSKIVATLEANAGFWLDPTVEGVIMVDETGTVHEGADILLLMVGLALKAGEKGVF HHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEE AIPVSAPSAIERMAQERGCAVTRTKSADRSMIEAALSSEVILAGSMDGRFAFPRFQAAFD EEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHH GMFAIAKSIEMAARSGASISATAAEIPRRAFLHTRVPCVWDMKGGIMRKMSEDSLDKEAS HHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCEEEECCCCHHHHHCHHCCHHHHH FIDGIKVHFGEDWALVLPDQYQPHVHIVAEARDPKAAQKLLTEYQKKVEQWKKELS HHCCEEEEECCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]