| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cotA [H]
Identifier: 39997751
GI number: 39997751
Start: 2928502
End: 2931024
Strand: Reverse
Name: cotA [H]
Synonym: GSU2657
Alternate gene names: 39997751
Gene position: 2931024-2928502 (Counterclockwise)
Preceding gene: 39997756
Following gene: 39997742
Centisome position: 76.85
GC content: 61.51
Gene sequence:
>2523_bases ATGACAAACGTACGGGTACGCATTGTGGCAGTCGTGGCAGTCAGTATCGGTCTGGCGCTGTTTGCGCTGGGAGGTCCACG CAAGGCCTGCTCCCAGCCGGTCCCCGGCGGGACGCTGGATCCCCTGACAATTCCCAAGTTCGTCACCCCGCTCGTCATCC CCCCGGAAATGCCGAAAAGCACGGTTCAGCCCGGGGTTCCCGCCGCGGCATACAATATAGCCGTGCGCCAGTTCAAGCAG CAGATCCTGCCGGGCGGAGTGTGGAATACGGTGAACGGTCGTAGCGATACCTTCGGCGCCACCACCGTCTGGAGCTATGG CCGGGCCCAGGACAAGATCCCCGTCGGATTCATCGCCCCGGCTCCCCTGTCGAGCAATATTTCTTTCAACTATCCCGCGT TTACGGTGGAGAACACGTCGGGCATTATGACCCGGGTCCGCTGGATCAATGATCTGGTTGATGCCAAGGGCAACTACCTG CCGCATCTCCTGCCAGTGGATCAGACCCTCCACTGGGCCAACCCACCGGCAACCGGTTGCATCGACGGAACGAACCGGAC CGAATGCCGGACGTTCAATACGGCTCCCTACACGGGACCGGTTCCCCTTGTCACCCACGTTCACGGCGCCCACGTCAACG CGTCGAGCGACGGGTACCCCGAAGCCTGGTGGCTGCCTGCGGCCAAAAATATTCCGGCGGGCTATGCTGCCCGCGGCACC GTTTTCGACCAGTTCGACCCCCGTAACACCGTCAAGGGATCGGCCTATTTCGCCTACGAGAACGACCAACCCGCTGCGAC CCTCTGGTACCACGATCATACCCTCGGCATCACCCGCAACAATGTCTATGCCGGGCCCGCCGGTTTCTGGCTCGTCAGGG GCGGTGCCAACGGCGATGCCTTCGTGGACGATGGAACATCAGCCGCACTCAACGACGGCAGGTTGCCCGGTCCGGCCCCC CGGGCAGGCATGGGTGATCCCAACTTCAATGCAGCCATCAGGGCCACCATCCGTGAGATTCCCGTGGTGATTCAGGACCG CTCGTTCAATGCCGATGGCTCCCTTTTTTATCCCGATAACCGAGCATTCTTCGAGGGATTGAACGTTTCGGGCGCCACTC CGCCCCAGTTCCCCGGCGCAGGGGTCCTCAATATTCCCTTCATCCCCAACTCCGATATTTCCGCCATCTGGAATCCCGAG GTGTTTTTCAACACCATGGTGGTTAACGGCACCACCTGGCCGCAACTGGAAAGCGCTCCGGCCCGCTATCGCCTGCGCCT TCTGAACGGCTGCAACTCCCGGACTCTCAACCTGACGCTCTTTACCGTGACCGGCGCCGGACCGGACGGCATCATGGGAA CAGCGGACGATGTTCTCGGCGCCGAGATTCCCTTTTATCAGATCGGCGCCGAACAGGGCTTCCTGCCCCAGGTGGTCATG ATCAAGACCGGCCAGTACACGCCGTTGCCGGGCAACGGGGCCATACCCGCGGGGCTTGCCGCACCCGATCCCATGCAGGC ACTTCTCATGGGGCCGGCCGAGCGAGCCGACGTGATCATCGACTTCACGGGCCTTGCCGATGGTACCGTGGTACGAATGA TCAATACCGCCCCCGACGCACCCTTCGGCGGGTTCCCCGATGCTCCGGCTGATATCGATACTACCGGTCAAGTGATGCAG TTTGTGGTTAAGGCGTCCCTTATCCAGCCGGGTGACGCCCTGACAACGCCGCCGGAGAATCTGGTCCTTCCAGCAGAGGC TTCTCTGCCGGCTACCGTGGCTGTCCGTCAGTTGACCCTCAATGAGGAGGAGTCAACCCGGCTCTGTGTCCAAGCACAGC CGGACGGAAGCATTACAACGCTTTTCGTTGACCCGATGCCGCTCCCGGGCTTTCTCTCGGCCTGTGCAGCGGCTGGCGGA ATGCCCATGGGGCCGCGGGAGGCGAAGCTCGGCGTGCTTGTTGCTGACCCCATGACCGGAATGATGATGAGCATGCCCAT GATGTGGGCCGACATCATTACCGAGGCGCCTGTAACCGGTACCACCGAGATCTGGGAGATCTACAACCTGACCATGGATG CCCACCCGATTCACCCGCACCTGGTGAGATTCGAGGTGGTCGACCGCCAGCCCTTCGACATGATGACGTTCATGCCCAGT GGTCCCGCGGTGCCTCCCGAACCCTACGAGCAGGGCTACAAGGACACGGTTCTGGCGTACCCTGGCCAGATCACACGGGT CAAGGCAACGTTCGACAAGATCGGCCTCTATGTCTGGCACTGCCACATCCTCGAACACGAAGATAACGAGATGATGCGGC CGTACATGGTCAAGATCGATCCGGCTTTCCCCGACGTGAATGCCGACGGTAAATTGGCTGTCACCGATGCCCTTGATCTG CTGAAGAAGCTCAAGTCTCCCCTGCTCGCCGGCGCTCCCTATGATCTCACGGGCGACGGAACGCTCGACGTGCGCGACGT TCTGGCACTGCTCAGAACCATCGTGTTCGGACCGCCGCGATAA
Upstream 100 bases:
>100_bases ACATCCCTCCCGGAGCGGATGGAAGAGAGAGCAGGCCAGCGAGGCGTGCAGCCCCAGGGCAGCCGGCCGCATAAACGGAA AGGAAAGGAGGTCGTACGCC
Downstream 100 bases:
>100_bases CGGAAGCCGCACTATGAGGCATGTGAAAGGCGGGAGAGGAATCTCCCGCCTTTCCTTTTGCCGGGACTGTCCCGGTCTGC TCAGATGCTTTCAATAAACA
Product: spore coat protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 840; Mature: 839
Protein sequence:
>840_residues MTNVRVRIVAVVAVSIGLALFALGGPRKACSQPVPGGTLDPLTIPKFVTPLVIPPEMPKSTVQPGVPAAAYNIAVRQFKQ QILPGGVWNTVNGRSDTFGATTVWSYGRAQDKIPVGFIAPAPLSSNISFNYPAFTVENTSGIMTRVRWINDLVDAKGNYL PHLLPVDQTLHWANPPATGCIDGTNRTECRTFNTAPYTGPVPLVTHVHGAHVNASSDGYPEAWWLPAAKNIPAGYAARGT VFDQFDPRNTVKGSAYFAYENDQPAATLWYHDHTLGITRNNVYAGPAGFWLVRGGANGDAFVDDGTSAALNDGRLPGPAP RAGMGDPNFNAAIRATIREIPVVIQDRSFNADGSLFYPDNRAFFEGLNVSGATPPQFPGAGVLNIPFIPNSDISAIWNPE VFFNTMVVNGTTWPQLESAPARYRLRLLNGCNSRTLNLTLFTVTGAGPDGIMGTADDVLGAEIPFYQIGAEQGFLPQVVM IKTGQYTPLPGNGAIPAGLAAPDPMQALLMGPAERADVIIDFTGLADGTVVRMINTAPDAPFGGFPDAPADIDTTGQVMQ FVVKASLIQPGDALTTPPENLVLPAEASLPATVAVRQLTLNEEESTRLCVQAQPDGSITTLFVDPMPLPGFLSACAAAGG MPMGPREAKLGVLVADPMTGMMMSMPMMWADIITEAPVTGTTEIWEIYNLTMDAHPIHPHLVRFEVVDRQPFDMMTFMPS GPAVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGLYVWHCHILEHEDNEMMRPYMVKIDPAFPDVNADGKLAVTDALDL LKKLKSPLLAGAPYDLTGDGTLDVRDVLALLRTIVFGPPR
Sequences:
>Translated_840_residues MTNVRVRIVAVVAVSIGLALFALGGPRKACSQPVPGGTLDPLTIPKFVTPLVIPPEMPKSTVQPGVPAAAYNIAVRQFKQ QILPGGVWNTVNGRSDTFGATTVWSYGRAQDKIPVGFIAPAPLSSNISFNYPAFTVENTSGIMTRVRWINDLVDAKGNYL PHLLPVDQTLHWANPPATGCIDGTNRTECRTFNTAPYTGPVPLVTHVHGAHVNASSDGYPEAWWLPAAKNIPAGYAARGT VFDQFDPRNTVKGSAYFAYENDQPAATLWYHDHTLGITRNNVYAGPAGFWLVRGGANGDAFVDDGTSAALNDGRLPGPAP RAGMGDPNFNAAIRATIREIPVVIQDRSFNADGSLFYPDNRAFFEGLNVSGATPPQFPGAGVLNIPFIPNSDISAIWNPE VFFNTMVVNGTTWPQLESAPARYRLRLLNGCNSRTLNLTLFTVTGAGPDGIMGTADDVLGAEIPFYQIGAEQGFLPQVVM IKTGQYTPLPGNGAIPAGLAAPDPMQALLMGPAERADVIIDFTGLADGTVVRMINTAPDAPFGGFPDAPADIDTTGQVMQ FVVKASLIQPGDALTTPPENLVLPAEASLPATVAVRQLTLNEEESTRLCVQAQPDGSITTLFVDPMPLPGFLSACAAAGG MPMGPREAKLGVLVADPMTGMMMSMPMMWADIITEAPVTGTTEIWEIYNLTMDAHPIHPHLVRFEVVDRQPFDMMTFMPS GPAVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGLYVWHCHILEHEDNEMMRPYMVKIDPAFPDVNADGKLAVTDALDL LKKLKSPLLAGAPYDLTGDGTLDVRDVLALLRTIVFGPPR >Mature_839_residues TNVRVRIVAVVAVSIGLALFALGGPRKACSQPVPGGTLDPLTIPKFVTPLVIPPEMPKSTVQPGVPAAAYNIAVRQFKQQ ILPGGVWNTVNGRSDTFGATTVWSYGRAQDKIPVGFIAPAPLSSNISFNYPAFTVENTSGIMTRVRWINDLVDAKGNYLP HLLPVDQTLHWANPPATGCIDGTNRTECRTFNTAPYTGPVPLVTHVHGAHVNASSDGYPEAWWLPAAKNIPAGYAARGTV FDQFDPRNTVKGSAYFAYENDQPAATLWYHDHTLGITRNNVYAGPAGFWLVRGGANGDAFVDDGTSAALNDGRLPGPAPR AGMGDPNFNAAIRATIREIPVVIQDRSFNADGSLFYPDNRAFFEGLNVSGATPPQFPGAGVLNIPFIPNSDISAIWNPEV FFNTMVVNGTTWPQLESAPARYRLRLLNGCNSRTLNLTLFTVTGAGPDGIMGTADDVLGAEIPFYQIGAEQGFLPQVVMI KTGQYTPLPGNGAIPAGLAAPDPMQALLMGPAERADVIIDFTGLADGTVVRMINTAPDAPFGGFPDAPADIDTTGQVMQF VVKASLIQPGDALTTPPENLVLPAEASLPATVAVRQLTLNEEESTRLCVQAQPDGSITTLFVDPMPLPGFLSACAAAGGM PMGPREAKLGVLVADPMTGMMMSMPMMWADIITEAPVTGTTEIWEIYNLTMDAHPIHPHLVRFEVVDRQPFDMMTFMPSG PAVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGLYVWHCHILEHEDNEMMRPYMVKIDPAFPDVNADGKLAVTDALDLL KKLKSPLLAGAPYDLTGDGTLDVRDVLALLRTIVFGPPR
Specific function: Involved in brown pigmentation during sporogenesis [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To S.antibioticus phenoxazinone synthase (phsA) [H]
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 90104; Mature: 89973
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVRVRIVAVVAVSIGLALFALGGPRKACSQPVPGGTLDPLTIPKFVTPLVIPPEMPKS CCCEEEEEEHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHCCEEECCCCCHH TVQPGVPAAAYNIAVRQFKQQILPGGVWNTVNGRSDTFGATTVWSYGRAQDKIPVGFIAP HCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCEEEECC APLSSNISFNYPAFTVENTSGIMTRVRWINDLVDAKGNYLPHLLPVDQTLHWANPPATGC CCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCCCCCC IDGTNRTECRTFNTAPYTGPVPLVTHVHGAHVNASSDGYPEAWWLPAAKNIPAGYAARGT CCCCCCCEEEEECCCCCCCCCCEEEEECCCEECCCCCCCCCEEECCCCCCCCCCCCCCCC VFDQFDPRNTVKGSAYFAYENDQPAATLWYHDHTLGITRNNVYAGPAGFWLVRGGANGDA EECCCCCCCCCCCCEEEEEECCCCCEEEEEECEEEEEECCCEEECCCCEEEEEECCCCCC FVDDGTSAALNDGRLPGPAPRAGMGDPNFNAAIRATIREIPVVIQDRSFNADGSLFYPDN EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCEEECCC RAFFEGLNVSGATPPQFPGAGVLNIPFIPNSDISAIWNPEVFFNTMVVNGTTWPQLESAP CHHEECCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCC ARYRLRLLNGCNSRTLNLTLFTVTGAGPDGIMGTADDVLGAEIPFYQIGAEQGFLPQVVM HHEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEE IKTGQYTPLPGNGAIPAGLAAPDPMQALLMGPAERADVIIDFTGLADGTVVRMINTAPDA EECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCC PFGGFPDAPADIDTTGQVMQFVVKASLIQPGDALTTPPENLVLPAEASLPATVAVRQLTL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEC NEEESTRLCVQAQPDGSITTLFVDPMPLPGFLSACAAAGGMPMGPREAKLGVLVADPMTG CCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHH MMMSMPMMWADIITEAPVTGTTEIWEIYNLTMDAHPIHPHLVRFEVVDRQPFDMMTFMPS HHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCC GPAVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGLYVWHCHILEHEDNEMMRPYMVKID CCCCCCCHHHCCCCCEEEECCCCEEEEEEEHHHCCEEEEEEEEEECCCCCCCCCEEEEEC PAFPDVNADGKLAVTDALDLLKKLKSPLLAGAPYDLTGDGTLDVRDVLALLRTIVFGPPR CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNVRVRIVAVVAVSIGLALFALGGPRKACSQPVPGGTLDPLTIPKFVTPLVIPPEMPKS CCEEEEEEHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHCCEEECCCCCHH TVQPGVPAAAYNIAVRQFKQQILPGGVWNTVNGRSDTFGATTVWSYGRAQDKIPVGFIAP HCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCEEEECC APLSSNISFNYPAFTVENTSGIMTRVRWINDLVDAKGNYLPHLLPVDQTLHWANPPATGC CCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCCCCCC IDGTNRTECRTFNTAPYTGPVPLVTHVHGAHVNASSDGYPEAWWLPAAKNIPAGYAARGT CCCCCCCEEEEECCCCCCCCCCEEEEECCCEECCCCCCCCCEEECCCCCCCCCCCCCCCC VFDQFDPRNTVKGSAYFAYENDQPAATLWYHDHTLGITRNNVYAGPAGFWLVRGGANGDA EECCCCCCCCCCCCEEEEEECCCCCEEEEEECEEEEEECCCEEECCCCEEEEEECCCCCC FVDDGTSAALNDGRLPGPAPRAGMGDPNFNAAIRATIREIPVVIQDRSFNADGSLFYPDN EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCEEECCC RAFFEGLNVSGATPPQFPGAGVLNIPFIPNSDISAIWNPEVFFNTMVVNGTTWPQLESAP CHHEECCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCC ARYRLRLLNGCNSRTLNLTLFTVTGAGPDGIMGTADDVLGAEIPFYQIGAEQGFLPQVVM HHEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEE IKTGQYTPLPGNGAIPAGLAAPDPMQALLMGPAERADVIIDFTGLADGTVVRMINTAPDA EECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCC PFGGFPDAPADIDTTGQVMQFVVKASLIQPGDALTTPPENLVLPAEASLPATVAVRQLTL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEC NEEESTRLCVQAQPDGSITTLFVDPMPLPGFLSACAAAGGMPMGPREAKLGVLVADPMTG CCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHH MMMSMPMMWADIITEAPVTGTTEIWEIYNLTMDAHPIHPHLVRFEVVDRQPFDMMTFMPS HHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCC GPAVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGLYVWHCHILEHEDNEMMRPYMVKID CCCCCCCHHHCCCCCEEEECCCCEEEEEEEHHHCCEEEEEEEEEECCCCCCCCCEEEEEC PAFPDVNADGKLAVTDALDLLKKLKSPLLAGAPYDLTGDGTLDVRDVLALLRTIVFGPPR CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9455482; 9384377; 2821284; 3135411 [H]