Click here to switch to the map view.

The map label for this gene is 39997396

Identifier: 39997396

GI number: 39997396

Start: 2517182

End: 2518006

Strand: Reverse

Name: 39997396

Synonym: GSU2298

Alternate gene names: NA

Gene position: 2518006-2517182 (Counterclockwise)

Preceding gene: 39997411

Following gene: 39997395

Centisome position: 66.02

GC content: 57.82

Gene sequence:

>825_bases
GTGGAAGAGCTCCAGGCCCTCCAGGTCAGGCTGGAGCAGAAAATCCGGGAGATGGAGTGCAGCCCCACCGTTTCCAGCGA
CGAATTGCTGGCAAAAAACGTACGACACCTGCAGGACCTCTCAGCCAATACCCGCGCACAGCGCCAATCCATGGCAGACT
TCGAGAAATTCGTCACCTGGATGAGTTCAAGTCTCGCCGGCTACGAAAAGTACATCCAGGCCGGCTCCGTGGTTGCCGGC
TTTGCCCGGGTCCTGCCGATCCCCTACGCGGGGCAGGCCTCAGTCCTGACCAAATTTGTTTCCCAAGGGGTTCTCTCCCT
GAACGCCGCTTCCGGCTCCATTGCCTCGTACCTGAAGACTTCCGACAGGTACTTGGCCATGGTCGACGCTATAGACCCTG
TCCGCCCCGATGCCGTCAAGGTCTCAGCTGCTGCCCGCTATGCCGACGGCGAACTCCTGCGTGCCATGACCGATGTCCAG
GCCAAGTTGCGGACGTCGGCCGATGTTTCCGCATCCACCCTTTCGTTCCTGGAAACCCTTGATCACTACGCAGGAAATAC
TGATGAATACTGGGCAAAGACAAAGGCGTTCGTCACCCGCAACGACGCCTATAAAAACGATAAAAGTTACCTGGCTGCCA
GTATCGAAGGGCTCAGGAACCGTGCGGCAAGCTTCAATGGGCGGCTCAGGCTTTTCGAAGAATCAGCGAAAAAGGATCTC
CCCCTCATAAAGAACCTGGTTGCCTATGACGATCTCATCCGTGAGTTGGACAGGAAACGGGCGTCCGGGGATGGAGGTGG
CGCGGCGGCGCAGGCTGTGAAATAA

Upstream 100 bases:

>100_bases
ACTGCTCGGCCGCGGGGCCGAGGGGAATGCATCCGAGGCGGCGGTTGTGCCGCCGGCATCGCTCACGTGTGAGGAGTCGC
TTGAACGCCGGCAGAAGCTC

Downstream 100 bases:

>100_bases
TTTGTATAATTGACAATGCGAATATTTAAATGTAATGTAGCAAATTGATTGGTTCCAACGATAATAAGAACGGCCATGAC
CCATGGAGGGGGCTTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MEELQALQVRLEQKIREMECSPTVSSDELLAKNVRHLQDLSANTRAQRQSMADFEKFVTWMSSSLAGYEKYIQAGSVVAG
FARVLPIPYAGQASVLTKFVSQGVLSLNAASGSIASYLKTSDRYLAMVDAIDPVRPDAVKVSAAARYADGELLRAMTDVQ
AKLRTSADVSASTLSFLETLDHYAGNTDEYWAKTKAFVTRNDAYKNDKSYLAASIEGLRNRAASFNGRLRLFEESAKKDL
PLIKNLVAYDDLIRELDRKRASGDGGGAAAQAVK

Sequences:

>Translated_274_residues
MEELQALQVRLEQKIREMECSPTVSSDELLAKNVRHLQDLSANTRAQRQSMADFEKFVTWMSSSLAGYEKYIQAGSVVAG
FARVLPIPYAGQASVLTKFVSQGVLSLNAASGSIASYLKTSDRYLAMVDAIDPVRPDAVKVSAAARYADGELLRAMTDVQ
AKLRTSADVSASTLSFLETLDHYAGNTDEYWAKTKAFVTRNDAYKNDKSYLAASIEGLRNRAASFNGRLRLFEESAKKDL
PLIKNLVAYDDLIRELDRKRASGDGGGAAAQAVK
>Mature_274_residues
MEELQALQVRLEQKIREMECSPTVSSDELLAKNVRHLQDLSANTRAQRQSMADFEKFVTWMSSSLAGYEKYIQAGSVVAG
FARVLPIPYAGQASVLTKFVSQGVLSLNAASGSIASYLKTSDRYLAMVDAIDPVRPDAVKVSAAARYADGELLRAMTDVQ
AKLRTSADVSASTLSFLETLDHYAGNTDEYWAKTKAFVTRNDAYKNDKSYLAASIEGLRNRAASFNGRLRLFEESAKKDL
PLIKNLVAYDDLIRELDRKRASGDGGGAAAQAVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30006; Mature: 30006

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELQALQVRLEQKIREMECSPTVSSDELLAKNVRHLQDLSANTRAQRQSMADFEKFVTW
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
MSSSLAGYEKYIQAGSVVAGFARVLPIPYAGQASVLTKFVSQGVLSLNAASGSIASYLKT
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHEEECCCCHHHHHHHC
SDRYLAMVDAIDPVRPDAVKVSAAARYADGELLRAMTDVQAKLRTSADVSASTLSFLETL
CCHHEEEHHCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DHYAGNTDEYWAKTKAFVTRNDAYKNDKSYLAASIEGLRNRAASFNGRLRLFEESAKKDL
HHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCH
PLIKNLVAYDDLIRELDRKRASGDGGGAAAQAVK
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
>Mature Secondary Structure
MEELQALQVRLEQKIREMECSPTVSSDELLAKNVRHLQDLSANTRAQRQSMADFEKFVTW
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
MSSSLAGYEKYIQAGSVVAGFARVLPIPYAGQASVLTKFVSQGVLSLNAASGSIASYLKT
HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHEEECCCCHHHHHHHC
SDRYLAMVDAIDPVRPDAVKVSAAARYADGELLRAMTDVQAKLRTSADVSASTLSFLETL
CCHHEEEHHCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DHYAGNTDEYWAKTKAFVTRNDAYKNDKSYLAASIEGLRNRAASFNGRLRLFEESAKKDL
HHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCH
PLIKNLVAYDDLIRELDRKRASGDGGGAAAQAVK
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA