Click here to switch to the map view.

The map label for this gene is 39997593

Identifier: 39997593

GI number: 39997593

Start: 2748463

End: 2749062

Strand: Reverse

Name: 39997593

Synonym: GSU2498

Alternate gene names: NA

Gene position: 2749062-2748463 (Counterclockwise)

Preceding gene: 39997594

Following gene: 39997592

Centisome position: 72.08

GC content: 64.83

Gene sequence:

>600_bases
ATGAGATCACGATTCGTCACCCACACCGGCGCCCTGATGCGGGCATTCTGCGGAATCTTCGGCCTCTTTGCGTTCCTGCT
GATGCAGGGCTGTTCCCACGTGGAGCATTTCCGGGACCCCAACATGGACTTCGGGGCGATCCAGAGCGTGGCGGTGATGC
CCTTCGGCAACCTGTCCAAGGACACCCAGGCCGCGGAGCGGGTCAGGGACGTGTTCAACACCAAGCTGCTGGCCACGGGG
GCCCTCTACGTCATCCCCGTGGGCGAGGTCAGCCGGGTGACGGGGGTGGCCGGCGTCATGAACCCCACTGCCCCCACCCC
CGAGGAAGTGGTTAAGCTGGCCAAGATGATCAAGGCCGACGCGGTCATTACGGGCATGGTACGGGAGTACGGCGACGTCC
GCTCGGGCTCGTCCATGGCCGACGTTATCTCCCTGAGCCTCCAGGTGATGGAGGCCCAGACCGGGAGGGTCGTCTGGTCC
GCATCGGCCACGGAGGGGGGGATCGGGTTCACGGACCGCCTTCTCGGCGGCGGCGGCAGGCCCCTCAACGATGTGACTGA
GAAAGCGGTCGATGATCTCATCTCGAAGCTGTTCCAATAG

Upstream 100 bases:

>100_bases
CTGTACCTGAAGAGCACGTCGGTCAGCCAGTCGTCCGAGTCGCGCACCTTCAGCAGCACCCTGAGATTCGCGTTCTGATT
TCCACGGAGAGAGGGCATAT

Downstream 100 bases:

>100_bases
ACTGCTCGCACTGCTGCCGCTGGTTCTGCTCCTCCTGGCGGCGGGATGCGCGCGTCTTTCCGTGGAGGCCGGCCGGCCGT
CCGGTCCGCTGGTGGCGGTC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRSRFVTHTGALMRAFCGIFGLFAFLLMQGCSHVEHFRDPNMDFGAIQSVAVMPFGNLSKDTQAAERVRDVFNTKLLATG
ALYVIPVGEVSRVTGVAGVMNPTAPTPEEVVKLAKMIKADAVITGMVREYGDVRSGSSMADVISLSLQVMEAQTGRVVWS
ASATEGGIGFTDRLLGGGGRPLNDVTEKAVDDLISKLFQ

Sequences:

>Translated_199_residues
MRSRFVTHTGALMRAFCGIFGLFAFLLMQGCSHVEHFRDPNMDFGAIQSVAVMPFGNLSKDTQAAERVRDVFNTKLLATG
ALYVIPVGEVSRVTGVAGVMNPTAPTPEEVVKLAKMIKADAVITGMVREYGDVRSGSSMADVISLSLQVMEAQTGRVVWS
ASATEGGIGFTDRLLGGGGRPLNDVTEKAVDDLISKLFQ
>Mature_199_residues
MRSRFVTHTGALMRAFCGIFGLFAFLLMQGCSHVEHFRDPNMDFGAIQSVAVMPFGNLSKDTQAAERVRDVFNTKLLATG
ALYVIPVGEVSRVTGVAGVMNPTAPTPEEVVKLAKMIKADAVITGMVREYGDVRSGSSMADVISLSLQVMEAQTGRVVWS
ASATEGGIGFTDRLLGGGGRPLNDVTEKAVDDLISKLFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21289; Mature: 21289

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRFVTHTGALMRAFCGIFGLFAFLLMQGCSHVEHFRDPNMDFGAIQSVAVMPFGNLSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCH
DTQAAERVRDVFNTKLLATGALYVIPVGEVSRVTGVAGVMNPTAPTPEEVVKLAKMIKAD
HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AVITGMVREYGDVRSGSSMADVISLSLQVMEAQTGRVVWSASATEGGIGFTDRLLGGGGR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCC
PLNDVTEKAVDDLISKLFQ
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSRFVTHTGALMRAFCGIFGLFAFLLMQGCSHVEHFRDPNMDFGAIQSVAVMPFGNLSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCH
DTQAAERVRDVFNTKLLATGALYVIPVGEVSRVTGVAGVMNPTAPTPEEVVKLAKMIKAD
HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
AVITGMVREYGDVRSGSSMADVISLSLQVMEAQTGRVVWSASATEGGIGFTDRLLGGGGR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCC
PLNDVTEKAVDDLISKLFQ
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA