| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is msrA
Identifier: 39998251
GI number: 39998251
Start: 3467663
End: 3468151
Strand: Direct
Name: msrA
Synonym: GSU3161
Alternate gene names: 39998251
Gene position: 3467663-3468151 (Clockwise)
Preceding gene: 39998250
Following gene: 39998252
Centisome position: 90.92
GC content: 64.83
Gene sequence:
>489_bases ATGGGAGAGAATACGAGTCTTGAGAAGGCTACCTTCGGGGCCGGCTGTTTCTGGCATGTGGAAGAGGAGTTCCGCCGCGT GCCCGGAGTCGTCTCAACCCTGGCGGGATATATGGGGGGATGGAAGGAACACCCCACCTACGAGGAGGTCTGCTCCAAGA CCACCGGCCACGCCGAGGTGGTGGAGGTGACCTTTGACCCCGCCGCCGTCACCTATGACCACCTGCTGCGGGTCTTCTGG GACTGCCACGACCCGACCCAGCTCAACCGGCAGGGCCCCGACATCGGCACCAACTACCGCTCCGTCATCTTTTACCACTC GCCGGACCAAGAGCGGGCGGCCCGGGCCTCCCTAGAGCACGAGCAGCGTTCCGGGCGCCATGCCCGCCCCATCGTTACCG AGATCGTTCCGGCTGCCACCTTCTGGTGGGCCGAGGAATACCACCAGCACTACCTGGAAAAACGGGGCGGCGGCAGTTGC CGCTGGTAG
Upstream 100 bases:
>100_bases GCCTGCGCCGCCTTGATTTTTGCCGTGGCGGCGCGTATGGTACGCGCAGGGACAACCATTGCGCGCTGTGTTACTCTTTT CAGGCAGGGAGGTACATGTC
Downstream 100 bases:
>100_bases GCCGGCGGATATTCTCCGCGAGCCCGGCGCGTGAACTCCCGCCCACGGGCAAATGACCCGACGCACGCACACTATCCCCA TCCCACGAGGATCCCATGAA
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGENTSLEKATFGAGCFWHVEEEFRRVPGVVSTLAGYMGGWKEHPTYEEVCSKTTGHAEVVEVTFDPAAVTYDHLLRVFW DCHDPTQLNRQGPDIGTNYRSVIFYHSPDQERAARASLEHEQRSGRHARPIVTEIVPAATFWWAEEYHQHYLEKRGGGSC RW
Sequences:
>Translated_162_residues MGENTSLEKATFGAGCFWHVEEEFRRVPGVVSTLAGYMGGWKEHPTYEEVCSKTTGHAEVVEVTFDPAAVTYDHLLRVFW DCHDPTQLNRQGPDIGTNYRSVIFYHSPDQERAARASLEHEQRSGRHARPIVTEIVPAATFWWAEEYHQHYLEKRGGGSC RW >Mature_161_residues GENTSLEKATFGAGCFWHVEEEFRRVPGVVSTLAGYMGGWKEHPTYEEVCSKTTGHAEVVEVTFDPAAVTYDHLLRVFWD CHDPTQLNRQGPDIGTNYRSVIFYHSPDQERAARASLEHEQRSGRHARPIVTEIVPAATFWWAEEYHQHYLEKRGGGSCR W
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family
Homologues:
Organism=Homo sapiens, GI6912516, Length=155, Percent_Identity=49.0322580645161, Blast_Score=149, Evalue=9e-37, Organism=Homo sapiens, GI208609995, Length=155, Percent_Identity=49.0322580645161, Blast_Score=149, Evalue=1e-36, Organism=Homo sapiens, GI208609993, Length=108, Percent_Identity=49.0740740740741, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=52.6315789473684, Blast_Score=158, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17533973, Length=145, Percent_Identity=36.551724137931, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320881, Length=157, Percent_Identity=38.8535031847134, Blast_Score=99, Evalue=3e-22, Organism=Drosophila melanogaster, GI24664627, Length=152, Percent_Identity=38.8157894736842, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI24664631, Length=152, Percent_Identity=37.5, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI45553131, Length=141, Percent_Identity=38.2978723404255, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSRA_GEOSL (Q747V4)
Other databases:
- EMBL: AE017180 - RefSeq: NP_954202.1 - HSSP: P0A744 - ProteinModelPortal: Q747V4 - SMR: Q747V4 - GeneID: 2686767 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU3161 - NMPDR: fig|243231.1.peg.3140 - TIGR: GSU3161 - HOGENOM: HBG748152 - OMA: NYRSVIF - ProtClustDB: PRK14054 - BioCyc: GSUL243231:GSU_3161-MONOMER - HAMAP: MF_01401 - InterPro: IPR002569 - Gene3D: G3DSA:3.30.1060.10 - TIGRFAMs: TIGR00401
Pfam domain/function: PF01625 PMSR; SSF55068 MsrA
EC number: =1.8.4.11
Molecular weight: Translated: 18553; Mature: 18421
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: ACT_SITE 16-16
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENTSLEKATFGAGCFWHVEEEFRRVPGVVSTLAGYMGGWKEHPTYEEVCSKTTGHAEV CCCCCCCCHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEE VEVTFDPAAVTYDHLLRVFWDCHDPTQLNRQGPDIGTNYRSVIFYHSPDQERAARASLEH EEEEECCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH EQRSGRHARPIVTEIVPAATFWWAEEYHQHYLEKRGGGSCRW HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GENTSLEKATFGAGCFWHVEEEFRRVPGVVSTLAGYMGGWKEHPTYEEVCSKTTGHAEV CCCCCCCHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEE VEVTFDPAAVTYDHLLRVFWDCHDPTQLNRQGPDIGTNYRSVIFYHSPDQERAARASLEH EEEEECCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH EQRSGRHARPIVTEIVPAATFWWAEEYHQHYLEKRGGGSCRW HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA