| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997594
Identifier: 39997594
GI number: 39997594
Start: 2749085
End: 2751262
Strand: Reverse
Name: 39997594
Synonym: GSU2499
Alternate gene names: NA
Gene position: 2751262-2749085 (Counterclockwise)
Preceding gene: 39997596
Following gene: 39997593
Centisome position: 72.13
GC content: 63.04
Gene sequence:
>2178_bases ATGCGGATACTCCACGGGTTCATGGCAGCAGCGGCCCTCGCGGCCGCGCTGCTGCCGGCCACGGCGGGGGCCGAGGGGCT GCGGGGGTTCCTGGAGCTGAGCTACGTCAATTCCGACAACCAATCGACGGATGCCGGCAATGTGACCACGACCACCAAGA GCAGCTCGATCCTACAGCGCTACAACCTGTCCCTGGACCGGATGCTCTACCCGACCCTGCGCTTCACGGGCGGCGGCACT GTCGACTACACCATGACCCGTGCGGAGTTGAACGACAACCAGCTCGATACCACCCTGCTGAAGGTGAGCCCCTTCCTGGA CCTGACCCTGGGCACCCCCCTCTATTCCGCGGGACTGGGCTACAACCGGCGCCAGGAGATTTCCGATACCGAGGGGATCG CCTCGTCCAACATCATCCACGAGAACTACAACGCCAAGCTGAGCCTCAGACCCGAGGGGCTCCCCTCCCTGGAGTTCCTC TATACGCGGACCAATTCCTACGATGCCGACCGGCAGTTCCAGGATGTGGTGCTCAATTCGTACAACCTGGGTTCCCGCTA TAAGCCGGTGGAGCAGGTGGAGCTGAACTACCAGGGGCTCTATACCGATGCCACGGACAACCTGACCCGGAACAACACCA CGGTCCTGACCCACACCGGCCGGGTGACCTACAACGACCAGTTCTGGCAGGACCGGGTCACCCTCTACGCCAACTACAAC ATCTCGTCCCAGGAGACCAACAGTGCCCTGTTCCGGCTCTTTCCCACGGCCGGCCTGTCGGCCCTGACCGATACGCCCCT GCTGGTCACCCTGGCCGCCAACCCGGCGCTGGTGGACGGGAACCTGAACACGGGGAGCAACGTCACCATCGGCATCCAGC CGGTGGGGGGCGACATCAGGCCCCGGAACCTGGGCTTCGACTTCGGCGGCGCGGTGACCGTGAACCGCATCCGCGTCTGG CTCAACACGGACCTCCCCTCGGACATCGAGAACCGGTTCTCCTGGACGATCTACACCAGCAGCGACAACCTGAACTGGAC CCTGGTGCAGCTCCTGCCCTCGGCACCGTTCAGGAGCAACGAGGCGGGCACCGGCTGGTTCTACGAGCTGGGCTTTTCCG GCGCCACCTCCCGGTACCTGAAGGTCGTTACCTCGCCCCTGCCCCTGGGCACCGTTTCGCTGGTGAACCCCACCGCGAAC CTGACCGACATCCAGGTGACCGAGCTGGAAGGGTTCGTCCAGTTCGAGGATGTCCAGCGACGCACCACGAGCCAGGTCTC CCACGTGCTCGACACCAACATGCGGGTGAGGATCCTGGAAAATCCGAACCTGAACTACGAGCTGAGCTACTACTACGACC GGAGTGACTCGGACTTCTTCTCCACCTCCCGCTACATCCTGTCGAACGGTCTTTCCGCGAGCCACCGGTTCAATCAGTAC CTGTCGACCAGCGCCCGGTTCGCCCGGGAGGACTCCAAGGAGAATCAGGGCGCCCGCGTCTCCTACATCTACAGTGCCCT GCTGACGGCCACCCCGCTCCCCACGCTGACCCACAGCCTGGTCTTCAGCGGCCGCAACGAGGAGATCGACGGGAGGAAAA GCGACACCAATTCGCTGTTCCTCAACAACAGCGCCACCCTCTACCAAGGGGTGGACGTGAACCTGAACGGGGGCTACAGC ATGGCCACCGCCGAGTCGGGCCAGAAGACCAATACCACCATCGTCACCTTCGGCCTCACCCTGCTGCCCCACTCGACCCT GACGGTGAACGCGAGCTATTCCGGCAACATGACCGAACAGACCGGCGGCGGCTTGCCCGACAACTCCACCTTCACCCACC GCGGCGACCTGTCGGCGGCCTTCAACCCGCTGCGCTCCGTCTACCTGTTCGGGGCCTTCGGCGTTATCATGGAAAAGAAC AAGGACATGGTCACCACCCGGAACATCGGCGGAACCTGGTCTCCGTTCCGGGACGGCGCCCTGCAGTTGAGTTTTTCCTA TAATGAGGCGTACAATTCATCTGCCAACCAGAAGGACCGGACCATCGTGCCGAGTATGCGCTGGAACATCCGGGGGGGCT CCTACCTGGATATGTCCTATCTGTACCTGAAGAGCACGTCGGTCAGCCAGTCGTCCGAGTCGCGCACCTTCAGCAGCACC CTGAGATTCGCGTTCTGA
Upstream 100 bases:
>100_bases CATCGGCCTGGTGGGCAAGCGGGAGGTGGCGCAGATCGACGTGGGCGACGAGCCCTGCCGCGTGGTCGTGGCGGGCGAAA GGTAAGGCGTGGGCAACGGG
Downstream 100 bases:
>100_bases TTTCCACGGAGAGAGGGCATATATGAGATCACGATTCGTCACCCACACCGGCGCCCTGATGCGGGCATTCTGCGGAATCT TCGGCCTCTTTGCGTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MRILHGFMAAAALAAALLPATAGAEGLRGFLELSYVNSDNQSTDAGNVTTTTKSSSILQRYNLSLDRMLYPTLRFTGGGT VDYTMTRAELNDNQLDTTLLKVSPFLDLTLGTPLYSAGLGYNRRQEISDTEGIASSNIIHENYNAKLSLRPEGLPSLEFL YTRTNSYDADRQFQDVVLNSYNLGSRYKPVEQVELNYQGLYTDATDNLTRNNTTVLTHTGRVTYNDQFWQDRVTLYANYN ISSQETNSALFRLFPTAGLSALTDTPLLVTLAANPALVDGNLNTGSNVTIGIQPVGGDIRPRNLGFDFGGAVTVNRIRVW LNTDLPSDIENRFSWTIYTSSDNLNWTLVQLLPSAPFRSNEAGTGWFYELGFSGATSRYLKVVTSPLPLGTVSLVNPTAN LTDIQVTELEGFVQFEDVQRRTTSQVSHVLDTNMRVRILENPNLNYELSYYYDRSDSDFFSTSRYILSNGLSASHRFNQY LSTSARFAREDSKENQGARVSYIYSALLTATPLPTLTHSLVFSGRNEEIDGRKSDTNSLFLNNSATLYQGVDVNLNGGYS MATAESGQKTNTTIVTFGLTLLPHSTLTVNASYSGNMTEQTGGGLPDNSTFTHRGDLSAAFNPLRSVYLFGAFGVIMEKN KDMVTTRNIGGTWSPFRDGALQLSFSYNEAYNSSANQKDRTIVPSMRWNIRGGSYLDMSYLYLKSTSVSQSSESRTFSST LRFAF
Sequences:
>Translated_725_residues MRILHGFMAAAALAAALLPATAGAEGLRGFLELSYVNSDNQSTDAGNVTTTTKSSSILQRYNLSLDRMLYPTLRFTGGGT VDYTMTRAELNDNQLDTTLLKVSPFLDLTLGTPLYSAGLGYNRRQEISDTEGIASSNIIHENYNAKLSLRPEGLPSLEFL YTRTNSYDADRQFQDVVLNSYNLGSRYKPVEQVELNYQGLYTDATDNLTRNNTTVLTHTGRVTYNDQFWQDRVTLYANYN ISSQETNSALFRLFPTAGLSALTDTPLLVTLAANPALVDGNLNTGSNVTIGIQPVGGDIRPRNLGFDFGGAVTVNRIRVW LNTDLPSDIENRFSWTIYTSSDNLNWTLVQLLPSAPFRSNEAGTGWFYELGFSGATSRYLKVVTSPLPLGTVSLVNPTAN LTDIQVTELEGFVQFEDVQRRTTSQVSHVLDTNMRVRILENPNLNYELSYYYDRSDSDFFSTSRYILSNGLSASHRFNQY LSTSARFAREDSKENQGARVSYIYSALLTATPLPTLTHSLVFSGRNEEIDGRKSDTNSLFLNNSATLYQGVDVNLNGGYS MATAESGQKTNTTIVTFGLTLLPHSTLTVNASYSGNMTEQTGGGLPDNSTFTHRGDLSAAFNPLRSVYLFGAFGVIMEKN KDMVTTRNIGGTWSPFRDGALQLSFSYNEAYNSSANQKDRTIVPSMRWNIRGGSYLDMSYLYLKSTSVSQSSESRTFSST LRFAF >Mature_725_residues MRILHGFMAAAALAAALLPATAGAEGLRGFLELSYVNSDNQSTDAGNVTTTTKSSSILQRYNLSLDRMLYPTLRFTGGGT VDYTMTRAELNDNQLDTTLLKVSPFLDLTLGTPLYSAGLGYNRRQEISDTEGIASSNIIHENYNAKLSLRPEGLPSLEFL YTRTNSYDADRQFQDVVLNSYNLGSRYKPVEQVELNYQGLYTDATDNLTRNNTTVLTHTGRVTYNDQFWQDRVTLYANYN ISSQETNSALFRLFPTAGLSALTDTPLLVTLAANPALVDGNLNTGSNVTIGIQPVGGDIRPRNLGFDFGGAVTVNRIRVW LNTDLPSDIENRFSWTIYTSSDNLNWTLVQLLPSAPFRSNEAGTGWFYELGFSGATSRYLKVVTSPLPLGTVSLVNPTAN LTDIQVTELEGFVQFEDVQRRTTSQVSHVLDTNMRVRILENPNLNYELSYYYDRSDSDFFSTSRYILSNGLSASHRFNQY LSTSARFAREDSKENQGARVSYIYSALLTATPLPTLTHSLVFSGRNEEIDGRKSDTNSLFLNNSATLYQGVDVNLNGGYS MATAESGQKTNTTIVTFGLTLLPHSTLTVNASYSGNMTEQTGGGLPDNSTFTHRGDLSAAFNPLRSVYLFGAFGVIMEKN KDMVTTRNIGGTWSPFRDGALQLSFSYNEAYNSSANQKDRTIVPSMRWNIRGGSYLDMSYLYLKSTSVSQSSESRTFSST LRFAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80177; Mature: 80177
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILHGFMAAAALAAALLPATAGAEGLRGFLELSYVNSDNQSTDAGNVTTTTKSSSILQR CCHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEEECCCCCCCCCCCEEEECCHHHHHHH YNLSLDRMLYPTLRFTGGGTVDYTMTRAELNDNQLDTTLLKVSPFLDLTLGTPLYSAGLG HCCCHHHEECCEEEECCCCEEEEEEEEEECCCCCCEEEEEEECCCEEEEECCCHHHCCCC YNRRQEISDTEGIASSNIIHENYNAKLSLRPEGLPSLEFLYTRTNSYDADRQFQDVVLNS CCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCC YNLGSRYKPVEQVELNYQGLYTDATDNLTRNNTTVLTHTGRVTYNDQFWQDRVTLYANYN CCCCCCCCCHHHEEECEEEEEECCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEEECC ISSQETNSALFRLFPTAGLSALTDTPLLVTLAANPALVDGNLNTGSNVTIGIQPVGGDIR CCCCCCCCEEEEEECCCCCHHHCCCCEEEEEECCCEEEECCCCCCCEEEEEEEECCCCCC PRNLGFDFGGAVTVNRIRVWLNTDLPSDIENRFSWTIYTSSDNLNWTLVQLLPSAPFRSN CCCCCCCCCCEEEEEEEEEEEECCCCCCHHCCEEEEEEECCCCCCEEEEEEECCCCCCCC EAGTGWFYELGFSGATSRYLKVVTSPLPLGTVSLVNPTANLTDIQVTELEGFVQFEDVQR CCCCCEEEEECCCCCCCHHHHEECCCCCCCEEEEECCCCCCEEEEEEECCCEEEHHHHHH RTTSQVSHVLDTNMRVRILENPNLNYELSYYYDRSDSDFFSTSRYILSNGLSASHRFNQY HHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHH LSTSARFAREDSKENQGARVSYIYSALLTATPLPTLTHSLVFSGRNEEIDGRKSDTNSLF HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHEECCCCCCCCCCCCCCCEEE LNNSATLYQGVDVNLNGGYSMATAESGQKTNTTIVTFGLTLLPHSTLTVNASYSGNMTEQ ECCCCEEEEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCC TGGGLPDNSTFTHRGDLSAAFNPLRSVYLFGAFGVIMEKNKDMVTTRNIGGTWSPFRDGA CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCCE LQLSFSYNEAYNSSANQKDRTIVPSMRWNIRGGSYLDMSYLYLKSTSVSQSSESRTFSST EEEEEEECHHHCCCCCCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCHHHH LRFAF HEECC >Mature Secondary Structure MRILHGFMAAAALAAALLPATAGAEGLRGFLELSYVNSDNQSTDAGNVTTTTKSSSILQR CCHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEEECCCCCCCCCCCEEEECCHHHHHHH YNLSLDRMLYPTLRFTGGGTVDYTMTRAELNDNQLDTTLLKVSPFLDLTLGTPLYSAGLG HCCCHHHEECCEEEECCCCEEEEEEEEEECCCCCCEEEEEEECCCEEEEECCCHHHCCCC YNRRQEISDTEGIASSNIIHENYNAKLSLRPEGLPSLEFLYTRTNSYDADRQFQDVVLNS CCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCC YNLGSRYKPVEQVELNYQGLYTDATDNLTRNNTTVLTHTGRVTYNDQFWQDRVTLYANYN CCCCCCCCCHHHEEECEEEEEECCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEEECC ISSQETNSALFRLFPTAGLSALTDTPLLVTLAANPALVDGNLNTGSNVTIGIQPVGGDIR CCCCCCCCEEEEEECCCCCHHHCCCCEEEEEECCCEEEECCCCCCCEEEEEEEECCCCCC PRNLGFDFGGAVTVNRIRVWLNTDLPSDIENRFSWTIYTSSDNLNWTLVQLLPSAPFRSN CCCCCCCCCCEEEEEEEEEEEECCCCCCHHCCEEEEEEECCCCCCEEEEEEECCCCCCCC EAGTGWFYELGFSGATSRYLKVVTSPLPLGTVSLVNPTANLTDIQVTELEGFVQFEDVQR CCCCCEEEEECCCCCCCHHHHEECCCCCCCEEEEECCCCCCEEEEEEECCCEEEHHHHHH RTTSQVSHVLDTNMRVRILENPNLNYELSYYYDRSDSDFFSTSRYILSNGLSASHRFNQY HHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHH LSTSARFAREDSKENQGARVSYIYSALLTATPLPTLTHSLVFSGRNEEIDGRKSDTNSLF HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHEECCCCCCCCCCCCCCCEEE LNNSATLYQGVDVNLNGGYSMATAESGQKTNTTIVTFGLTLLPHSTLTVNASYSGNMTEQ ECCCCEEEEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCC TGGGLPDNSTFTHRGDLSAAFNPLRSVYLFGAFGVIMEKNKDMVTTRNIGGTWSPFRDGA CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCCE LQLSFSYNEAYNSSANQKDRTIVPSMRWNIRGGSYLDMSYLYLKSTSVSQSSESRTFSST EEEEEEECHHHCCCCCCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCHHHH LRFAF HEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA