| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998022
Identifier: 39998022
GI number: 39998022
Start: 3228374
End: 3228838
Strand: Direct
Name: 39998022
Synonym: GSU2931
Alternate gene names: NA
Gene position: 3228374-3228838 (Clockwise)
Preceding gene: 39998020
Following gene: 39998032
Centisome position: 84.64
GC content: 68.6
Gene sequence:
>465_bases ATGGTGGGGGCGGTGGCAGGAGCGGCATCCCTCGCCCGGCGGCGGTCCGACGCAGGCGGACAGAAGAGCGGCGATCAGGA TCAGAAGGGCCAGACGAGCGACCAATTCTCCCCCCGGAAGACCATGGCGAGCACAGTCAGGGCTACAATGACGGCAAAGG CTCCCAGCGTGAGCCACGAGGAGGCGCGGTTACCCTCACCGAACCAGACGGCCCGCTCGGGCCGGTGCCTGCCAAGCCAC GGCATGAGCAGGAACCAGAGAGAGAGGGCCACAATGCCCCAGGCGAAGCCGTTGCCGTGGCTCACGACCTCCTGGGTCCA GAGGAGAAACCAGGCCGATTTGGCCGGGTTTGGCGGGGCGGCCGGGTTGGCGGGGGCCAGGAGCGGCGCGGGGACAACCA GGGCGAGGAGCGCCAGCAGGAGCAGTCCGGCGGCAAAGGCCCGTTTGACCGGACGGAAAAAGTAG
Upstream 100 bases:
>100_bases AATGAGACAGTTCCGCCGGCACGAGCCGATAGTGGGCGATGGCCAGACGCGTGCTTCTGCCGTTACCCCGGTGACAGGAG ACGCAGGTGCCCTTTTCCGC
Downstream 100 bases:
>100_bases GGAGAACTCCGGACGTATTCCCCGCCACCCCGGGGCCCGCGGCGCAGGTCCCGCTCCGGTTCACCGCAATGCATAGGTTC TCTCACGGCATCCGCTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVGAVAGAASLARRRSDAGGQKSGDQDQKGQTSDQFSPRKTMASTVRATMTAKAPSVSHEEARLPSPNQTARSGRCLPSH GMSRNQRERATMPQAKPLPWLTTSWVQRRNQADLAGFGGAAGLAGARSGAGTTRARSASRSSPAAKARLTGRKK
Sequences:
>Translated_154_residues MVGAVAGAASLARRRSDAGGQKSGDQDQKGQTSDQFSPRKTMASTVRATMTAKAPSVSHEEARLPSPNQTARSGRCLPSH GMSRNQRERATMPQAKPLPWLTTSWVQRRNQADLAGFGGAAGLAGARSGAGTTRARSASRSSPAAKARLTGRKK >Mature_154_residues MVGAVAGAASLARRRSDAGGQKSGDQDQKGQTSDQFSPRKTMASTVRATMTAKAPSVSHEEARLPSPNQTARSGRCLPSH GMSRNQRERATMPQAKPLPWLTTSWVQRRNQADLAGFGGAAGLAGARSGAGTTRARSASRSSPAAKARLTGRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16114; Mature: 16114
Theoretical pI: Translated: 12.47; Mature: 12.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGAVAGAASLARRRSDAGGQKSGDQDQKGQTSDQFSPRKTMASTVRATMTAKAPSVSHE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH EARLPSPNQTARSGRCLPSHGMSRNQRERATMPQAKPLPWLTTSWVQRRNQADLAGFGGA HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH AGLAGARSGAGTTRARSASRSSPAAKARLTGRKK HCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCC >Mature Secondary Structure MVGAVAGAASLARRRSDAGGQKSGDQDQKGQTSDQFSPRKTMASTVRATMTAKAPSVSHE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH EARLPSPNQTARSGRCLPSHGMSRNQRERATMPQAKPLPWLTTSWVQRRNQADLAGFGGA HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH AGLAGARSGAGTTRARSASRSSPAAKARLTGRKK HCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA