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The map label for this gene is yfbS [C]

Identifier: 39997415

GI number: 39997415

Start: 2536490

End: 2538256

Strand: Reverse

Name: yfbS [C]

Synonym: GSU2317

Alternate gene names: 39997415

Gene position: 2538256-2536490 (Counterclockwise)

Preceding gene: 39997416

Following gene: 39997414

Centisome position: 66.55

GC content: 61.29

Gene sequence:

>1767_bases
GTGACCATTGAGATTCTGCTCGTGCTGGGCCTGGTCCTCTCTGCGGTAATCCTCTTTGCCACGGAGCGGATTCCGGTTGA
CATCGTCGCCCTCATTCTCATGGCAACGCTCCTTCTTTCCGGTATCATTGCCCCGGAAGAAGCCATCGGAGGTTTCAGCA
ACCCGGCCACAGTCACCGTTGGGGCAATGTTCATACTTTCGGCGGGGCTTTTCAGGACCGGCGCGGTGAACCTGCTGGGA
ATCACCCTGGCCCGGCTGGGAGCGTTGAGTTTCTGGCTGGTCCTGGTAGTTATGATGCTGGCGGTGGGGGTACTCTCCGC
CTTTATCAACAACACGGCTGCAGTGGCCATCTTTCTTCCCATTGCCCTGGGAGTGGCTCGGGATACGGGGGTATCGGCCG
GCAGGCTCCTCATGCCCCTCTCCTTTGCCTCCATGTTCGGCGGGGTTTGCACCCTCATCGGTACCTCCACCAATATTCTC
GTATCCTCCATTGCCGGCCGGCATGGCCTCGAACCTTTCGGCATGTTCGAGATGAGCGGTCTTGGTCTCATTTTTTTCGC
AGCGGGGAGTGTCTACATGCTGCTGGTGGGCGTGAGGCTCATTCCCGAGCGCAAGGGGGAGGAGGACCTGCGAAGGCTCT
TCGGCATCAGCGATTACCTGACCGAGATCGTGCTGGAGCCGGAGGCCCGCTCCGTGGGATCGGTGCTGGCCGATTCGCCG
CTGCTGCAAGATATTTCGATCCGGAGCGTGGAGGTATTCAGGGACGGGACCCTCCTCGATGAGCCCGGCGACCGGATCGT
GCTCCAGGCCGGCGATCATCTGAAGGTCCGCTGCGATCTGGAGAATTTCAGGAAACTCAAGGAGCGGCGCGGCATCGCCC
TGCGACAGGATTCGGGCCGTGCGCCGGGAGAGGAGGCGGTCCTGGTGGAGGCGGTGGTGGCACCGGGGTCCACCCTGGAC
GGCCGAAGTCTCAAACAGGCACGGTTCCGTTCCCGGTACGGCCTTACGGCGCTTGCGGTCCGCCACAGGGGGCGGCTCAT
GAGGGAAGACCTGGAAATGATGCAGCTGCGGGCGGGCGACGTTCTTCTCTTCGAGGTGGAGCAGCACCACCTGGACCATC
TCCGGGAGGACAAGACCTTTGTTCTGGTCTCCCAGGTTGAGCTCCCCGTCTTCCGCAAAAGCAGGATGGTCACTGCTGTT
GCCATCGTGGCTGCAGTGGTGGCTGCCGCGGCAACGGGGCTGGTTCCCATCGTGGCCGGAGCCATCGTTGGTTGCATCCT
GATGGTTCTGACCCGTTGTCTGACCCGCGAGGAGGCCTACAGCGCCATCAACTGGCAGGTGATCTTTCTCCTTGCCGGAG
TTCTCACCCTGGGGACTGCCCTGGAAAAGAGCGGCGCAGCACGTCTCCTGGCGGGCTACCTGGTTGAGACGGTGGGGACA
TGGGGGCCCGTGGCCCTGGTCTCGGCCTTCTACCTCGCGACGTCGCTGCTGACCGAGATGATGTCCAATAATGCGACGGC
AGCCATGCTGGCTCCCATCGCCATCGCTTCAGCCGAGGCATACGGGGTTGATTCCCGCCCCTTCCTCATGGCCATCACCT
TTGCCGCTTCAGCCAGTTTCATGACCCCGGTCGGCTACCAGACCAACACCCTGATCTATGGGCCAGGCCAGTTCAGGTAT
GCTGATTTTCTGCGAGTGGGAACGCCACTCAATATTCTTTTTTGGGTTCTGGCGACGATATTCATTCCGCGCTTCTGGCC
TTTTTGA

Upstream 100 bases:

>100_bases
GCAATGAATGGTTCGTATCCCACTATCTTCTCAGGAAGAACTCAGCCGGTGTCTTGTGCGGGAACCGACAAAAGGCCCTG
TCCTTTTCTGGAGTGTGTAA

Downstream 100 bases:

>100_bases
CGGGGAGAGCTGCCCATGGAAACCTTGATGGAACTGATTGGAACAGTCAGGCAATACCTTGAAATTCCCATTCTGAAGCT
CGGCGGCGCCCCCGTGACCC

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTIEILLVLGLVLSAVILFATERIPVDIVALILMATLLLSGIIAPEEAIGGFSNPATVTVGAMFILSAGLFRTGAVNLLG
ITLARLGALSFWLVLVVMMLAVGVLSAFINNTAAVAIFLPIALGVARDTGVSAGRLLMPLSFASMFGGVCTLIGTSTNIL
VSSIAGRHGLEPFGMFEMSGLGLIFFAAGSVYMLLVGVRLIPERKGEEDLRRLFGISDYLTEIVLEPEARSVGSVLADSP
LLQDISIRSVEVFRDGTLLDEPGDRIVLQAGDHLKVRCDLENFRKLKERRGIALRQDSGRAPGEEAVLVEAVVAPGSTLD
GRSLKQARFRSRYGLTALAVRHRGRLMREDLEMMQLRAGDVLLFEVEQHHLDHLREDKTFVLVSQVELPVFRKSRMVTAV
AIVAAVVAAAATGLVPIVAGAIVGCILMVLTRCLTREEAYSAINWQVIFLLAGVLTLGTALEKSGAARLLAGYLVETVGT
WGPVALVSAFYLATSLLTEMMSNNATAAMLAPIAIASAEAYGVDSRPFLMAITFAASASFMTPVGYQTNTLIYGPGQFRY
ADFLRVGTPLNILFWVLATIFIPRFWPF

Sequences:

>Translated_588_residues
MTIEILLVLGLVLSAVILFATERIPVDIVALILMATLLLSGIIAPEEAIGGFSNPATVTVGAMFILSAGLFRTGAVNLLG
ITLARLGALSFWLVLVVMMLAVGVLSAFINNTAAVAIFLPIALGVARDTGVSAGRLLMPLSFASMFGGVCTLIGTSTNIL
VSSIAGRHGLEPFGMFEMSGLGLIFFAAGSVYMLLVGVRLIPERKGEEDLRRLFGISDYLTEIVLEPEARSVGSVLADSP
LLQDISIRSVEVFRDGTLLDEPGDRIVLQAGDHLKVRCDLENFRKLKERRGIALRQDSGRAPGEEAVLVEAVVAPGSTLD
GRSLKQARFRSRYGLTALAVRHRGRLMREDLEMMQLRAGDVLLFEVEQHHLDHLREDKTFVLVSQVELPVFRKSRMVTAV
AIVAAVVAAAATGLVPIVAGAIVGCILMVLTRCLTREEAYSAINWQVIFLLAGVLTLGTALEKSGAARLLAGYLVETVGT
WGPVALVSAFYLATSLLTEMMSNNATAAMLAPIAIASAEAYGVDSRPFLMAITFAASASFMTPVGYQTNTLIYGPGQFRY
ADFLRVGTPLNILFWVLATIFIPRFWPF
>Mature_587_residues
TIEILLVLGLVLSAVILFATERIPVDIVALILMATLLLSGIIAPEEAIGGFSNPATVTVGAMFILSAGLFRTGAVNLLGI
TLARLGALSFWLVLVVMMLAVGVLSAFINNTAAVAIFLPIALGVARDTGVSAGRLLMPLSFASMFGGVCTLIGTSTNILV
SSIAGRHGLEPFGMFEMSGLGLIFFAAGSVYMLLVGVRLIPERKGEEDLRRLFGISDYLTEIVLEPEARSVGSVLADSPL
LQDISIRSVEVFRDGTLLDEPGDRIVLQAGDHLKVRCDLENFRKLKERRGIALRQDSGRAPGEEAVLVEAVVAPGSTLDG
RSLKQARFRSRYGLTALAVRHRGRLMREDLEMMQLRAGDVLLFEVEQHHLDHLREDKTFVLVSQVELPVFRKSRMVTAVA
IVAAVVAAAATGLVPIVAGAIVGCILMVLTRCLTREEAYSAINWQVIFLLAGVLTLGTALEKSGAARLLAGYLVETVGTW
GPVALVSAFYLATSLLTEMMSNNATAAMLAPIAIASAEAYGVDSRPFLMAITFAASASFMTPVGYQTNTLIYGPGQFRYA
DFLRVGTPLNILFWVLATIFIPRFWPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=622, Percent_Identity=31.6720257234727, Blast_Score=280, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 63134; Mature: 63003

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEILLVLGLVLSAVILFATERIPVDIVALILMATLLLSGIIAPEEAIGGFSNPATVTV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHH
GAMFILSAGLFRTGAVNLLGITLARLGALSFWLVLVVMMLAVGVLSAFINNTAAVAIFLP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IALGVARDTGVSAGRLLMPLSFASMFGGVCTLIGTSTNILVSSIAGRHGLEPFGMFEMSG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCC
LGLIFFAAGSVYMLLVGVRLIPERKGEEDLRRLFGISDYLTEIVLEPEARSVGSVLADSP
CCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCC
LLQDISIRSVEVFRDGTLLDEPGDRIVLQAGDHLKVRCDLENFRKLKERRGIALRQDSGR
CHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHCCCEEECCCCC
APGEEAVLVEAVVAPGSTLDGRSLKQARFRSRYGLTALAVRHRGRLMREDLEMMQLRAGD
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VLLFEVEQHHLDHLREDKTFVLVSQVELPVFRKSRMVTAVAIVAAVVAAAATGLVPIVAG
EEEEEEHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVGCILMVLTRCLTREEAYSAINWQVIFLLAGVLTLGTALEKSGAARLLAGYLVETVGT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
WGPVALVSAFYLATSLLTEMMSNNATAAMLAPIAIASAEAYGVDSRPFLMAITFAASASF
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCEEEEEHHHCCCC
MTPVGYQTNTLIYGPGQFRYADFLRVGTPLNILFWVLATIFIPRFWPF
CCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TIEILLVLGLVLSAVILFATERIPVDIVALILMATLLLSGIIAPEEAIGGFSNPATVTV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHH
GAMFILSAGLFRTGAVNLLGITLARLGALSFWLVLVVMMLAVGVLSAFINNTAAVAIFLP
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IALGVARDTGVSAGRLLMPLSFASMFGGVCTLIGTSTNILVSSIAGRHGLEPFGMFEMSG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCC
LGLIFFAAGSVYMLLVGVRLIPERKGEEDLRRLFGISDYLTEIVLEPEARSVGSVLADSP
CCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCC
LLQDISIRSVEVFRDGTLLDEPGDRIVLQAGDHLKVRCDLENFRKLKERRGIALRQDSGR
CHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHCCCEEECCCCC
APGEEAVLVEAVVAPGSTLDGRSLKQARFRSRYGLTALAVRHRGRLMREDLEMMQLRAGD
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VLLFEVEQHHLDHLREDKTFVLVSQVELPVFRKSRMVTAVAIVAAVVAAAATGLVPIVAG
EEEEEEHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVGCILMVLTRCLTREEAYSAINWQVIFLLAGVLTLGTALEKSGAARLLAGYLVETVGT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
WGPVALVSAFYLATSLLTEMMSNNATAAMLAPIAIASAEAYGVDSRPFLMAITFAASASF
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCEEEEEHHHCCCC
MTPVGYQTNTLIYGPGQFRYADFLRVGTPLNILFWVLATIFIPRFWPF
CCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]