| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997349
Identifier: 39997349
GI number: 39997349
Start: 2466075
End: 2467076
Strand: Reverse
Name: 39997349
Synonym: GSU2251
Alternate gene names: NA
Gene position: 2467076-2466075 (Counterclockwise)
Preceding gene: 39997350
Following gene: 39997348
Centisome position: 64.68
GC content: 57.88
Gene sequence:
>1002_bases TTGAATCTGCTGCTTTTTCCTCTTTATGCACTCGAAAAGCTGTTGATCGATCTCGATAGCCAATGGTGGTGGTTCCCCCT CGCCGCTTTCGCGGGAGGGCGTCTGTGCAAGGAGCACAAACCCGAGCTCATCTACTCGACGGGCGGTGCGGCAAGTGCCC ACATGGCCGCTTTCTTTGTTTCACGTTTCACAGGGCTCCCATGGATTGCCGAGTTTCAGGATCCCCTCGTTTTTCGCGAC TGGAAGAGAAGCAAACGCGCTTACGCCGTCTACGCTTTTGTCGAGCGAGTGGTATGTGCACGAGCATCCGCGGTGATTTA TCTCACCGAAGCCGCCCGTGAACACGCATCCAAAAGGACTGAGCTTGGTGACAAGGGATATGTGATTTACGCCGGCGCAG AACCGGCCACGCCGGAATATGACGACTCTCGCCCTTGCTGCCGGGACACCTGGCGCATCGCCCATTTCGGCTCGCTTGGC GGGTCTCGCAATCTCAGCGTGTTCCTCCGGGGACTGGAGATGTTCTTGAGTAATCGCCCGGAACTTGCCGAAATCGTTCG CTTCGACCAGTACGGGACGAGCGACCGGGTATCGTGCGAGCTTGTCGACAATTTTCCTGTTTCCGGGGTTGTGAGGAACC GGGGTCGGGTTTCCCGTAATGAGGCCCTGTCGGCCATGGCGGACTGCGATGTGCTGTTGCTCATTCAGAATACCGAGGAC ATCTCGGCGGAAACGATTCCCTCGAAGACCTATGAGTACTTCCATATGGCCAAGCCGATACTGGGGCTGCTCCACAGGAA TCCCGAACTCTCGCGGATGCTTGCGGAGCTGGGGCACAGGCCGCTGGCTGCGGATGACCCCGTCGCGGTCAAGCAGGGGC TCATGGAGATGATCTACGAGTGGCAGGAGGGAGGAAGGCGCGAGATGGCCATATCTCCTTACACGGTGAAGGCGGCGGTT GGCAGGCTTGTCGCGATAGCCGATTCCATCCTAAAAAACTGA
Upstream 100 bases:
>100_bases CGCGCATGTACGGGTTCCGTCCGTGGCCCCCTCCGGGATTCGCTATGAGTTGCGGCACCTGAGGAGGAAGAGTCGACTGG TTGCGCTGCTGTATCCTCTC
Downstream 100 bases:
>100_bases TTGGGCTCAACTCTTTTGGGAACGTTATGTTCCGGGAAAAAGGCGAAGCATGCGCGTGTTGTTTGTGGCACCCAACTACT ATCCTCACATCGGCGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNLLLFPLYALEKLLIDLDSQWWWFPLAAFAGGRLCKEHKPELIYSTGGAASAHMAAFFVSRFTGLPWIAEFQDPLVFRD WKRSKRAYAVYAFVERVVCARASAVIYLTEAAREHASKRTELGDKGYVIYAGAEPATPEYDDSRPCCRDTWRIAHFGSLG GSRNLSVFLRGLEMFLSNRPELAEIVRFDQYGTSDRVSCELVDNFPVSGVVRNRGRVSRNEALSAMADCDVLLLIQNTED ISAETIPSKTYEYFHMAKPILGLLHRNPELSRMLAELGHRPLAADDPVAVKQGLMEMIYEWQEGGRREMAISPYTVKAAV GRLVAIADSILKN
Sequences:
>Translated_333_residues MNLLLFPLYALEKLLIDLDSQWWWFPLAAFAGGRLCKEHKPELIYSTGGAASAHMAAFFVSRFTGLPWIAEFQDPLVFRD WKRSKRAYAVYAFVERVVCARASAVIYLTEAAREHASKRTELGDKGYVIYAGAEPATPEYDDSRPCCRDTWRIAHFGSLG GSRNLSVFLRGLEMFLSNRPELAEIVRFDQYGTSDRVSCELVDNFPVSGVVRNRGRVSRNEALSAMADCDVLLLIQNTED ISAETIPSKTYEYFHMAKPILGLLHRNPELSRMLAELGHRPLAADDPVAVKQGLMEMIYEWQEGGRREMAISPYTVKAAV GRLVAIADSILKN >Mature_333_residues MNLLLFPLYALEKLLIDLDSQWWWFPLAAFAGGRLCKEHKPELIYSTGGAASAHMAAFFVSRFTGLPWIAEFQDPLVFRD WKRSKRAYAVYAFVERVVCARASAVIYLTEAAREHASKRTELGDKGYVIYAGAEPATPEYDDSRPCCRDTWRIAHFGSLG GSRNLSVFLRGLEMFLSNRPELAEIVRFDQYGTSDRVSCELVDNFPVSGVVRNRGRVSRNEALSAMADCDVLLLIQNTED ISAETIPSKTYEYFHMAKPILGLLHRNPELSRMLAELGHRPLAADDPVAVKQGLMEMIYEWQEGGRREMAISPYTVKAAV GRLVAIADSILKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37449; Mature: 37449
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLLFPLYALEKLLIDLDSQWWWFPLAAFAGGRLCKEHKPELIYSTGGAASAHMAAFFV CCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCEEEECCCCCHHHHHHHHH SRFTGLPWIAEFQDPLVFRDWKRSKRAYAVYAFVERVVCARASAVIYLTEAAREHASKRT HHHCCCCCHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHH ELGDKGYVIYAGAEPATPEYDDSRPCCRDTWRIAHFGSLGGSRNLSVFLRGLEMFLSNRP CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCC ELAEIVRFDQYGTSDRVSCELVDNFPVSGVVRNRGRVSRNEALSAMADCDVLLLIQNTED CHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCC ISAETIPSKTYEYFHMAKPILGLLHRNPELSRMLAELGHRPLAADDPVAVKQGLMEMIYE CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH WQEGGRREMAISPYTVKAAVGRLVAIADSILKN HHHCCCEEEEECCEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLLLFPLYALEKLLIDLDSQWWWFPLAAFAGGRLCKEHKPELIYSTGGAASAHMAAFFV CCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCEEEECCCCCHHHHHHHHH SRFTGLPWIAEFQDPLVFRDWKRSKRAYAVYAFVERVVCARASAVIYLTEAAREHASKRT HHHCCCCCHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHH ELGDKGYVIYAGAEPATPEYDDSRPCCRDTWRIAHFGSLGGSRNLSVFLRGLEMFLSNRP CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCC ELAEIVRFDQYGTSDRVSCELVDNFPVSGVVRNRGRVSRNEALSAMADCDVLLLIQNTED CHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCC ISAETIPSKTYEYFHMAKPILGLLHRNPELSRMLAELGHRPLAADDPVAVKQGLMEMIYE CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH WQEGGRREMAISPYTVKAAVGRLVAIADSILKN HHHCCCEEEEECCEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA