| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997756
Identifier: 39997756
GI number: 39997756
Start: 2932790
End: 2934262
Strand: Reverse
Name: 39997756
Synonym: GSU2662
Alternate gene names: NA
Gene position: 2934262-2932790 (Counterclockwise)
Preceding gene: 39997757
Following gene: 39997751
Centisome position: 76.93
GC content: 64.83
Gene sequence:
>1473_bases ATGGAAATGGTAACCGTATCCTGTCCATCGTGTGGGTTCAACAAGTCAGTGCCCCGCTCGGCCATCCCGGCCGGAGCGAC CCACGTTAACTGTCCCCGCTGCAAGACCCGCTTCGCCTGGGAGGCATCGTCCGCCGCCGCGTCGCCCGTTCCTCCGGCGC CGCCGCGGCCTGCGGCAGCTCCTTCCGTAGCGCCGGGCATCCCCGTCCGCAAACCCGCCCCGCCCAAGCCGGAACCGGCC GGCAACGAGATGGTCGGGGTTGAAGAGCTCTTCCGCCTGGCGTGGGACACCTTCAAGCAGCGGTGGGGGACGCTTCTGGG GCTCTTTCTTCTGACGCCGCTTATGGCGTTGATTCCTGCCGGCATCTTCTTCGGGGCCTGCCACCTGCTGGCATCGGCCC TTCCCGCATCGCGCACGGTCCTGCTGGCTGTGGGGGGAATCGGCGCCGTGACCATGGCGCTGGTGGCCTACTCGTGGGGA TTCGGCGCTCTTATCTGCGCCACGGTGGATGATGAGGCCGACCTGCGGCGTGCCCTGGCCGAGGGGAAAAGGCTCCTCTG GCCCTATGTCTGGGTGTCGACGCTCCTGGGCATCATCATCGGCGGCGGGTTCCTGCTGGCGGTGATTCCGGGGATCATCT TCTCGGTCTGGTTCTTCTTCGCCCCCCTCATCCTGTTCGCCGAAGGGACCGGCGGCATGGACGCGGTGCTCAAGAGTCGC GAATATGTGCGCGGCCACTGGTTCGACGTCTTCGTGCGCCTCCTGATCATCTGGGGGCTTTCGGGCCTGTTGGGTCTCAT CCCGGTGGTGGGGCCGATAGTGTCGATCCTTCTCGCTCCCTTCGTAATGCTGGTCCAGGCCCTCATTTACCGGGACCTGC GGCGGGTGAAGGGTGACGTGCCCTATCCCTGCGGCAGTCGCGATAAGGCCGTCTGGGTCGGTATCGGCATCATGGGCTAC GTGGTTGTGCTGGGTGTAGGTGGGTACCTGGTGGCCAAATCGCCCCTGCTCCAGATGCTGAAGCAGGGAAAAGCGGGCGC CGGCCTTATGGTGCCGGTGCCGGCGAACCCGGGAGGGGAGGCCGGGACCATCTCCTTCGGGGACGGACCGTCCGGGAACC GGCCGTCGTCGCCCGAGAGCGTGAGCGCGGCGCTCGCCGATCAGGAACTTGCCGACTGCATGCTCTACGTCTATGCCCTG GACTACACCGGCACGGTAAAGGTAAACGGTGAGGAGCGCTACGTTATCAAGGGTGAGCGGAGCATGAACTACAACTACAC CGGCTCGGCCGGGCTCAAGCGAGGCGAGAACACCGTCACCGTTGACTACCAGACCCTTCCCGACACCCCTCTGCGCGAGA TTAAGATCAAGCTCTACCGGTATGACTGGGATGCCAAGCAGGAACACCTGATCGGTGAGTGGTCCCTGAACGATGAGGGG GGGAGCAGGAGCTACACGGTGCAGGTGGAGTAA
Upstream 100 bases:
>100_bases GCCTCAATCGGGCAAATTTCTCAAGCAAACCGCAACGATGCCGATACGATTCCAAGGACTAGTCCGCTTAAGGGCAGTGC GTGTCCAGGGGGTGTCTTTC
Downstream 100 bases:
>100_bases GCGCGCAGCGGTTGCGGCGTGGATAACGAAGACGAAAAGAGGGAGCCCCGGAGGGTTCCCTTTTTTCGTCTTCGGGCTGG TGACGGTGCGTTCCGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MEMVTVSCPSCGFNKSVPRSAIPAGATHVNCPRCKTRFAWEASSAAASPVPPAPPRPAAAPSVAPGIPVRKPAPPKPEPA GNEMVGVEELFRLAWDTFKQRWGTLLGLFLLTPLMALIPAGIFFGACHLLASALPASRTVLLAVGGIGAVTMALVAYSWG FGALICATVDDEADLRRALAEGKRLLWPYVWVSTLLGIIIGGGFLLAVIPGIIFSVWFFFAPLILFAEGTGGMDAVLKSR EYVRGHWFDVFVRLLIIWGLSGLLGLIPVVGPIVSILLAPFVMLVQALIYRDLRRVKGDVPYPCGSRDKAVWVGIGIMGY VVVLGVGGYLVAKSPLLQMLKQGKAGAGLMVPVPANPGGEAGTISFGDGPSGNRPSSPESVSAALADQELADCMLYVYAL DYTGTVKVNGEERYVIKGERSMNYNYTGSAGLKRGENTVTVDYQTLPDTPLREIKIKLYRYDWDAKQEHLIGEWSLNDEG GSRSYTVQVE
Sequences:
>Translated_490_residues MEMVTVSCPSCGFNKSVPRSAIPAGATHVNCPRCKTRFAWEASSAAASPVPPAPPRPAAAPSVAPGIPVRKPAPPKPEPA GNEMVGVEELFRLAWDTFKQRWGTLLGLFLLTPLMALIPAGIFFGACHLLASALPASRTVLLAVGGIGAVTMALVAYSWG FGALICATVDDEADLRRALAEGKRLLWPYVWVSTLLGIIIGGGFLLAVIPGIIFSVWFFFAPLILFAEGTGGMDAVLKSR EYVRGHWFDVFVRLLIIWGLSGLLGLIPVVGPIVSILLAPFVMLVQALIYRDLRRVKGDVPYPCGSRDKAVWVGIGIMGY VVVLGVGGYLVAKSPLLQMLKQGKAGAGLMVPVPANPGGEAGTISFGDGPSGNRPSSPESVSAALADQELADCMLYVYAL DYTGTVKVNGEERYVIKGERSMNYNYTGSAGLKRGENTVTVDYQTLPDTPLREIKIKLYRYDWDAKQEHLIGEWSLNDEG GSRSYTVQVE >Mature_490_residues MEMVTVSCPSCGFNKSVPRSAIPAGATHVNCPRCKTRFAWEASSAAASPVPPAPPRPAAAPSVAPGIPVRKPAPPKPEPA GNEMVGVEELFRLAWDTFKQRWGTLLGLFLLTPLMALIPAGIFFGACHLLASALPASRTVLLAVGGIGAVTMALVAYSWG FGALICATVDDEADLRRALAEGKRLLWPYVWVSTLLGIIIGGGFLLAVIPGIIFSVWFFFAPLILFAEGTGGMDAVLKSR EYVRGHWFDVFVRLLIIWGLSGLLGLIPVVGPIVSILLAPFVMLVQALIYRDLRRVKGDVPYPCGSRDKAVWVGIGIMGY VVVLGVGGYLVAKSPLLQMLKQGKAGAGLMVPVPANPGGEAGTISFGDGPSGNRPSSPESVSAALADQELADCMLYVYAL DYTGTVKVNGEERYVIKGERSMNYNYTGSAGLKRGENTVTVDYQTLPDTPLREIKIKLYRYDWDAKQEHLIGEWSLNDEG GSRSYTVQVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52499; Mature: 52499
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMVTVSCPSCGFNKSVPRSAIPAGATHVNCPRCKTRFAWEASSAAASPVPPAPPRPAAA CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC PSVAPGIPVRKPAPPKPEPAGNEMVGVEELFRLAWDTFKQRWGTLLGLFLLTPLMALIPA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIFFGACHLLASALPASRTVLLAVGGIGAVTMALVAYSWGFGALICATVDDEADLRRALA HHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH EGKRLLWPYVWVSTLLGIIIGGGFLLAVIPGIIFSVWFFFAPLILFAEGTGGMDAVLKSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHH EYVRGHWFDVFVRLLIIWGLSGLLGLIPVVGPIVSILLAPFVMLVQALIYRDLRRVKGDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYPCGSRDKAVWVGIGIMGYVVVLGVGGYLVAKSPLLQMLKQGKAGAGLMVPVPANPGGE CCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC AGTISFGDGPSGNRPSSPESVSAALADQELADCMLYVYALDYTGTVKVNGEERYVIKGER CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCEEEEEECCC SMNYNYTGSAGLKRGENTVTVDYQTLPDTPLREIKIKLYRYDWDAKQEHLIGEWSLNDEG CCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHEEEEEEEECCCCCHHHEEEEECCCCCC GSRSYTVQVE CCEEEEEEEC >Mature Secondary Structure MEMVTVSCPSCGFNKSVPRSAIPAGATHVNCPRCKTRFAWEASSAAASPVPPAPPRPAAA CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC PSVAPGIPVRKPAPPKPEPAGNEMVGVEELFRLAWDTFKQRWGTLLGLFLLTPLMALIPA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIFFGACHLLASALPASRTVLLAVGGIGAVTMALVAYSWGFGALICATVDDEADLRRALA HHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH EGKRLLWPYVWVSTLLGIIIGGGFLLAVIPGIIFSVWFFFAPLILFAEGTGGMDAVLKSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHH EYVRGHWFDVFVRLLIIWGLSGLLGLIPVVGPIVSILLAPFVMLVQALIYRDLRRVKGDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYPCGSRDKAVWVGIGIMGYVVVLGVGGYLVAKSPLLQMLKQGKAGAGLMVPVPANPGGE CCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC AGTISFGDGPSGNRPSSPESVSAALADQELADCMLYVYALDYTGTVKVNGEERYVIKGER CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCEEEEEECCC SMNYNYTGSAGLKRGENTVTVDYQTLPDTPLREIKIKLYRYDWDAKQEHLIGEWSLNDEG CCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHEEEEEEEECCCCCHHHEEEEECCCCCC GSRSYTVQVE CCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA