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The map label for this gene is 39998308

Identifier: 39998308

GI number: 39998308

Start: 3523993

End: 3525435

Strand: Direct

Name: 39998308

Synonym: GSU3218

Alternate gene names: NA

Gene position: 3523993-3525435 (Clockwise)

Preceding gene: 39998307

Following gene: 39998309

Centisome position: 92.39

GC content: 62.02

Gene sequence:

>1443_bases
ATGTTCCGCCTGCTTTTTGCCATAACCATCCTGCTGGCCCTGTCTCTGCCAGGAACAGCCCTGGCGCTCACCTGCACCAT
CAAGGGGTGCCACCCGTTCCTGCAGGACCTGAAGAACCTCCACGCGCCGGTCAAGGAGGGGAAATGTCTTTCCTGCCACG
TTCAGAAGGAAGAGATGCATCCCTATCCGGGACTGAAGGCGTTCGAGCTGAAGGCGAAAGGAGTCGACCTCTGCTACCTC
TGCCATGACAAGCTGGCCATGGGCCCCGTGGTCCACGGGCCGGTCAGGGACGGCGACTGCACCGCCTGTCACCGCTATCA
CGGGGCTTCCGGCCCCAAGCTCCTTGACATGGGCGAGGACCAGACGGCGTTCTGCACCGGCTGTCACGACGAGGGCGAGT
TCCGGCGCCACTATCAGCACGGGCCGGCAGCGGTCGGCGACTGTACGAGCTGTCACACCCACCACAGCTCCACGGAGAAA
AAGCTCCTCAAGGAGCAATCCCGACAACTCTGCCTCTCCTGCCATAATGACTTCGCCCAGACCATGGCTAAGGCACCCCG
GGTCCACCCGCCGGTGAGCAACGATGCCTGCACCTCGTGCCATAACCCGCACAGCTCGGCAAGCCAGTTCGTACTTAAGG
AAAAGATGCCCGACCTCTGCTATGGCTGCCATTCGGCCATGGCCACCAAGGTCCCGAACGTCAAGGTGCCCCACAAGCCC
ATCAGCCAGGCCAAGAGCTGCGGCAGCTGCCACTCGGCCCACTTCTCCCCGGCCAAGGGGCTGCTCGCCGTGGACCAGAA
GAATCTCTGCCTCGGATGCCACGGTCAGGACGGCCTCCACTCAAGCAAAGTATTCCGGGAGTATTCGGGACTGCCGCTGG
TAAACATGAAAAAAGCCCTGGACAAAAAATCCCAGCTACACGGCCCTATCAACGATGGTGCCTGCGCCGCCTGCCACTCG
CCCCACGGCAGCGACAATTTCCGCATGCTGGTCAAGAGCTACCCGGCTCCCTTCTACGTGCCGTACAAGGAAGGGCTCTA
CGACCTCTGCTTTTCGTGTCACGACAAGAGCATGCTCAAGTATCCCGACACCACGCTCTATACCAACTTCCGCAACGGCA
AGCAGAACCTCCATTACCTCCACGTGAGCGACAAGCGCAAGGGAAGGACCTGCCGGGCCTGCCACGACGCCCACGCCGTC
AACGGCCGGAAGCTGATCGGCGCCGATGGGGCCGTGTTCGGCAAATGGAAGATCCCGACCCGATTCAAGACCACGGCCAC
GGGCGGGAGCTGCGCCCCCGGCTGTCACCGGCAGTTGTCCTACGACCGTGAAAAGCCGGTTTCCTACACGCCCCAGAAAG
AAGCCCCTAAAGACGCGACGAAAGAGGTCCCCCAGACACCACCCCCGACCAGCGACGCCGCTCCTTCCGGCCAAACGAAA
TAG

Upstream 100 bases:

>100_bases
CTGGCAAGACGACGCCGGTGACGACAAGGAGGGGGAACTGGGCGTGCCCAGACGGACTGAACGGCCGACCACCACGTGGC
GCACGCTCTGAGAGGGGACC

Downstream 100 bases:

>100_bases
GTTTCTCTCCCGCCGTCGGACTGACTCCGCGCCAGCCCGGCCCCCCAGACAAGGGGCTGGGCTGGGCGATTTGCCTCAGC
CTCCCCGCACCGCTCTGCGT

Product: cytochrome C

Products: NA

Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Multiheme C-Type Cytochrome; Nitrate/TMAO Reductase; Doubled CXXCH Domain-Containing Protein; Cytochrome C; Multiheme Cytochrome; Decaheme Cytochrome C; Decaheme Cytochrome C MtrD; Double CXXCH Motif-Containing Protein; Cytochrome C-Type Protein NrfB

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MFRLLFAITILLALSLPGTALALTCTIKGCHPFLQDLKNLHAPVKEGKCLSCHVQKEEMHPYPGLKAFELKAKGVDLCYL
CHDKLAMGPVVHGPVRDGDCTACHRYHGASGPKLLDMGEDQTAFCTGCHDEGEFRRHYQHGPAAVGDCTSCHTHHSSTEK
KLLKEQSRQLCLSCHNDFAQTMAKAPRVHPPVSNDACTSCHNPHSSASQFVLKEKMPDLCYGCHSAMATKVPNVKVPHKP
ISQAKSCGSCHSAHFSPAKGLLAVDQKNLCLGCHGQDGLHSSKVFREYSGLPLVNMKKALDKKSQLHGPINDGACAACHS
PHGSDNFRMLVKSYPAPFYVPYKEGLYDLCFSCHDKSMLKYPDTTLYTNFRNGKQNLHYLHVSDKRKGRTCRACHDAHAV
NGRKLIGADGAVFGKWKIPTRFKTTATGGSCAPGCHRQLSYDREKPVSYTPQKEAPKDATKEVPQTPPPTSDAAPSGQTK

Sequences:

>Translated_480_residues
MFRLLFAITILLALSLPGTALALTCTIKGCHPFLQDLKNLHAPVKEGKCLSCHVQKEEMHPYPGLKAFELKAKGVDLCYL
CHDKLAMGPVVHGPVRDGDCTACHRYHGASGPKLLDMGEDQTAFCTGCHDEGEFRRHYQHGPAAVGDCTSCHTHHSSTEK
KLLKEQSRQLCLSCHNDFAQTMAKAPRVHPPVSNDACTSCHNPHSSASQFVLKEKMPDLCYGCHSAMATKVPNVKVPHKP
ISQAKSCGSCHSAHFSPAKGLLAVDQKNLCLGCHGQDGLHSSKVFREYSGLPLVNMKKALDKKSQLHGPINDGACAACHS
PHGSDNFRMLVKSYPAPFYVPYKEGLYDLCFSCHDKSMLKYPDTTLYTNFRNGKQNLHYLHVSDKRKGRTCRACHDAHAV
NGRKLIGADGAVFGKWKIPTRFKTTATGGSCAPGCHRQLSYDREKPVSYTPQKEAPKDATKEVPQTPPPTSDAAPSGQTK
>Mature_480_residues
MFRLLFAITILLALSLPGTALALTCTIKGCHPFLQDLKNLHAPVKEGKCLSCHVQKEEMHPYPGLKAFELKAKGVDLCYL
CHDKLAMGPVVHGPVRDGDCTACHRYHGASGPKLLDMGEDQTAFCTGCHDEGEFRRHYQHGPAAVGDCTSCHTHHSSTEK
KLLKEQSRQLCLSCHNDFAQTMAKAPRVHPPVSNDACTSCHNPHSSASQFVLKEKMPDLCYGCHSAMATKVPNVKVPHKP
ISQAKSCGSCHSAHFSPAKGLLAVDQKNLCLGCHGQDGLHSSKVFREYSGLPLVNMKKALDKKSQLHGPINDGACAACHS
PHGSDNFRMLVKSYPAPFYVPYKEGLYDLCFSCHDKSMLKYPDTTLYTNFRNGKQNLHYLHVSDKRKGRTCRACHDAHAV
NGRKLIGADGAVFGKWKIPTRFKTTATGGSCAPGCHRQLSYDREKPVSYTPQKEAPKDATKEVPQTPPPTSDAAPSGQTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52520; Mature: 52520

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLLFAITILLALSLPGTALALTCTIKGCHPFLQDLKNLHAPVKEGKCLSCHVQKEEMH
CHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHCCCEEEEEEEHHHCC
PYPGLKAFELKAKGVDLCYLCHDKLAMGPVVHGPVRDGDCTACHRYHGASGPKLLDMGED
CCCCCEEEEEECCCCCEEEEECCHHHCCCEEECCCCCCCCHHHHHHCCCCCCEEEECCCC
QTAFCTGCHDEGEFRRHYQHGPAAVGDCTSCHTHHSSTEKKLLKEQSRQLCLSCHNDFAQ
CCEEEECCCCCHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TMAKAPRVHPPVSNDACTSCHNPHSSASQFVLKEKMPDLCYGCHSAMATKVPNVKVPHKP
HHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCH
ISQAKSCGSCHSAHFSPAKGLLAVDQKNLCLGCHGQDGLHSSKVFREYSGLPLVNMKKAL
HHHHHHCCCHHCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHH
DKKSQLHGPINDGACAACHSPHGSDNFRMLVKSYPAPFYVPYKEGLYDLCFSCHDKSMLK
HHHHHCCCCCCCCCEEECCCCCCCCHHEEHHHHCCCCEEECHHHHHHHHHHHHCCCCHHC
YPDTTLYTNFRNGKQNLHYLHVSDKRKGRTCRACHDAHAVNGRKLIGADGAVFGKWKIPT
CCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCEEEEEEECCC
RFKTTATGGSCAPGCHRQLSYDREKPVSYTPQKEAPKDATKEVPQTPPPTSDAAPSGQTK
CEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRLLFAITILLALSLPGTALALTCTIKGCHPFLQDLKNLHAPVKEGKCLSCHVQKEEMH
CHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHCCCEEEEEEEHHHCC
PYPGLKAFELKAKGVDLCYLCHDKLAMGPVVHGPVRDGDCTACHRYHGASGPKLLDMGED
CCCCCEEEEEECCCCCEEEEECCHHHCCCEEECCCCCCCCHHHHHHCCCCCCEEEECCCC
QTAFCTGCHDEGEFRRHYQHGPAAVGDCTSCHTHHSSTEKKLLKEQSRQLCLSCHNDFAQ
CCEEEECCCCCHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TMAKAPRVHPPVSNDACTSCHNPHSSASQFVLKEKMPDLCYGCHSAMATKVPNVKVPHKP
HHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCH
ISQAKSCGSCHSAHFSPAKGLLAVDQKNLCLGCHGQDGLHSSKVFREYSGLPLVNMKKAL
HHHHHHCCCHHCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHH
DKKSQLHGPINDGACAACHSPHGSDNFRMLVKSYPAPFYVPYKEGLYDLCFSCHDKSMLK
HHHHHCCCCCCCCCEEECCCCCCCCHHEEHHHHCCCCEEECHHHHHHHHHHHHCCCCHHC
YPDTTLYTNFRNGKQNLHYLHVSDKRKGRTCRACHDAHAVNGRKLIGADGAVFGKWKIPT
CCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCEEEEEEECCC
RFKTTATGGSCAPGCHRQLSYDREKPVSYTPQKEAPKDATKEVPQTPPPTSDAAPSGQTK
CEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA