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The map label for this gene is yedQ [H]

Identifier: 39997411

GI number: 39997411

Start: 2531046

End: 2531951

Strand: Reverse

Name: yedQ [H]

Synonym: GSU2313

Alternate gene names: 39997411

Gene position: 2531951-2531046 (Counterclockwise)

Preceding gene: 39997412

Following gene: 39997396

Centisome position: 66.38

GC content: 60.71

Gene sequence:

>906_bases
ATGCGAATTCTCATCGCCGATGATGATGTAACCTCGCGCACTATGCTGACCGGACTGATGAAACGGTGGGGCTACGACGT
GGTGGAGGCGATTGATGGAGCGCAGGCCTGGGAAGAACTGCAAAAAAGCGATGCCCCCAAGCTGGCCGTACTGGATTGGG
TTATGCCCGTCATGGACGGGGTGGAGGTGATCCGGCAGGTCCGTGCCCGGTCAGCTGAACATCTGCCCTACATTCTCCTG
CTCACGGCCAAAAACGGTACTGACGACGTAATCCGCGGGCTCGATGCCGGCGCCGACGATTACGTGGGCAAACCGTTCAG
TCTCGGAGAACTGCGCGCCCGGATCCAGGTGGGCCGCCGCACCGTCGAGCTGCATTCGAGACTGCAGGAGACCCAGGAGG
CCCTGAATCACCAGGCCACCCACGATCCATTGACCGGCGTCATGAACCGGCGCGCGATTATTGACCACCTGGAAAAAGAG
CTGTCCCGGGTCAAGCGGGATGGGGGAAGTTTGAGCATCGGCATCCTGGATATCGATCACTTCAAGCGGGTAAACGACCG
TTACGGTCATCAGACCGGAGACGAGGTGCTGTGCGGCTGCGTCGGAGTGCTGGGGGGGCTGCTCAGGGACTATGACCTGC
TGGGTCGGCTGGGCGGAGAAGAATTCCTCGTGGTAGCTCCGGGCACGGGAGATGATTGCAATCATCTCTATGAGCGGCTC
CGGGCGGCCATAGCTTCGACAAAATTCACCTCCAGGGCTAAGCCGGTGTCAGTTACCGTAAGCATCGGTGTTGCCGCGTG
CGACGGCACCGCCGGTCTGGACGAACTGCTGGCTGCCGCCGATGATGCCTTGTATCGGGCTAAAAGGTCAGGACGGGACC
GCGTGGTTCAGGCGGGATCACCATGA

Upstream 100 bases:

>100_bases
GAGGCATGGGCGGTGTCGCCTGCTGCATGAACATGCTGGAAATCGAATTCGGCCGATTATGTGAAATCATGAGACAAGAC
TACGTCAAGGAGTGACGCCT

Downstream 100 bases:

>100_bases
TTGGTCGAGCCGGTGGGACGCGTAGCGGGCACGCTGCATGTCTCCGACTCTCTCTCCTTGCTGTGGAGTCCAGCCAGGAT
CATATCTTCCGTCGACATCT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRILIADDDVTSRTMLTGLMKRWGYDVVEAIDGAQAWEELQKSDAPKLAVLDWVMPVMDGVEVIRQVRARSAEHLPYILL
LTAKNGTDDVIRGLDAGADDYVGKPFSLGELRARIQVGRRTVELHSRLQETQEALNHQATHDPLTGVMNRRAIIDHLEKE
LSRVKRDGGSLSIGILDIDHFKRVNDRYGHQTGDEVLCGCVGVLGGLLRDYDLLGRLGGEEFLVVAPGTGDDCNHLYERL
RAAIASTKFTSRAKPVSVTVSIGVAACDGTAGLDELLAAADDALYRAKRSGRDRVVQAGSP

Sequences:

>Translated_301_residues
MRILIADDDVTSRTMLTGLMKRWGYDVVEAIDGAQAWEELQKSDAPKLAVLDWVMPVMDGVEVIRQVRARSAEHLPYILL
LTAKNGTDDVIRGLDAGADDYVGKPFSLGELRARIQVGRRTVELHSRLQETQEALNHQATHDPLTGVMNRRAIIDHLEKE
LSRVKRDGGSLSIGILDIDHFKRVNDRYGHQTGDEVLCGCVGVLGGLLRDYDLLGRLGGEEFLVVAPGTGDDCNHLYERL
RAAIASTKFTSRAKPVSVTVSIGVAACDGTAGLDELLAAADDALYRAKRSGRDRVVQAGSP
>Mature_301_residues
MRILIADDDVTSRTMLTGLMKRWGYDVVEAIDGAQAWEELQKSDAPKLAVLDWVMPVMDGVEVIRQVRARSAEHLPYILL
LTAKNGTDDVIRGLDAGADDYVGKPFSLGELRARIQVGRRTVELHSRLQETQEALNHQATHDPLTGVMNRRAIIDHLEKE
LSRVKRDGGSLSIGILDIDHFKRVNDRYGHQTGDEVLCGCVGVLGGLLRDYDLLGRLGGEEFLVVAPGTGDDCNHLYERL
RAAIASTKFTSRAKPVSVTVSIGVAACDGTAGLDELLAAADDALYRAKRSGRDRVVQAGSP

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87081881, Length=168, Percent_Identity=41.0714285714286, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI145693134, Length=166, Percent_Identity=34.9397590361446, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI87082007, Length=184, Percent_Identity=35.3260869565217, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786584, Length=179, Percent_Identity=33.5195530726257, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787802, Length=232, Percent_Identity=31.4655172413793, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787262, Length=193, Percent_Identity=34.7150259067358, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081977, Length=165, Percent_Identity=35.1515151515151, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788085, Length=178, Percent_Identity=33.7078651685393, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1787816, Length=161, Percent_Identity=32.9192546583851, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=36.3636363636364, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788381, Length=167, Percent_Identity=32.3353293413174, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87082012, Length=158, Percent_Identity=31.6455696202532, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790863, Length=119, Percent_Identity=36.9747899159664, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787541, Length=173, Percent_Identity=32.9479768786127, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789809, Length=115, Percent_Identity=37.3913043478261, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=34.1880341880342, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787056, Length=163, Percent_Identity=30.0613496932515, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786911, Length=124, Percent_Identity=38.7096774193548, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081974, Length=174, Percent_Identity=27.0114942528736, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790437, Length=171, Percent_Identity=28.0701754385965, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787375, Length=120, Percent_Identity=37.5, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790552, Length=119, Percent_Identity=38.655462184874, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788956, Length=185, Percent_Identity=30.8108108108108, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788550, Length=138, Percent_Identity=34.0579710144928, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1789402, Length=123, Percent_Identity=36.5853658536585, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI2367329, Length=115, Percent_Identity=35.6521739130435, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1786784, Length=132, Percent_Identity=32.5757575757576, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 32866; Mature: 32866

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIADDDVTSRTMLTGLMKRWGYDVVEAIDGAQAWEELQKSDAPKLAVLDWVMPVMDG
CEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VEVIRQVRARSAEHLPYILLLTAKNGTDDVIRGLDAGADDYVGKPFSLGELRARIQVGRR
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
TVELHSRLQETQEALNHQATHDPLTGVMNRRAIIDHLEKELSRVKRDGGSLSIGILDIDH
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHH
FKRVNDRYGHQTGDEVLCGCVGVLGGLLRDYDLLGRLGGEEFLVVAPGTGDDCNHLYERL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
RAAIASTKFTSRAKPVSVTVSIGVAACDGTAGLDELLAAADDALYRAKRSGRDRVVQAGS
HHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCC
P
C
>Mature Secondary Structure
MRILIADDDVTSRTMLTGLMKRWGYDVVEAIDGAQAWEELQKSDAPKLAVLDWVMPVMDG
CEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VEVIRQVRARSAEHLPYILLLTAKNGTDDVIRGLDAGADDYVGKPFSLGELRARIQVGRR
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
TVELHSRLQETQEALNHQATHDPLTGVMNRRAIIDHLEKELSRVKRDGGSLSIGILDIDH
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHH
FKRVNDRYGHQTGDEVLCGCVGVLGGLLRDYDLLGRLGGEEFLVVAPGTGDDCNHLYERL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
RAAIASTKFTSRAKPVSVTVSIGVAACDGTAGLDELLAAADDALYRAKRSGRDRVVQAGS
HHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA