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The map label for this gene is trg [C]

Identifier: 39998286

GI number: 39998286

Start: 3504112

End: 3505398

Strand: Direct

Name: trg [C]

Synonym: GSU3196

Alternate gene names: 39998286

Gene position: 3504112-3505398 (Clockwise)

Preceding gene: 39998285

Following gene: 39998287

Centisome position: 91.87

GC content: 63.95

Gene sequence:

>1287_bases
ATGCGCATCCCTCTTGGCTACAAGTTCATCCTCGGATTCGTGGTGGTCGTGGCTGCGGTTGCCTTTGTTCCCACCGGCAT
CCGTCTCCTCGGCTACGCGCCCGAAATCACCCATATCCTGACTTACGTCGTGGCCATGACCATCGGCCTGATTCTCGGCT
GGATCTTCTCGCGGGGAGTCGCGCGCAACATGGGGCTTCTGACCGATTCGGCCGAGGCCATCAGCCGCGGCGACCTGACC
AGGGACGTGGCACTCCCGCCCGGGCGCTTCCCCGATGAGACAGTTGACCTGGGCGATTCCATCAACATCATGGTCGGCAG
CCTCCGGGAGCTTGTGGGACACATCCGGACCACGGCCGAAAAGGTTGCTGCTTCTGCCCGCACCTTGTCCGATTCGACGG
TCGAGGTGAACTCCTCCTCCGAGGAGGTGGCCCAGGCCGTGGAGCAGATCGCCCGGGGCGCGGGCACCCAGGCTGAGATG
GTGGAGCGAAGCTCCCGCATCATCCATGAAATGGCCATCTCCGTAGAACTGGTGTCGAAGCGGGCGCGGGAATCGGCAAA
GGCGGCCCAGGAAACGAGTCGCACCGCACGGCGGGGGCAAAAACTGGCCAATGACTCGCTGGAGCGGATGACCAGCTTCT
TTGGCAAGGTTGAGGAGAGCAGCGCCCAGTTTCTCTCGTTCAACGCCCGACTGCAGCAAGTAGGCAAGATCGCTGACTTC
ATCGCCGAGATCGCCCGCCAGACGAATCTCCTGGCCCTCAATGCCTCCATAGAGGCGGCCCGGGCCGGAGAGTACGGCAA
GGGGTTCGCCGTAGTGGCGGACGAGGTCCGGAAACTGGCGGACGGCACCGGCAAATCGGCGGCTCACATCACGGAACTCA
TTGCCGCGGTGCGCGAGGAAAGCCGTCGCGTCCAGCAACTCATCGAAGAAAGCTCCCGCGACATCGGCGAAGGGAAGCGC
AACGTGGATATCACGGCCGGCGCCTTCCAGGATATTCTCTCCAACGCCCTGGAAACGGAGCGGAGGGCGGGCAGCATCGC
CGACCTCTCCCACATCCAGACCGATGGAGCGCAGAAGATGGTCACTGCCGTCGACGAAATCGCCCGGGTTGCCGAAGACA
ACGCCGCCGCCACCGAGGAGGTATCGGCCGCCTCCGAGCAGCAGGCAATCGCCATGCACGAGATGACCGTGGCCGCTCGC
GACCTGGCCGACCTGGCCGGAGTCCTCATGGGAGTAGTGGAGCGCTTTATCCTTCCCCGTTCCGAGGGCGGCAACAAAGC
GCCGTGA

Upstream 100 bases:

>100_bases
TGGAACGGATTTACACGAAGAATCGCTTTTCGGTATACTAACAGCCGTGATTTCCCCCCGACGACGTGCGGCTGCGGCGC
CGTCGGCCAGTGGAGCGAGT

Downstream 100 bases:

>100_bases
GTGACCGAATGGACCGCTACGTCATCTTTACGGTGACTGACCGGAAACTGGCCCTCCCCCTGGACAAGACGGCGGAGGTG
TTGGAGGGCGCCGCCACCCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRIPLGYKFILGFVVVVAAVAFVPTGIRLLGYAPEITHILTYVVAMTIGLILGWIFSRGVARNMGLLTDSAEAISRGDLT
RDVALPPGRFPDETVDLGDSINIMVGSLRELVGHIRTTAEKVAASARTLSDSTVEVNSSSEEVAQAVEQIARGAGTQAEM
VERSSRIIHEMAISVELVSKRARESAKAAQETSRTARRGQKLANDSLERMTSFFGKVEESSAQFLSFNARLQQVGKIADF
IAEIARQTNLLALNASIEAARAGEYGKGFAVVADEVRKLADGTGKSAAHITELIAAVREESRRVQQLIEESSRDIGEGKR
NVDITAGAFQDILSNALETERRAGSIADLSHIQTDGAQKMVTAVDEIARVAEDNAAATEEVSAASEQQAIAMHEMTVAAR
DLADLAGVLMGVVERFILPRSEGGNKAP

Sequences:

>Translated_428_residues
MRIPLGYKFILGFVVVVAAVAFVPTGIRLLGYAPEITHILTYVVAMTIGLILGWIFSRGVARNMGLLTDSAEAISRGDLT
RDVALPPGRFPDETVDLGDSINIMVGSLRELVGHIRTTAEKVAASARTLSDSTVEVNSSSEEVAQAVEQIARGAGTQAEM
VERSSRIIHEMAISVELVSKRARESAKAAQETSRTARRGQKLANDSLERMTSFFGKVEESSAQFLSFNARLQQVGKIADF
IAEIARQTNLLALNASIEAARAGEYGKGFAVVADEVRKLADGTGKSAAHITELIAAVREESRRVQQLIEESSRDIGEGKR
NVDITAGAFQDILSNALETERRAGSIADLSHIQTDGAQKMVTAVDEIARVAEDNAAATEEVSAASEQQAIAMHEMTVAAR
DLADLAGVLMGVVERFILPRSEGGNKAP
>Mature_428_residues
MRIPLGYKFILGFVVVVAAVAFVPTGIRLLGYAPEITHILTYVVAMTIGLILGWIFSRGVARNMGLLTDSAEAISRGDLT
RDVALPPGRFPDETVDLGDSINIMVGSLRELVGHIRTTAEKVAASARTLSDSTVEVNSSSEEVAQAVEQIARGAGTQAEM
VERSSRIIHEMAISVELVSKRARESAKAAQETSRTARRGQKLANDSLERMTSFFGKVEESSAQFLSFNARLQQVGKIADF
IAEIARQTNLLALNASIEAARAGEYGKGFAVVADEVRKLADGTGKSAAHITELIAAVREESRRVQQLIEESSRDIGEGKR
NVDITAGAFQDILSNALETERRAGSIADLSHIQTDGAQKMVTAVDEIARVAEDNAAATEEVSAASEQQAIAMHEMTVAAR
DLADLAGVLMGVVERFILPRSEGGNKAP

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=356, Percent_Identity=30.3370786516854, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=28.2913165266106, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI2367378, Length=311, Percent_Identity=29.2604501607717, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789453, Length=389, Percent_Identity=26.4781491002571, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=29.9295774647887, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 45818; Mature: 45818

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPLGYKFILGFVVVVAAVAFVPTGIRLLGYAPEITHILTYVVAMTIGLILGWIFSRGV
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARNMGLLTDSAEAISRGDLTRDVALPPGRFPDETVDLGDSINIMVGSLRELVGHIRTTAE
HHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KVAASARTLSDSTVEVNSSSEEVAQAVEQIARGAGTQAEMVERSSRIIHEMAISVELVSK
HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RARESAKAAQETSRTARRGQKLANDSLERMTSFFGKVEESSAQFLSFNARLQQVGKIADF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEIARQTNLLALNASIEAARAGEYGKGFAVVADEVRKLADGTGKSAAHITELIAAVREE
HHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SRRVQQLIEESSRDIGEGKRNVDITAGAFQDILSNALETERRAGSIADLSHIQTDGAQKM
HHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
VTAVDEIARVAEDNAAATEEVSAASEQQAIAMHEMTVAARDLADLAGVLMGVVERFILPR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEGGNKAP
CCCCCCCC
>Mature Secondary Structure
MRIPLGYKFILGFVVVVAAVAFVPTGIRLLGYAPEITHILTYVVAMTIGLILGWIFSRGV
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARNMGLLTDSAEAISRGDLTRDVALPPGRFPDETVDLGDSINIMVGSLRELVGHIRTTAE
HHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KVAASARTLSDSTVEVNSSSEEVAQAVEQIARGAGTQAEMVERSSRIIHEMAISVELVSK
HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RARESAKAAQETSRTARRGQKLANDSLERMTSFFGKVEESSAQFLSFNARLQQVGKIADF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEIARQTNLLALNASIEAARAGEYGKGFAVVADEVRKLADGTGKSAAHITELIAAVREE
HHHHHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SRRVQQLIEESSRDIGEGKRNVDITAGAFQDILSNALETERRAGSIADLSHIQTDGAQKM
HHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
VTAVDEIARVAEDNAAATEEVSAASEQQAIAMHEMTVAARDLADLAGVLMGVVERFILPR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEGGNKAP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA