| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is arcC [H]
Identifier: 39997582
GI number: 39997582
Start: 2731633
End: 2732577
Strand: Reverse
Name: arcC [H]
Synonym: GSU2487
Alternate gene names: 39997582
Gene position: 2732577-2731633 (Counterclockwise)
Preceding gene: 308513323
Following gene: 39997581
Centisome position: 71.64
GC content: 70.69
Gene sequence:
>945_bases ATGACCGACAGCCCGACCCGGCCCATCCTGCTGGTTGCCCTCGGCGGCAACGCCCTGATCCGCCCTGGCGAACGGGGGAC CTGCGCGGAGCAGTTCGCCAACCTGCGGCGTCCCATGGGGCAGATCGCCCGGTTGACCGACCGGTACCGGCTCATCATCA CCCACGGCAACGGGCCCCAGGTGGGCAACCTCCTCATGCAGCAGGAGTCATGCGCCGAGGTGCCGGCCATGCCCCTGGAG ATCCTGGTGGCCCAGACCCAGGGGCAGATCGGCTACATGATCGAATCGACCCTGGAGAGCGAACTCCTGGCCCTGGGCGG GGCGAAGCGGTGCCTGGTGAGCCTGATCAGCTACGTGCAGGTGGCGGAGGACGATCCCGCGTTCCGCACCCCCACCAAGC CCATCGGCCCCCACTACACGGCGGAGGAGGCCGCGCGCTTCACCTGGCCCATGGTGAGCACCCCCCGGGGATTCCGCCGG GTGGTGGCCTCGCCCGAGCCCCTGACCGTGGTGGAGAAGGACGAGATCCAACGGCTGGTGGAGATGGATTTCATCGTGGT CTGCTGCGGGGGCGGCGGCATCCCCGTGACCCGGGAGGGCCGCGCCTTTCACGGCGTGGATGCGGTGATCGACAAGGACC TGGCCAGCGCCTGCCTCGGCCGGGAAGTGGGGGTGGATACCCTGGTCATCGCCACGGACGTGGCCGGGGTGGCCACCGGC TTCGGCACGGCAGGGGAGACGTTCCTGCGGCGGCTGGACGCGGCGCGGGCGGAGCAGTTGCTGGCGGCGGGCGAGTTTCC TCCCGGCTCCATGGGGCCGAAGGTGGAGGCGGCCGTCCGCTTTGTCCGGGGGGGCGGCACGCGGGCCGTCATCTGCCATC TGGACGAGATCGAGGCCGCGGTGGCGGGAACGGCGGGGACTGAGATAACCGGAGGGACGACATGA
Upstream 100 bases:
>100_bases CCTGCATCCGGCCGATCCCTGTGGTACCATTCCAGAGTCATTCATGAAAACCGCGCCCCGGCACCGGCCGCGGCAGACAG ATCACCACAGGGGAGAACCC
Downstream 100 bases:
>100_bases AGCGGAAACGGATCATCATCATGGGGGCGGCCGGGCGGGACTTTCACAACTTCAACTGCTGCTTCCGGGACAACCCGGCC TGCCGGGTGGTGGCCTTCAC
Product: carbamate kinase
Products: NA
Alternate protein names: Carbamate kinase-like carbamoylphosphate synthase [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTDSPTRPILLVALGGNALIRPGERGTCAEQFANLRRPMGQIARLTDRYRLIITHGNGPQVGNLLMQQESCAEVPAMPLE ILVAQTQGQIGYMIESTLESELLALGGAKRCLVSLISYVQVAEDDPAFRTPTKPIGPHYTAEEAARFTWPMVSTPRGFRR VVASPEPLTVVEKDEIQRLVEMDFIVVCCGGGGIPVTREGRAFHGVDAVIDKDLASACLGREVGVDTLVIATDVAGVATG FGTAGETFLRRLDAARAEQLLAAGEFPPGSMGPKVEAAVRFVRGGGTRAVICHLDEIEAAVAGTAGTEITGGTT
Sequences:
>Translated_314_residues MTDSPTRPILLVALGGNALIRPGERGTCAEQFANLRRPMGQIARLTDRYRLIITHGNGPQVGNLLMQQESCAEVPAMPLE ILVAQTQGQIGYMIESTLESELLALGGAKRCLVSLISYVQVAEDDPAFRTPTKPIGPHYTAEEAARFTWPMVSTPRGFRR VVASPEPLTVVEKDEIQRLVEMDFIVVCCGGGGIPVTREGRAFHGVDAVIDKDLASACLGREVGVDTLVIATDVAGVATG FGTAGETFLRRLDAARAEQLLAAGEFPPGSMGPKVEAAVRFVRGGGTRAVICHLDEIEAAVAGTAGTEITGGTT >Mature_313_residues TDSPTRPILLVALGGNALIRPGERGTCAEQFANLRRPMGQIARLTDRYRLIITHGNGPQVGNLLMQQESCAEVPAMPLEI LVAQTQGQIGYMIESTLESELLALGGAKRCLVSLISYVQVAEDDPAFRTPTKPIGPHYTAEEAARFTWPMVSTPRGFRRV VASPEPLTVVEKDEIQRLVEMDFIVVCCGGGGIPVTREGRAFHGVDAVIDKDLASACLGREVGVDTLVIATDVAGVATGF GTAGETFLRRLDAARAEQLLAAGEFPPGSMGPKVEAAVRFVRGGGTRAVICHLDEIEAAVAGTAGTEITGGTT
Specific function: Arginine degradation via arginine deiminase; third step. [C]
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786732, Length=305, Percent_Identity=41.3114754098361, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI1789238, Length=310, Percent_Identity=40.3225806451613, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1786516, Length=314, Percent_Identity=39.171974522293, Blast_Score=176, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 - InterPro: IPR023000 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 33224; Mature: 33092
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSPTRPILLVALGGNALIRPGERGTCAEQFANLRRPMGQIARLTDRYRLIITHGNGPQ CCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC VGNLLMQQESCAEVPAMPLEILVAQTQGQIGYMIESTLESELLALGGAKRCLVSLISYVQ HHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VAEDDPAFRTPTKPIGPHYTAEEAARFTWPMVSTPRGFRRVVASPEPLTVVEKDEIQRLV HCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHHHHCCCCCEEEECHHHHHHHH EMDFIVVCCGGGGIPVTREGRAFHGVDAVIDKDLASACLGREVGVDTLVIATDVAGVATG HCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHC FGTAGETFLRRLDAARAEQLLAAGEFPPGSMGPKVEAAVRFVRGGGTRAVICHLDEIEAA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHH VAGTAGTEITGGTT HCCCCCCCCCCCCC >Mature Secondary Structure TDSPTRPILLVALGGNALIRPGERGTCAEQFANLRRPMGQIARLTDRYRLIITHGNGPQ CCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC VGNLLMQQESCAEVPAMPLEILVAQTQGQIGYMIESTLESELLALGGAKRCLVSLISYVQ HHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VAEDDPAFRTPTKPIGPHYTAEEAARFTWPMVSTPRGFRRVVASPEPLTVVEKDEIQRLV HCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHHHHCCCCCEEEECHHHHHHHH EMDFIVVCCGGGGIPVTREGRAFHGVDAVIDKDLASACLGREVGVDTLVIATDVAGVATG HCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHC FGTAGETFLRRLDAARAEQLLAAGEFPPGSMGPKVEAAVRFVRGGGTRAVICHLDEIEAA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHH VAGTAGTEITGGTT HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11523892; 12622808 [H]