| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997621
Identifier: 39997621
GI number: 39997621
Start: 2783754
End: 2784488
Strand: Reverse
Name: 39997621
Synonym: GSU2526
Alternate gene names: NA
Gene position: 2784488-2783754 (Counterclockwise)
Preceding gene: 39997622
Following gene: 39997620
Centisome position: 73.0
GC content: 57.14
Gene sequence:
>735_bases GTGGAGTTTCTCCATAATGTCACCATAGTGACTATCGTTGAGGTCTTCTTCTGGCTGATCGCCGCCATCATCAGCATCTA TTTCAGCATCGGCAACGCCCGCCTCTGGACTAGCATCGCCATCGGCTTCTGCCTCATTTTCTTCAGCCAGGTCTACGCGC TCAACCCCTTTTCCATGTACCACCATCTGGCGGCGATCCACTACGTGATCAGCACCATCGCCATCATTGTGCTGACATTC GGGTTCAGGGAGTACTACCTCTTCACCCGGACCCTTGAAATAACCGGCAGCAAGCGCACCGTTGCCATCCTGACCGTGGG GGCCATCGCACTGTCGGCCCTGCTCATTTACACCAACCCGCCGCCGTCCGATTACGTCCTGCGCCAGATCAGGATGATCG ACAACGCCAACTGGGTTTTTCTTTCCATCGTCAACTTCGACATGATTCTGAAGATTTACCGCCAGATCAAGGACTCCCCC ATCTCCGGCGGATTCATCGCCTTCGGGGTTGCCTTTGTCTGCCTGTTCCTCTGGAAGGGGTCGGCCCTCTACCTCCAGGT CTACCAGTGGGACCCGGAGTGGGTTGACCTGATCGAATTCCTGGGCGGGGCTTCCAACGCGGCCGACTTTCCGGGCCGGA TAGCCTTTTCCATGTCGGTCCACCAGGCCATGAGCCTCGTTTCGGCCATGACGGTGGGAGGATCGTTCATCTACCTGTGG CGGTTGATGCGCTGA
Upstream 100 bases:
>100_bases GTAGTGCGAAAGATCTGCAATGGCCGTAACTCTCCGGAGAAGCTTTTATTTCGCGGAGAGGGCCGCAGTGTCGGTGTAAG CCAATTGACGGGAGGTTGAC
Downstream 100 bases:
>100_bases TGGAACTGCTCGAGGGAATTCTTTCGCGCCGCAGCGTGCGGCAATTCACCGATGAACCGGTGAGCCCCGCAGAGGTGGAG GATATCCTCCGGGCCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MEFLHNVTIVTIVEVFFWLIAAIISIYFSIGNARLWTSIAIGFCLIFFSQVYALNPFSMYHHLAAIHYVISTIAIIVLTF GFREYYLFTRTLEITGSKRTVAILTVGAIALSALLIYTNPPPSDYVLRQIRMIDNANWVFLSIVNFDMILKIYRQIKDSP ISGGFIAFGVAFVCLFLWKGSALYLQVYQWDPEWVDLIEFLGGASNAADFPGRIAFSMSVHQAMSLVSAMTVGGSFIYLW RLMR
Sequences:
>Translated_244_residues MEFLHNVTIVTIVEVFFWLIAAIISIYFSIGNARLWTSIAIGFCLIFFSQVYALNPFSMYHHLAAIHYVISTIAIIVLTF GFREYYLFTRTLEITGSKRTVAILTVGAIALSALLIYTNPPPSDYVLRQIRMIDNANWVFLSIVNFDMILKIYRQIKDSP ISGGFIAFGVAFVCLFLWKGSALYLQVYQWDPEWVDLIEFLGGASNAADFPGRIAFSMSVHQAMSLVSAMTVGGSFIYLW RLMR >Mature_244_residues MEFLHNVTIVTIVEVFFWLIAAIISIYFSIGNARLWTSIAIGFCLIFFSQVYALNPFSMYHHLAAIHYVISTIAIIVLTF GFREYYLFTRTLEITGSKRTVAILTVGAIALSALLIYTNPPPSDYVLRQIRMIDNANWVFLSIVNFDMILKIYRQIKDSP ISGGFIAFGVAFVCLFLWKGSALYLQVYQWDPEWVDLIEFLGGASNAADFPGRIAFSMSVHQAMSLVSAMTVGGSFIYLW RLMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27666; Mature: 27666
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLHNVTIVTIVEVFFWLIAAIISIYFSIGNARLWTSIAIGFCLIFFSQVYALNPFSMY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH HHLAAIHYVISTIAIIVLTFGFREYYLFTRTLEITGSKRTVAILTVGAIALSALLIYTNP HHHHHHHHHHHHHHHHHHHHCHHHHEEEEEEEEEECCCCEEEEEEHHHHHHHHEEEEECC PPSDYVLRQIRMIDNANWVFLSIVNFDMILKIYRQIKDSPISGGFIAFGVAFVCLFLWKG CCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC SALYLQVYQWDPEWVDLIEFLGGASNAADFPGRIAFSMSVHQAMSLVSAMTVGGSFIYLW CEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHH RLMR HHCC >Mature Secondary Structure MEFLHNVTIVTIVEVFFWLIAAIISIYFSIGNARLWTSIAIGFCLIFFSQVYALNPFSMY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH HHLAAIHYVISTIAIIVLTFGFREYYLFTRTLEITGSKRTVAILTVGAIALSALLIYTNP HHHHHHHHHHHHHHHHHHHHCHHHHEEEEEEEEEECCCCEEEEEEHHHHHHHHEEEEECC PPSDYVLRQIRMIDNANWVFLSIVNFDMILKIYRQIKDSPISGGFIAFGVAFVCLFLWKG CCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC SALYLQVYQWDPEWVDLIEFLGGASNAADFPGRIAFSMSVHQAMSLVSAMTVGGSFIYLW CEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHH RLMR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA