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The map label for this gene is ycfQ [C]

Identifier: 39997760

GI number: 39997760

Start: 2940336

End: 2940977

Strand: Reverse

Name: ycfQ [C]

Synonym: GSU2666

Alternate gene names: 39997760

Gene position: 2940977-2940336 (Counterclockwise)

Preceding gene: 39997764

Following gene: 39997759

Centisome position: 77.11

GC content: 61.84

Gene sequence:

>642_bases
ATGGCAGAACGGGACAAGAGACGGACCGACCACGGAGATTCGGCGGTGCGGAGACGTTTGCTGGCGGCGGCGACGGAGCT
TTTTACCGTAAAGGGATACGCGGCCACGTCGGTACGGGAGATCGTTGAGGCGGCAGGCGTTTCCAAGCCGGTCCTCTATT
ACTGGTTTGGCAACAAGGAAGGCATCTATCTGGAGCTGATGACCGAGCCGTTCGGCCGTTTTACCGCACTGCTGGAAGAG
TACCTGGGCGCTGCCGGAAGCCCGTGCGGCCGGCTCGTGGATCTGCTCGACCATACGCTCATGCTCGTTCAGGAGAACCT
GGGCGGCACGAGGCTCATGTACTCCATTTACTACGGGCCGCCCCAGGGCGCTCCCTTTATCGACTTCGAGGGCTACCACC
GCCATTTCCAGGATGCCATTCGGAAGCTGGTTTCCGAAGGCATGGAGGGGGGTGCGCTGCGTTCGGAAAACGTGGACGAC
GTGATGTGGATTCTGCTCGGAGTCTTCAATGTTGCCCTGGAGGAGCAGTTGTGCGGGCGCCCGGACCGTCCGCCCGGCAT
TGACCGGGAGGGGGTGAGGCGTATGTTGACTCTTGTCCTGAGCGGATTTGCGGCCCGGACGGCCGACGAGGTGGAACGAT
GA

Upstream 100 bases:

>100_bases
CAGGAGGTTGCCTACCGGTAGGTAAATTGTTCTTGACAGATGTATCCGGTTAGAGTACCTACCGGTAGGTAGTATTTTGG
GGCCCGGGAGGAAATATTCA

Downstream 100 bases:

>100_bases
CAGTCAAATGGTTGGTGTGCGTACTTGGCGGGGTGCTTCTGGCAGGCGGGCTTGCGGGATGTTCGAAGGATGGCGAGGCA
CAGAACGCTCGGGTGGAAAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR Transcriptional Regulator

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MAERDKRRTDHGDSAVRRRLLAAATELFTVKGYAATSVREIVEAAGVSKPVLYYWFGNKEGIYLELMTEPFGRFTALLEE
YLGAAGSPCGRLVDLLDHTLMLVQENLGGTRLMYSIYYGPPQGAPFIDFEGYHRHFQDAIRKLVSEGMEGGALRSENVDD
VMWILLGVFNVALEEQLCGRPDRPPGIDREGVRRMLTLVLSGFAARTADEVER

Sequences:

>Translated_213_residues
MAERDKRRTDHGDSAVRRRLLAAATELFTVKGYAATSVREIVEAAGVSKPVLYYWFGNKEGIYLELMTEPFGRFTALLEE
YLGAAGSPCGRLVDLLDHTLMLVQENLGGTRLMYSIYYGPPQGAPFIDFEGYHRHFQDAIRKLVSEGMEGGALRSENVDD
VMWILLGVFNVALEEQLCGRPDRPPGIDREGVRRMLTLVLSGFAARTADEVER
>Mature_212_residues
AERDKRRTDHGDSAVRRRLLAAATELFTVKGYAATSVREIVEAAGVSKPVLYYWFGNKEGIYLELMTEPFGRFTALLEEY
LGAAGSPCGRLVDLLDHTLMLVQENLGGTRLMYSIYYGPPQGAPFIDFEGYHRHFQDAIRKLVSEGMEGGALRSENVDDV
MWILLGVFNVALEEQLCGRPDRPPGIDREGVRRMLTLVLSGFAARTADEVER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23820; Mature: 23688

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERDKRRTDHGDSAVRRRLLAAATELFTVKGYAATSVREIVEAAGVSKPVLYYWFGNKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
GIYLELMTEPFGRFTALLEEYLGAAGSPCGRLVDLLDHTLMLVQENLGGTRLMYSIYYGP
CEEEEEHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
PQGAPFIDFEGYHRHFQDAIRKLVSEGMEGGALRSENVDDVMWILLGVFNVALEEQLCGR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDRPPGIDREGVRRMLTLVLSGFAARTADEVER
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AERDKRRTDHGDSAVRRRLLAAATELFTVKGYAATSVREIVEAAGVSKPVLYYWFGNKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
GIYLELMTEPFGRFTALLEEYLGAAGSPCGRLVDLLDHTLMLVQENLGGTRLMYSIYYGP
CEEEEEHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
PQGAPFIDFEGYHRHFQDAIRKLVSEGMEGGALRSENVDDVMWILLGVFNVALEEQLCGR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDRPPGIDREGVRRMLTLVLSGFAARTADEVER
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA