Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997470

Identifier: 39997470

GI number: 39997470

Start: 2601774

End: 2602388

Strand: Reverse

Name: 39997470

Synonym: GSU2374

Alternate gene names: NA

Gene position: 2602388-2601774 (Counterclockwise)

Preceding gene: 308513320

Following gene: 39997469

Centisome position: 68.23

GC content: 64.55

Gene sequence:

>615_bases
ATGCTTTTCAGCGTCTCCTGCAACCAGAGCGGACTTCGCAAGGAAGCCGGTCCGACGGCACAGTTCGACGCCGCGACCGA
TCTGGAGGTCCGCAGGCTCATGCAGCAGGGCGTCGAGTACGATGAACGACAGCGCCAGGCCCGAGCCATCGCCGTCGTCT
TCGCCAAGAGGACGACCCCTGAGCGCGCCCACAAGCTCGCAGCCCTCTGCTACCTGAAAACCCTCGGCACCGACCTCATG
CCGCTCGACCTGGCGGAAATAGCCCTCTCGGAAACCGGTTCCCTCGGATTCAATGCCAAGGCAGTCTCGCCCAAAGGGGC
GCTCGGCGTGTGGCAGTTGATGCCGTACCGCGCCGCCAGCCACGGTTACCGGCCCGAGGAGATGCAGGACGACGAGAAGT
GCGCCGAAGCCGCCGTGCGGGAGCTCTACAGCAAGCTCGACATGGCAAACGGCGACCTTGTCCGTGCCAAGAAACTTTAC
TGTGGCGTCGGCCCCGAAGCCGATGCCTACGAGATCAAGCGGCGCCGCTACCGGAGAGAGATCCTCCGTGAACTGGAGCC
GTCGCTTCCGGTGCGGGCCCAGGAGCTCCGCATCGAAGTGGAGCAGGCTTCGTAA

Upstream 100 bases:

>100_bases
TCCCATTGATCACCGTCCGTACTTCGGACCGTCCGGCAAAGCTGCGTACCCCGACCAAAAAACCACTATGAAAAAGATGA
TACTAGTATTGGCAGGAACG

Downstream 100 bases:

>100_bases
CCAGGAATCATTCTCCCGTGAAACAGGTATTATTCGCCGCATTCATACTGCTCTTTCTTTCGGGCTGCTCTCTGTTCCTC
TCCGAACCACGGGTCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTPERAHKLAALCYLKTLGTDLM
PLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAASHGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLY
CGVGPEADAYEIKRRRYRREILRELEPSLPVRAQELRIEVEQAS

Sequences:

>Translated_204_residues
MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTPERAHKLAALCYLKTLGTDLM
PLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAASHGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLY
CGVGPEADAYEIKRRRYRREILRELEPSLPVRAQELRIEVEQAS
>Mature_204_residues
MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTPERAHKLAALCYLKTLGTDLM
PLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAASHGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLY
CGVGPEADAYEIKRRRYRREILRELEPSLPVRAQELRIEVEQAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22877; Mature: 22877

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTP
CEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
ERAHKLAALCYLKTLGTDLMPLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAAS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHC
HGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLYCGVGPEADAYEIKRRRYRRE
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILRELEPSLPVRAQELRIEVEQAS
HHHHCCCCCCCCHHHHEEEEECCC
>Mature Secondary Structure
MLFSVSCNQSGLRKEAGPTAQFDAATDLEVRRLMQQGVEYDERQRQARAIAVVFAKRTTP
CEEECCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
ERAHKLAALCYLKTLGTDLMPLDLAEIALSETGSLGFNAKAVSPKGALGVWQLMPYRAAS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHC
HGYRPEEMQDDEKCAEAAVRELYSKLDMANGDLVRAKKLYCGVGPEADAYEIKRRRYRRE
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILRELEPSLPVRAQELRIEVEQAS
HHHHCCCCCCCCHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA