| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998263
Identifier: 39998263
GI number: 39998263
Start: 3481696
End: 3483180
Strand: Direct
Name: 39998263
Synonym: GSU3173
Alternate gene names: NA
Gene position: 3481696-3483180 (Clockwise)
Preceding gene: 39998262
Following gene: 39998264
Centisome position: 91.28
GC content: 60.47
Gene sequence:
>1485_bases ATGAGCTCAGAGATGAACGGCACTGCCCCCTTTCAGGACCAGGGTGCGACTGACGTGTCGCTTTTGGAGGATATCGTCCG GGTCACTAAACTTCAACCGGCCGACGAAGCTTACTCTATCACCAGAAGAGGGGTCGCGGCCCTCATGGCCCAGCTTCTGG AGCCGGGAGCCGAAGCCCGGAAGGTATCCAAAGCAGTGCTTGATGACATGATCGCCGAAATCGACCGCAAGCTCTCCCTC CAGATGGACGAAATCCTCCACCACCCCCAGTTCCAGGCACTTGAATCATCCTGGCGTTCGCTCCACTTCCTGGTAGATCG AACCGACTTCAGGGAAAACAACCGGATCGAATTCCTGAACGCCACCAAGGAGGAACTGCTGGACGACTTCGAGGACGCGC CCGAGGTGGCCAAATCGGGCCTCTACAAGACCGTTTACTCCGCCGAGTACGGTCAGTTCGGCGGTAAGCCGTTCGGAGCG ATCATCGGCAACTACGACTTCGGTCCGGGGGCCCAGGACATAAAGCTCCTCCAGAGCCTGGCTGCCGTAGCCGGGATGGC CCACGCCCCCTTCATGGCCGCCGCATCTCCCCAGTTCTTCGGCTGTGATGACTTCACCGCCCTGCCGAATCTCAAAGACA TCTCATCGATCCTCGAAGGCCCCCAGTACGCCAAGTGGCAAGCGTTCCGCGAGAGCGAAGATGCCCGCTACGTGGGACTG GCCCTGCCCCGGTTCCTCCTGCGACTCCCCTACGGCGAGGCCACCAGGCCGGCCAAGTGTTTCAACTACGAAGAACAGGT CTCCGACAGCCACGACCGCTACTGCTGGGGCAACGCAGCCTTCGCCTTCGCCACCCGGCTCACCGAGAGCTTTGCCAACT TCCGCTGGTGCGCCAACATCATCGGTCCCCAGGGTGGCGGAACGGTGCATGACCTGCCGCTCCACCAGTACCAGGCAATG GGAGCCATCCAGACCAAGATCCCCACCGAAGTGCTCATCAGCGAGCGCCGCGAATTCGAGCTGGCCGAAGGAGGGTTCAT TGCCCTTACCATGCGAAAAGGCAGTGACAATGCCGCCTTCTTCTCCGCGAACTCGGTCCAGAAACCGAAATTCTTCGGCA GCTCCAAGGAGGGAAAAGAGGCCGAGCTCAACTACAAGCTGGGGCTCCAGCTCCCCTATATGTTCATCGTCAGTCGCCTC GCCCACTATCTGAAGGTGATCCAGCGGGAGCACATCGGCACGTGGAAGGAACGGGGCGATCTGGAGAATGAGCTCAATCT GTGGATTCGTCAGTACGTCTCCGAGATGGACAACCCCATGCCCGGCGTTCGCAGCCGCCGTCCCCTGCGCCAGGCCGAAG TGACCGTTGAGGAAGTCCCGGGCGAACCGGGCTGGTACCGGGTGGGCCTCAAGGTCACCCCTCACTTCAAGTACATGGGG GCATACTTCACGCTGTCACTGGTGGGGAAACTGGATAAAGAGTAG
Upstream 100 bases:
>100_bases ATTCCGGACTTCCGGAGAAAAATTCAGGAACTGGTCACTGACGATGCCGCCCGCGCCAAGCTGCTGGCTGAAATAGGGAT CGAAGGGTAAGGAGGAAACA
Downstream 100 bases:
>100_bases GGACGCGACAGAATCCGAGACTGTGCCTGCAATGCGGACCATCAGGGGCCGCAATTTAACATCACAAGGAGGTAGCAGCA GATGGCAATGCCCGCCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSSEMNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEARKVSKAVLDDMIAEIDRKLSL QMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLNATKEELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGA IIGNYDFGPGAQDIKLLQSLAAVAGMAHAPFMAAASPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGL ALPRFLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANIIGPQGGGTVHDLPLHQYQAM GAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAFFSANSVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRL AHYLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAEVTVEEVPGEPGWYRVGLKVTPHFKYMG AYFTLSLVGKLDKE
Sequences:
>Translated_494_residues MSSEMNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEARKVSKAVLDDMIAEIDRKLSL QMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLNATKEELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGA IIGNYDFGPGAQDIKLLQSLAAVAGMAHAPFMAAASPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGL ALPRFLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANIIGPQGGGTVHDLPLHQYQAM GAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAFFSANSVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRL AHYLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAEVTVEEVPGEPGWYRVGLKVTPHFKYMG AYFTLSLVGKLDKE >Mature_493_residues SSEMNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEARKVSKAVLDDMIAEIDRKLSLQ MDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLNATKEELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGAI IGNYDFGPGAQDIKLLQSLAAVAGMAHAPFMAAASPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGLA LPRFLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANIIGPQGGGTVHDLPLHQYQAMG AIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAFFSANSVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRLA HYLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAEVTVEEVPGEPGWYRVGLKVTPHFKYMGA YFTLSLVGKLDKE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55506; Mature: 55374
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEMNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH KVSKAVLDDMIAEIDRKLSLQMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLN HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHEEHEEECCCCCCCCCEEEEC ATKEELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGAIIGNYDFGPGAQDIKLLQSL CHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHH AAVAGMAHAPFMAAASPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGL HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCEEHHH ALPRFLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANI HHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH IGPQGGGTVHDLPLHQYQAMGAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAF CCCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCEECCCCEEEEEEECCCCCCEE FSANSVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGD EECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCC LENELNLWIRQYVSEMDNPMPGVRSRRPLRQAEVTVEEVPGEPGWYRVGLKVTPHFKYMG CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHH AYFTLSLVGKLDKE HHHHHHHHHHCCCC >Mature Secondary Structure SSEMNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH KVSKAVLDDMIAEIDRKLSLQMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLN HHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHEEHEEECCCCCCCCCEEEEC ATKEELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGAIIGNYDFGPGAQDIKLLQSL CHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHH AAVAGMAHAPFMAAASPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGL HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCEEHHH ALPRFLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANI HHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH IGPQGGGTVHDLPLHQYQAMGAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAF CCCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCEECCCCEEEEEEECCCCCCEE FSANSVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRLAHYLKVIQREHIGTWKERGD EECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCC LENELNLWIRQYVSEMDNPMPGVRSRRPLRQAEVTVEEVPGEPGWYRVGLKVTPHFKYMG CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHH AYFTLSLVGKLDKE HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA