Click here to switch to the map view.

The map label for this gene is yusO [H]

Identifier: 39997458

GI number: 39997458

Start: 2588553

End: 2589074

Strand: Reverse

Name: yusO [H]

Synonym: GSU2362

Alternate gene names: 39997458

Gene position: 2589074-2588553 (Counterclockwise)

Preceding gene: 39997460

Following gene: 39997451

Centisome position: 67.88

GC content: 62.07

Gene sequence:

>522_bases
ATGAAAACTACAGAAGAACTTATCGCCGATGTGACCGATAACCTGCGCCGGGTTTTTCAGGTTGTGAACGAACACTCGAA
ACGGGCCATGCGTGAGACGGGGCTCACCGGGCCCCAGCTCTGGACCATCAAGGTCGTTGCCGGCCACGGCCCCATTCGGG
TTTCCGATCTCGCCCGCAGGCTCTATCTCCACAATGCCACGGTAGTGGGGATCATCGATCGGCTGGAGGCTCTGGGGCTC
GTGCAGCGGACCCGGTCCCGGGAGGATCGCCGGGTGGTGATGGTCGACCTGACGGAAGACGGGAAAAACCTGGTGGCGCA
AGCTCCCGAGGTGGCCCAGGGACTCCTTGTGTCGGGGCTGGAAAACATTCCCCGGGAGAAGCTCGAAACCATCTTCGAAG
GATTTCAGCTCATGGTCAGCATCCTCGGGGCGCAGAACCTTCCCCCCCAGCTCATTTTCTCGTCGGAGGTGAACCGGGCG
CGGGCAGGGGGCGCCCGGAAGGGGCGAAGGAATACGGAGTGA

Upstream 100 bases:

>100_bases
GTTTTCCCCGTCGCACTGGTCGATTTTCTTGCCTTGGTGATAATCCGGCGCTAGGATGGGGGCGAGAAGGGGGCGTTACG
ATCCTGAACCGGAGCTGATA

Downstream 100 bases:

>100_bases
AACGGGAGTTTCCGCTAAAAAGGAGCCATGATCGGCTCCTTTTTTTATGGCGGAAACGGTTACCGGAACTCCCGCAGCAC
CGTCTCGACCCCGCGCAGGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKTTEELIADVTDNLRRVFQVVNEHSKRAMRETGLTGPQLWTIKVVAGHGPIRVSDLARRLYLHNATVVGIIDRLEALGL
VQRTRSREDRRVVMVDLTEDGKNLVAQAPEVAQGLLVSGLENIPREKLETIFEGFQLMVSILGAQNLPPQLIFSSEVNRA
RAGGARKGRRNTE

Sequences:

>Translated_173_residues
MKTTEELIADVTDNLRRVFQVVNEHSKRAMRETGLTGPQLWTIKVVAGHGPIRVSDLARRLYLHNATVVGIIDRLEALGL
VQRTRSREDRRVVMVDLTEDGKNLVAQAPEVAQGLLVSGLENIPREKLETIFEGFQLMVSILGAQNLPPQLIFSSEVNRA
RAGGARKGRRNTE
>Mature_173_residues
MKTTEELIADVTDNLRRVFQVVNEHSKRAMRETGLTGPQLWTIKVVAGHGPIRVSDLARRLYLHNATVVGIIDRLEALGL
VQRTRSREDRRVVMVDLTEDGKNLVAQAPEVAQGLLVSGLENIPREKLETIFEGFQLMVSILGAQNLPPQLIFSSEVNRA
RAGGARKGRRNTE

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19274; Mature: 19274

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTEELIADVTDNLRRVFQVVNEHSKRAMRETGLTGPQLWTIKVVAGHGPIRVSDLARR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEHHHHHHH
LYLHNATVVGIIDRLEALGLVQRTRSREDRRVVMVDLTEDGKNLVAQAPEVAQGLLVSGL
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHH
ENIPREKLETIFEGFQLMVSILGAQNLPPQLIFSSEVNRARAGGARKGRRNTE
HHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKTTEELIADVTDNLRRVFQVVNEHSKRAMRETGLTGPQLWTIKVVAGHGPIRVSDLARR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEHHHHHHH
LYLHNATVVGIIDRLEALGLVQRTRSREDRRVVMVDLTEDGKNLVAQAPEVAQGLLVSGL
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHH
ENIPREKLETIFEGFQLMVSILGAQNLPPQLIFSSEVNRARAGGARKGRRNTE
HHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]