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The map label for this gene is xanB [H]

Identifier: 39997460

GI number: 39997460

Start: 2591302

End: 2591688

Strand: Reverse

Name: xanB [H]

Synonym: GSU2364

Alternate gene names: 39997460

Gene position: 2591688-2591302 (Counterclockwise)

Preceding gene: 39997461

Following gene: 39997458

Centisome position: 67.95

GC content: 58.4

Gene sequence:

>387_bases
ATGGAACTGGAGCGCGGCGAACGTCCTTGGGGCACATACACCGTTCTCGAGGAGAACAAGAACTACAAGATCAAGCGGAT
CGAGGTGAAGCCGGGGCAGCGGCTGTCGCTGCAGATGCACCATCACCGGAGCGAGCACTGGATCGTGGTTTCCGGAACGG
CCCGGGTTACCTGCGGCGACGATGAATACACGGTGAACGTGAACGAATCCACCTTTATCCCCATCGGTCGCAATCACCGG
TTGGAAAACCCGGGCAAGATACCCCTCGTCATCATCGAGGTGCAGAGTGGGGAATACCTGGGGGAGGACGACATCATTCG
TTTCGATGACGATTACCATCGCTGCGAAGCTGCTGCAGCGACCTGTGCCGAAGAGGAAGGGGCGTGA

Upstream 100 bases:

>100_bases
CCGGGACACGGGGCTCGAACTGGAAGGCTGGCGCGAGGCACTTGCCACCTATTTGGAAAAGCGGCGCGAAGCCGGATTGT
CCTGACGGAGGAACACGACG

Downstream 100 bases:

>100_bases
GCCCTTCCTTCATCACCACACTTCCCGACACGTTCTCCGGCAGGCCGCGGCGTCCCGTTTCCGCGTCGCGCCATGCCGGC
AGCCACAATGCCTCACCATT

Product: mannose-6-phosphate isomerase

Products: NA

Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MELERGERPWGTYTVLEENKNYKIKRIEVKPGQRLSLQMHHHRSEHWIVVSGTARVTCGDDEYTVNVNESTFIPIGRNHR
LENPGKIPLVIIEVQSGEYLGEDDIIRFDDDYHRCEAAAATCAEEEGA

Sequences:

>Translated_128_residues
MELERGERPWGTYTVLEENKNYKIKRIEVKPGQRLSLQMHHHRSEHWIVVSGTARVTCGDDEYTVNVNESTFIPIGRNHR
LENPGKIPLVIIEVQSGEYLGEDDIIRFDDDYHRCEAAAATCAEEEGA
>Mature_128_residues
MELERGERPWGTYTVLEENKNYKIKRIEVKPGQRLSLQMHHHRSEHWIVVSGTARVTCGDDEYTVNVNESTFIPIGRNHR
LENPGKIPLVIIEVQSGEYLGEDDIIRFDDDYHRCEAAAATCAEEEGA

Specific function: Involved in xanthan production [H]

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788362, Length=107, Percent_Identity=58.8785046728972, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR006375
- InterPro:   IPR001538
- InterPro:   IPR005835
- InterPro:   IPR014710 [H]

Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]

EC number: =5.3.1.8; =2.7.7.13 [H]

Molecular weight: Translated: 14681; Mature: 14681

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELERGERPWGTYTVLEENKNYKIKRIEVKPGQRLSLQMHHHRSEHWIVVSGTARVTCGD
CCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCEEEEECC
DEYTVNVNESTFIPIGRNHRLENPGKIPLVIIEVQSGEYLGEDDIIRFDDDYHRCEAAAA
CCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCEECCCCEEEECCCHHHHHHHHH
TCAEEEGA
HCCCCCCC
>Mature Secondary Structure
MELERGERPWGTYTVLEENKNYKIKRIEVKPGQRLSLQMHHHRSEHWIVVSGTARVTCGD
CCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCCEEEEECCEEEEECC
DEYTVNVNESTFIPIGRNHRLENPGKIPLVIIEVQSGEYLGEDDIIRFDDDYHRCEAAAA
CCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCEECCCCEEEECCCHHHHHHHHH
TCAEEEGA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370280; 11589581 [H]