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The map label for this gene is yedY [H]

Identifier: 39997817

GI number: 39997817

Start: 3000077

End: 3001054

Strand: Reverse

Name: yedY [H]

Synonym: GSU2723

Alternate gene names: 39997817

Gene position: 3001054-3000077 (Counterclockwise)

Preceding gene: 39997818

Following gene: 39997816

Centisome position: 78.68

GC content: 62.68

Gene sequence:

>978_bases
ATGAAGAACAGCCGCTTCACCCTTCCTTCCCATGAAATTTCACCCGAGGAGGCCTTCTTCAATCGGCGCACGTTCCTCAA
GGCCCTCGGTTTCGCCGGGCTCAACGCCTGGCCCCTCCTGAACGCCTGTACCAACTACGCCATGGAGCGGCGGGAACTGG
GCGGCACCCTCGTCAACCTCAAGACCCTGCCGGCGCGGCCCAACGCGCGCTACCCCCTGGACAGGCCCCTCACCGACCGG
CAGGAAGCGGCCATGTACTGCAATTTCTACGAATTCACCTCGGGTAAGGACGTCTGGCGTTACGTGGATCAATTCATCAC
CCGCCCCTGGCAGATTTCGGTGACCGGCTTGGTGAAGAACCCCAAGGTCTTCGACGTGGATGAACTGGTCCGGACTATGC
CCCTGGAGGAACGGACCTACCGTCACCGTTGCGTCGAGGCCTGGGCCATGGCGGTTCCCTGGGTCGGCTTTCCCCTGGCC
GAGCTCGTGAAGCGGGCCGACCCGCTGCCGGGTGCCACCCATCTGCGGTTCCTCTCATTTTTGCGCAAGGATCAGGCCCC
CAACCAGAGCGGCCTGTTCTCAACCGACCTCTGGCCCTACCATGAGGGGCTTACCCTGGCCGAGGCCACTAACGAACTGG
CCTTCCTCGCGGTGGGGGTCTACGGCCGGGAGTTGCCGAAGCAGCACGGGGCGCCGATTCGTCTGGTCCTGCCTTGGAAG
TACGGTTTCAAGAGTATCAAGTCCATCGTGGAGATCAGTTTCACCGACCGGCAGCCTTCCACCTTCTGGAGCAGTCTGGG
TCCGGACGAATACGGCTTTTGGGCCAACGTGAACCCGGACGTCGATCATCCCCGCTGGTCCCAGAAGAGCGAGCGAATGC
TCGGCACGGGAGAGCGACGGCCCACGGTCATCTTCAATGGCTACGGCGAGCACGTGTCCCACCTCTACCGGCCACCGCGG
CGGGAGTTCTTTTATTGA

Upstream 100 bases:

>100_bases
CGAGAACCATACGAGAAGCATGACGTGGTAGCGGGGCCGGACTGACGGAAGGCCGGAAAGGCGGGGCAATCCCCCGCCTT
TCCGGAGAAGGAGCACGGTT

Downstream 100 bases:

>100_bases
GCCCGCGGCCGCCTTGAACGCATAAGGCTTCACACATATTCCACGGTCTGTTAAGATGCGTGTTCGTCATCGCCCATTAC
CCCGTTGCGGCAGAGGAGAA

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKNSRFTLPSHEISPEEAFFNRRTFLKALGFAGLNAWPLLNACTNYAMERRELGGTLVNLKTLPARPNARYPLDRPLTDR
QEAAMYCNFYEFTSGKDVWRYVDQFITRPWQISVTGLVKNPKVFDVDELVRTMPLEERTYRHRCVEAWAMAVPWVGFPLA
ELVKRADPLPGATHLRFLSFLRKDQAPNQSGLFSTDLWPYHEGLTLAEATNELAFLAVGVYGRELPKQHGAPIRLVLPWK
YGFKSIKSIVEISFTDRQPSTFWSSLGPDEYGFWANVNPDVDHPRWSQKSERMLGTGERRPTVIFNGYGEHVSHLYRPPR
REFFY

Sequences:

>Translated_325_residues
MKNSRFTLPSHEISPEEAFFNRRTFLKALGFAGLNAWPLLNACTNYAMERRELGGTLVNLKTLPARPNARYPLDRPLTDR
QEAAMYCNFYEFTSGKDVWRYVDQFITRPWQISVTGLVKNPKVFDVDELVRTMPLEERTYRHRCVEAWAMAVPWVGFPLA
ELVKRADPLPGATHLRFLSFLRKDQAPNQSGLFSTDLWPYHEGLTLAEATNELAFLAVGVYGRELPKQHGAPIRLVLPWK
YGFKSIKSIVEISFTDRQPSTFWSSLGPDEYGFWANVNPDVDHPRWSQKSERMLGTGERRPTVIFNGYGEHVSHLYRPPR
REFFY
>Mature_325_residues
MKNSRFTLPSHEISPEEAFFNRRTFLKALGFAGLNAWPLLNACTNYAMERRELGGTLVNLKTLPARPNARYPLDRPLTDR
QEAAMYCNFYEFTSGKDVWRYVDQFITRPWQISVTGLVKNPKVFDVDELVRTMPLEERTYRHRCVEAWAMAVPWVGFPLA
ELVKRADPLPGATHLRFLSFLRKDQAPNQSGLFSTDLWPYHEGLTLAEATNELAFLAVGVYGRELPKQHGAPIRLVLPWK
YGFKSIKSIVEISFTDRQPSTFWSSLGPDEYGFWANVNPDVDHPRWSQKSERMLGTGERRPTVIFNGYGEHVSHLYRPPR
REFFY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=328, Percent_Identity=43.9024390243902, Blast_Score=251, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37609; Mature: 37609

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSRFTLPSHEISPEEAFFNRRTFLKALGFAGLNAWPLLNACTNYAMERRELGGTLVNL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
KTLPARPNARYPLDRPLTDRQEAAMYCNFYEFTSGKDVWRYVDQFITRPWQISVTGLVKN
EECCCCCCCCCCCCCCCCCHHHHHHEECEEEECCCHHHHHHHHHHHCCCEEEEEEEEECC
PKVFDVDELVRTMPLEERTYRHRCVEAWAMAVPWVGFPLAELVKRADPLPGATHLRFLSF
CCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LRKDQAPNQSGLFSTDLWPYHEGLTLAEATNELAFLAVGVYGRELPKQHGAPIRLVLPWK
HHHCCCCCCCCCEECCCCCCCCCCCHHHHHCCEEEEEECHHHHHHHHHCCCCEEEEECCH
YGFKSIKSIVEISFTDRQPSTFWSSLGPDEYGFWANVNPDVDHPRWSQKSERMLGTGERR
HHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCC
PTVIFNGYGEHVSHLYRPPRREFFY
CEEEECCCHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MKNSRFTLPSHEISPEEAFFNRRTFLKALGFAGLNAWPLLNACTNYAMERRELGGTLVNL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
KTLPARPNARYPLDRPLTDRQEAAMYCNFYEFTSGKDVWRYVDQFITRPWQISVTGLVKN
EECCCCCCCCCCCCCCCCCHHHHHHEECEEEECCCHHHHHHHHHHHCCCEEEEEEEEECC
PKVFDVDELVRTMPLEERTYRHRCVEAWAMAVPWVGFPLAELVKRADPLPGATHLRFLSF
CCEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LRKDQAPNQSGLFSTDLWPYHEGLTLAEATNELAFLAVGVYGRELPKQHGAPIRLVLPWK
HHHCCCCCCCCCEECCCCCCCCCCCHHHHHCCEEEEEECHHHHHHHHHCCCCEEEEECCH
YGFKSIKSIVEISFTDRQPSTFWSSLGPDEYGFWANVNPDVDHPRWSQKSERMLGTGERR
HHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCC
PTVIFNGYGEHVSHLYRPPRREFFY
CEEEECCCHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]