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The map label for this gene is 39998151

Identifier: 39998151

GI number: 39998151

Start: 3363768

End: 3364379

Strand: Direct

Name: 39998151

Synonym: GSU3060

Alternate gene names: NA

Gene position: 3363768-3364379 (Clockwise)

Preceding gene: 39998140

Following gene: 39998152

Centisome position: 88.19

GC content: 56.86

Gene sequence:

>612_bases
ATGACTTTACGAGAACGCAGACAAAAGCACAAGGCACTTTTTCGCCAGGAGATTCTTGACGCCGCCCGGGAACTGTTCTC
CCAGATCGGGTACGAGCGGTTCTCCATGCGCAAGCTTGCGGCCAAAATTGAGCATTCCCCCACAACCATCTACCTCTATT
TCCGCGACAAGGACGATCTCCTCTACTCTCTCTGCGAAGAGTTGTTTGCCACGTTATTCCAGAACTACCTGGACATCTCG
AAGGGGCACAGCGAGCCGCTGCAGGTTTTGCGTCTCTGCCTCCTGAGCTATATCGAGTTCGGGTTAGCGAATCCAGGCCA
CTACAAGGTCGCGTTCTTCACCAGTCCTGTGGTCTATGGTTCGCCGACGGAATTTCTACAAAAGGACAGCATGGGACGGC
GCATGTACTTTCATATTCTCCGGACCGTCGAAGAGGCTATGGCGGCTGGCATGCTTCGCCCCATGGACGCGGACCTCCTC
GCACAGACGTTGTGGACCGCTGCCCATGGCGTCGTGGCATCGCGAATTTACACTGCCGACTTCCCCTTGGTGGACGCTGC
CCTCCAGGCAGAAACGCTGGTGGACGGGCTGCTCGCCGGCTTCGGCACGTAA

Upstream 100 bases:

>100_bases
GATAGTCCCGCACCAGGCGATCCTCCCATCCATTCAAAGCTTGACAGCACACTCTTGATCCTCTACTTTGCGGAAAGCTC
GATTAACAGTGTTAAGCGTT

Downstream 100 bases:

>100_bases
AATTTTTATCGCATTATTTACACTGTTAATCAAAGATATCGCAGTTAATTTTCTTGCCGCCTAAGGGAAAGGAGCTACGA
ATGGCAAAGGGTATACTCAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTLRERRQKHKALFRQEILDAARELFSQIGYERFSMRKLAAKIEHSPTTIYLYFRDKDDLLYSLCEELFATLFQNYLDIS
KGHSEPLQVLRLCLLSYIEFGLANPGHYKVAFFTSPVVYGSPTEFLQKDSMGRRMYFHILRTVEEAMAAGMLRPMDADLL
AQTLWTAAHGVVASRIYTADFPLVDAALQAETLVDGLLAGFGT

Sequences:

>Translated_203_residues
MTLRERRQKHKALFRQEILDAARELFSQIGYERFSMRKLAAKIEHSPTTIYLYFRDKDDLLYSLCEELFATLFQNYLDIS
KGHSEPLQVLRLCLLSYIEFGLANPGHYKVAFFTSPVVYGSPTEFLQKDSMGRRMYFHILRTVEEAMAAGMLRPMDADLL
AQTLWTAAHGVVASRIYTADFPLVDAALQAETLVDGLLAGFGT
>Mature_202_residues
TLRERRQKHKALFRQEILDAARELFSQIGYERFSMRKLAAKIEHSPTTIYLYFRDKDDLLYSLCEELFATLFQNYLDISK
GHSEPLQVLRLCLLSYIEFGLANPGHYKVAFFTSPVVYGSPTEFLQKDSMGRRMYFHILRTVEEAMAAGMLRPMDADLLA
QTLWTAAHGVVASRIYTADFPLVDAALQAETLVDGLLAGFGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23157; Mature: 23026

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRERRQKHKALFRQEILDAARELFSQIGYERFSMRKLAAKIEHSPTTIYLYFRDKDDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCHHH
LYSLCEELFATLFQNYLDISKGHSEPLQVLRLCLLSYIEFGLANPGHYKVAFFTSPVVYG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
SPTEFLQKDSMGRRMYFHILRTVEEAMAAGMLRPMDADLLAQTLWTAAHGVVASRIYTAD
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
FPLVDAALQAETLVDGLLAGFGT
CCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLRERRQKHKALFRQEILDAARELFSQIGYERFSMRKLAAKIEHSPTTIYLYFRDKDDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCHHH
LYSLCEELFATLFQNYLDISKGHSEPLQVLRLCLLSYIEFGLANPGHYKVAFFTSPVVYG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
SPTEFLQKDSMGRRMYFHILRTVEEAMAAGMLRPMDADLLAQTLWTAAHGVVASRIYTAD
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
FPLVDAALQAETLVDGLLAGFGT
CCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA