| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 308513323
Identifier: 308513323
GI number: 308513323
Start: 2741307
End: 2742089
Strand: Reverse
Name: 308513323
Synonym: NA
Alternate gene names: NA
Gene position: 2742089-2741307 (Counterclockwise)
Preceding gene: 39997589
Following gene: 39997582
Centisome position: 71.89
GC content: 63.98
Gene sequence:
>783_bases ATGAAGGCCCCCGAGGGGATAGCCTGCGGCAAGAGGCAGCTGGTGGTTTCCGACACCGGCGGCGGACGGCTGCTGAGCTA CAGCATCGAGAACGGCTCGGTGCGCGGCGGCACCGAGATCAAGGCGGAGCAGGTGCCGTACCCCACCAAGGTGCAGCTGA CCTCCAAGGGGGAGATCCTGGTCATCGACGGGAAACTCCGCCGCATCGCCCACTTCTCGCCCGAGGGGAGCTTTGCCGGC TACCTGGATCTGAAGGGGGTTCCGGCGCCTGCCACCATCGCCCCCCGCGGCATCCGCGTGGACGACAAGGACAATATCCA TATCCTGGATATCTTCGGGGCGCGGGTCATCGTCACCGATGCGGCCGGCACCTTCCAGTCGCAGATGCCGTTCCCCGAGG GGTACCGCTTCATCTCCGACCTGGCGGTCAGCGCCAGCGGGACCACGCTTCTCCTTGACAGCGTGGCGTCCAGGGTCTAT GCGGCCGCCCGCGGCGAAACCGCCTTCAAGCCCCTGACCGACGGGATGAAGGAGTATCTCCAGTTCCCCACCAGCATTGC CACCGACAAGCAGGGGAAGATCTTCATCCTCGACCAGACCGGCAATGCCGTCGTCACCCTCGGCCAGGACGGCTCCTTCC AGGGCCGTCAGCTCAACATCGGCTGGAAGAACTCGTTCCTCCACTATCCGTCGCAGCTCTGCATCAGCGAGGAGAACGAC ATCGACGTGGTTATCGCCGATCGGAACAATAACCGCATCCAGGTGTTCAGAGTGGTAAGGTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NHL Repeat Containing Protein; NHL Repeat Domain-Containing Protein; PKD Domain Containing Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
NA
Sequences:
>Translated_260_residues MKAPEGIACGKRQLVVSDTGGGRLLSYSIENGSVRGGTEIKAEQVPYPTKVQLTSKGEILVIDGKLRRIAHFSPEGSFAG YLDLKGVPAPATIAPRGIRVDDKDNIHILDIFGARVIVTDAAGTFQSQMPFPEGYRFISDLAVSASGTTLLLDSVASRVY AAARGETAFKPLTDGMKEYLQFPTSIATDKQGKIFILDQTGNAVVTLGQDGSFQGRQLNIGWKNSFLHYPSQLCISEEND IDVVIADRNNNRIQVFRVVR >Mature_260_residues MKAPEGIACGKRQLVVSDTGGGRLLSYSIENGSVRGGTEIKAEQVPYPTKVQLTSKGEILVIDGKLRRIAHFSPEGSFAG YLDLKGVPAPATIAPRGIRVDDKDNIHILDIFGARVIVTDAAGTFQSQMPFPEGYRFISDLAVSASGTTLLLDSVASRVY AAARGETAFKPLTDGMKEYLQFPTSIATDKQGKIFILDQTGNAVVTLGQDGSFQGRQLNIGWKNSFLHYPSQLCISEEND IDVVIADRNNNRIQVFRVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28206; Mature: 28206
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPEGIACGKRQLVVSDTGGGRLLSYSIENGSVRGGTEIKAEQVPYPTKVQLTSKGEIL CCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEE VIDGKLRRIAHFSPEGSFAGYLDLKGVPAPATIAPRGIRVDDKDNIHILDIFGARVIVTD EECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEEE AAGTFQSQMPFPEGYRFISDLAVSASGTTLLLDSVASRVYAAARGETAFKPLTDGMKEYL CCCCHHHCCCCCHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QFPTSIATDKQGKIFILDQTGNAVVTLGQDGSFQGRQLNIGWKNSFLHYPSQLCISEEND HCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEECCCEEEECCCCC IDVVIADRNNNRIQVFRVVR EEEEEEECCCCEEEEEEEEC >Mature Secondary Structure MKAPEGIACGKRQLVVSDTGGGRLLSYSIENGSVRGGTEIKAEQVPYPTKVQLTSKGEIL CCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEE VIDGKLRRIAHFSPEGSFAGYLDLKGVPAPATIAPRGIRVDDKDNIHILDIFGARVIVTD EECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEEE AAGTFQSQMPFPEGYRFISDLAVSASGTTLLLDSVASRVYAAARGETAFKPLTDGMKEYL CCCCHHHCCCCCHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QFPTSIATDKQGKIFILDQTGNAVVTLGQDGSFQGRQLNIGWKNSFLHYPSQLCISEEND HCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEECCCEEEECCCCC IDVVIADRNNNRIQVFRVVR EEEEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA