| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997348
Identifier: 39997348
GI number: 39997348
Start: 2464946
End: 2466025
Strand: Reverse
Name: 39997348
Synonym: GSU2250
Alternate gene names: NA
Gene position: 2466025-2464946 (Counterclockwise)
Preceding gene: 39997349
Following gene: 39997347
Centisome position: 64.65
GC content: 54.07
Gene sequence:
>1080_bases ATGCGCGTGTTGTTTGTGGCACCCAACTACTATCCTCACATCGGCGGCGTGGAAAGACACGTCCGCGAGGTGTCGCTCGA ACTCCAGAAGGATGGCCATTCGATAACCATTCTCGTTCCCAAGCATGACAGCTCCTACGGGGACTTCGAACGGGAAGGAA ATATCGAGGTTGTCAGGCTGAACAAGCCACAGACCAAGCTGTTCACGGGATTAGAGCGGGTCTTGCAGGTTGCAGGGGTG TCTGGCAGGTTTCTCAAAGCCGATATCGTTAATTTTCACGACGTTGCGACCATGTGGCGTTATGGCCTCTGGATTTACCC GATTCTCAGGGTCCTTGGCAAGAAGGTCTATATAACCTTCCATGGATGGGAGGGACATTTTCCTCCCAAGGACAAGATCG TCGCAAGGCGGAAACTGGCAGCGCGTCTTGCGGATGGAACCATGTGCGTTGGGCACTTTATCGAAAAATGGTATGGTACA CGTGCCGATGTTGTAACCTATGGCGGTGTTCACAGGTCTTCCCTGCCCGAAGCTCATGAAAACAGCGTCGTATTTGTGGG ACGGCTTGCCAAGGATTCCGGCATCGACTCCTATCTCAGAGCCTGGGAGTGGATCGTACGCGACCATCCAGAACTTCGGC TGGTCATCTGCGGCGACGGAGCGATGAAGAAAGAGCTTGAAGACTTCGTCTGTCACACAGGACTTCGCAACGTGGAATTC CTCGGACTCGTGGAGAACCCCCTCCCTTACGTTACAGATGCAAAAGTCGTCTTCACCTCGGGGTATCTGGGCATCCTGGA GGCTTTTTCCCGAAAGAAGCCGGTCGTGGCCGTGTACGATAACGAACTCAAGAAAGACTATCTTGAAATGATGCCAGACA GCCGCCGGTTGATGTGGATTGCGCGCGATAGTAAAGAGGTGGCGCGGTGCGTCGACGAGGCCCTTCTGGACCGGGAAAAG ACTGAACGGGCATACCGCTACTCTCTGGAGAACTCCTGGACCAAGGTCAAGGAGGACTATTACAGACTTTGGAATGTTGA TGGCGAACATGGGGAGTCGCATGGCGGGAGAGGGCGATGA
Upstream 100 bases:
>100_bases GCGGCGGTTGGCAGGCTTGTCGCGATAGCCGATTCCATCCTAAAAAACTGATTGGGCTCAACTCTTTTGGGAACGTTATG TTCCGGGAAAAAGGCGAAGC
Downstream 100 bases:
>100_bases TCCTGGTCTGTGAACCAGTCTGTCACGGTTTCGAGCACTCGTCGTTCAATGCGGCGATGCTGCTTGTGATCAGCCATGCT TGTCCCGAGGAAGAAATCGT
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MRVLFVAPNYYPHIGGVERHVREVSLELQKDGHSITILVPKHDSSYGDFEREGNIEVVRLNKPQTKLFTGLERVLQVAGV SGRFLKADIVNFHDVATMWRYGLWIYPILRVLGKKVYITFHGWEGHFPPKDKIVARRKLAARLADGTMCVGHFIEKWYGT RADVVTYGGVHRSSLPEAHENSVVFVGRLAKDSGIDSYLRAWEWIVRDHPELRLVICGDGAMKKELEDFVCHTGLRNVEF LGLVENPLPYVTDAKVVFTSGYLGILEAFSRKKPVVAVYDNELKKDYLEMMPDSRRLMWIARDSKEVARCVDEALLDREK TERAYRYSLENSWTKVKEDYYRLWNVDGEHGESHGGRGR
Sequences:
>Translated_359_residues MRVLFVAPNYYPHIGGVERHVREVSLELQKDGHSITILVPKHDSSYGDFEREGNIEVVRLNKPQTKLFTGLERVLQVAGV SGRFLKADIVNFHDVATMWRYGLWIYPILRVLGKKVYITFHGWEGHFPPKDKIVARRKLAARLADGTMCVGHFIEKWYGT RADVVTYGGVHRSSLPEAHENSVVFVGRLAKDSGIDSYLRAWEWIVRDHPELRLVICGDGAMKKELEDFVCHTGLRNVEF LGLVENPLPYVTDAKVVFTSGYLGILEAFSRKKPVVAVYDNELKKDYLEMMPDSRRLMWIARDSKEVARCVDEALLDREK TERAYRYSLENSWTKVKEDYYRLWNVDGEHGESHGGRGR >Mature_359_residues MRVLFVAPNYYPHIGGVERHVREVSLELQKDGHSITILVPKHDSSYGDFEREGNIEVVRLNKPQTKLFTGLERVLQVAGV SGRFLKADIVNFHDVATMWRYGLWIYPILRVLGKKVYITFHGWEGHFPPKDKIVARRKLAARLADGTMCVGHFIEKWYGT RADVVTYGGVHRSSLPEAHENSVVFVGRLAKDSGIDSYLRAWEWIVRDHPELRLVICGDGAMKKELEDFVCHTGLRNVEF LGLVENPLPYVTDAKVVFTSGYLGILEAFSRKKPVVAVYDNELKKDYLEMMPDSRRLMWIARDSKEVARCVDEALLDREK TERAYRYSLENSWTKVKEDYYRLWNVDGEHGESHGGRGR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41328; Mature: 41328
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLFVAPNYYPHIGGVERHVREVSLELQKDGHSITILVPKHDSSYGDFEREGNIEVVRL CEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEE NKPQTKLFTGLERVLQVAGVSGRFLKADIVNFHDVATMWRYGLWIYPILRVLGKKVYITF CCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE HGWEGHFPPKDKIVARRKLAARLADGTMCVGHFIEKWYGTRADVVTYGGVHRSSLPEAHE ECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC NSVVFVGRLAKDSGIDSYLRAWEWIVRDHPELRLVICGDGAMKKELEDFVCHTGLRNVEF CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE LGLVENPLPYVTDAKVVFTSGYLGILEAFSRKKPVVAVYDNELKKDYLEMMPDSRRLMWI EEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEE ARDSKEVARCVDEALLDREKTERAYRYSLENSWTKVKEDYYRLWNVDGEHGESHGGRGR ECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRVLFVAPNYYPHIGGVERHVREVSLELQKDGHSITILVPKHDSSYGDFEREGNIEVVRL CEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEE NKPQTKLFTGLERVLQVAGVSGRFLKADIVNFHDVATMWRYGLWIYPILRVLGKKVYITF CCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE HGWEGHFPPKDKIVARRKLAARLADGTMCVGHFIEKWYGTRADVVTYGGVHRSSLPEAHE ECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC NSVVFVGRLAKDSGIDSYLRAWEWIVRDHPELRLVICGDGAMKKELEDFVCHTGLRNVEF CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE LGLVENPLPYVTDAKVVFTSGYLGILEAFSRKKPVVAVYDNELKKDYLEMMPDSRRLMWI EEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEE ARDSKEVARCVDEALLDREKTERAYRYSLENSWTKVKEDYYRLWNVDGEHGESHGGRGR ECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA