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The map label for this gene is arlR [H]

Identifier: 39998343

GI number: 39998343

Start: 3565735

End: 3566106

Strand: Direct

Name: arlR [H]

Synonym: GSU3253

Alternate gene names: 39998343

Gene position: 3565735-3566106 (Clockwise)

Preceding gene: 39998342

Following gene: 39998344

Centisome position: 93.49

GC content: 58.33

Gene sequence:

>372_bases
ATGGCACGATTGTTGGTGGTTGACGACGAAAACAGCATCCGGCTGCTCTATTCTCAGGAGCTGGCCGAAGAGGGACATGA
GGTGGTGACCGCCGCCACGGCAGCCGAAGCGGTGGACAAGATCAGGGAGCACGAGTTCGACCTGATCGTGCTGGACATCA
AACTGAAAAACGAGAGCGGCCTCGACCTGCTGCAGAAGGTGGTCAAGGAGCGGCACAACCTGCCGGTGGTCCTCTGCACA
GCGTTCTCCTGCTTCAAGGATGACTTCTCCGCCTGGCTCGCCGACGGCTATGTGGTCAAATCCAGCGACCTGTCCGAACT
GAAGGAAGAGGTCAAGCGAGTCCTGGCAAAGAGGAAGCCGGGCAAGGAATAA

Upstream 100 bases:

>100_bases
ATCATGGAAAAACATGGCAACAGCCTCATCATCGAAACGCCTCCCGACGGGGGGGCCCGCTACGTGCTCAAACTACCGGT
AAACAGGGAGGAGGAACCCC

Downstream 100 bases:

>100_bases
CTCTCGCATTTCCCATTCAATATCCATGCAAAGGAGCATCCTATGAAAGCCGTGATCATGGCCGGCGGGTTCGGTACCCG
CATCCAGCCCCTGACGAGCA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MARLLVVDDENSIRLLYSQELAEEGHEVVTAATAAEAVDKIREHEFDLIVLDIKLKNESGLDLLQKVVKERHNLPVVLCT
AFSCFKDDFSAWLADGYVVKSSDLSELKEEVKRVLAKRKPGKE

Sequences:

>Translated_123_residues
MARLLVVDDENSIRLLYSQELAEEGHEVVTAATAAEAVDKIREHEFDLIVLDIKLKNESGLDLLQKVVKERHNLPVVLCT
AFSCFKDDFSAWLADGYVVKSSDLSELKEEVKRVLAKRKPGKE
>Mature_122_residues
ARLLVVDDENSIRLLYSQELAEEGHEVVTAATAAEAVDKIREHEFDLIVLDIKLKNESGLDLLQKVVKERHNLPVVLCTA
FSCFKDDFSAWLADGYVVKSSDLSELKEEVKRVLAKRKPGKE

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13869; Mature: 13738

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLLVVDDENSIRLLYSQELAEEGHEVVTAATAAEAVDKIREHEFDLIVLDIKLKNESG
CCEEEEEECCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
LDLLQKVVKERHNLPVVLCTAFSCFKDDFSAWLADGYVVKSSDLSELKEEVKRVLAKRKP
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCC
GKE
CCC
>Mature Secondary Structure 
ARLLVVDDENSIRLLYSQELAEEGHEVVTAATAAEAVDKIREHEFDLIVLDIKLKNESG
CEEEEEECCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
LDLLQKVVKERHNLPVVLCTAFSCFKDDFSAWLADGYVVKSSDLSELKEEVKRVLAKRKP
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCC
GKE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA