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The map label for this gene is fliS [H]

Identifier: 39998127

GI number: 39998127

Start: 3342430

End: 3342864

Strand: Reverse

Name: fliS [H]

Synonym: GSU3036

Alternate gene names: 39998127

Gene position: 3342864-3342430 (Counterclockwise)

Preceding gene: 39998128

Following gene: 39998126

Centisome position: 87.64

GC content: 55.63

Gene sequence:

>435_bases
ATGCTGACCCCTTTCAACCAGTATCAGAACACCCAGGTCGGGACTGCCAGCCCGGAAAAGATCCTGATCATGCTCTATGA
CGGCGCTATCAACTTTTCGAAGATCGCCCTCGAGCGAATGGAGAAAAAAGATCTCGCCGGTAAGGGAAAGTACATCAGCA
AGGCCCAGGCAATCGTTTCCGAATTGATGAATACCCTCAATCATGACGTGGGCGGCGGCATCGCGCAGCGCCTCGAGCAG
CTTTATATCTATGTCATTGATGAGTATATCAACGCCAACATCAACAATTCGCCCCGGGCTCTGGAGAACGCGATCAGGAT
CCTGACCGTGCTCCGCGATTCCTGGGTCGAGGCGATCGATATCTGGAAGCGGGAGCGCGACGCCGTACCCCCTTCCGTGC
ATCAGCCGGGTTACGTGGCGGGACAGGCACGATGA

Upstream 100 bases:

>100_bases
GGAGACCCTTGTCAGCAGTCTTACAACGCAGGGGAATTCGCTTATAAGTTACCTGTACGGGTCGTAGCGATCGCACGAGT
CAACACCAGGAGGAACAGGA

Downstream 100 bases:

>100_bases
CAGCCGCGGACCTGACGGCATTACTGGCCAGTGGTGAAGAGCTCTACAACCTTCTCTTGTCCGAGGCGGAGGCGCTGCTG
CGCAACTTCGACACCAACAG

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLTPFNQYQNTQVGTASPEKILIMLYDGAINFSKIALERMEKKDLAGKGKYISKAQAIVSELMNTLNHDVGGGIAQRLEQ
LYIYVIDEYINANINNSPRALENAIRILTVLRDSWVEAIDIWKRERDAVPPSVHQPGYVAGQAR

Sequences:

>Translated_144_residues
MLTPFNQYQNTQVGTASPEKILIMLYDGAINFSKIALERMEKKDLAGKGKYISKAQAIVSELMNTLNHDVGGGIAQRLEQ
LYIYVIDEYINANINNSPRALENAIRILTVLRDSWVEAIDIWKRERDAVPPSVHQPGYVAGQAR
>Mature_144_residues
MLTPFNQYQNTQVGTASPEKILIMLYDGAINFSKIALERMEKKDLAGKGKYISKAQAIVSELMNTLNHDVGGGIAQRLEQ
LYIYVIDEYINANINNSPRALENAIRILTVLRDSWVEAIDIWKRERDAVPPSVHQPGYVAGQAR

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 16189; Mature: 16189

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTPFNQYQNTQVGTASPEKILIMLYDGAINFSKIALERMEKKDLAGKGKYISKAQAIVS
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ELMNTLNHDVGGGIAQRLEQLYIYVIDEYINANINNSPRALENAIRILTVLRDSWVEAID
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IWKRERDAVPPSVHQPGYVAGQAR
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTPFNQYQNTQVGTASPEKILIMLYDGAINFSKIALERMEKKDLAGKGKYISKAQAIVS
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ELMNTLNHDVGGGIAQRLEQLYIYVIDEYINANINNSPRALENAIRILTVLRDSWVEAID
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IWKRERDAVPPSVHQPGYVAGQAR
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]