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The map label for this gene is yhcC [C]

Identifier: 39997325

GI number: 39997325

Start: 2443076

End: 2444104

Strand: Reverse

Name: yhcC [C]

Synonym: GSU2227

Alternate gene names: 39997325

Gene position: 2444104-2443076 (Counterclockwise)

Preceding gene: 39997326

Following gene: 39997324

Centisome position: 64.08

GC content: 67.06

Gene sequence:

>1029_bases
ATGACGCGGCCCGTTATCGTCCCGTTTTTTATTTCCCATCAGGGATGCCCCCACCGCTGCGTCTTCTGCGACCAGGAACG
CATTGCGGGCCGGGCCGGCCGGCTTCCGTCCGCCGCAGAGATCCATTCCGCCGTGAAGACCTTCGGCAGGGGACGGCCCG
TTGAGGCGGCTTTTTACGGCGGGACATTTACGAGCCTTCCCCGCAACGAGCAGGAGAGACTCCTGGCGGCGCTGCAGCCT
CTTCGGCACGATGGTTCCGTCAGGAGCGTGCGGCTCTCCACCCGGCCCGACGCCCTCGATGCCGAAACAGCCGGCTTTTT
GAAGTCCATGGGGGTAGCCAGCGTGGAACTGGGCGTTCAATCCATGGACGACCAAGTCCTGGATGTGTCCGGCAGAGGGC
ACTCGGCCGCTGACACGGTGCGGGCATTCGATGTCCTGCGGAGCGAGGGGATCGCCGTGGGGGCGCAACTGATGCCCGGA
CTGCCCGGCGACAGCCGGGAGCGCTCACTGGATTCCCTCACCCGGATCCTCGATCTGAAACCCGTCTCCCTCCGCATCTA
CCCGACCCTGGTAGTGGCGGGGACCAGGCTTGCCGAATTCTGGGCCGAAGGGAGCTACACCCCCTTGACCCTTGCCGATG
CCGTACCTCTTTGTGCCGACATGCTGCTGGCCTGCAAGCGGGCCGGGGTCCCGGTCATCCGGCTGGGCCTTCAGCCGACG
GATATCCTGGAACGTTCGGTGCTGGCGGGTCCCTGGCACCCGGCCCTGCGTCAGCTCGTGGAGGGCGAGCTCTGGTACCG
GCTGCTGGAGCGGCTTACCACCGGCCTTGCCGCGGGAACCGTGGTGTCGGTGGCCTGTGCCCCCGCGCGGATTTCCGATG
TGGTGGGACAGCGGCGCGTCAACCTGTCCCGCCTGCTGGAACGGCGGGGGATCGTCGTCACCGGTGTTGCCGGCTGTCCC
ACCGCGGCACCCGATACCCTTACCCTGACTCACGCCGGCGGCACCGTTGCCGGCAGTCTGACAGACTGA

Upstream 100 bases:

>100_bases
TCCTCGGCCAGGGGACGGGCAGGAGTAAGAAGGAGGCGGAGCAGGCTGCGGCGCGGCAATGCCTGGAACGCCTCGAAACG
GGGCGGTGCAGCGCTGCCCC

Downstream 100 bases:

>100_bases
ACGCCGCCCTTGCAGCGGCCACACTCACAAGGAGTACTATGTTGTCGAAAACGCCATTCCGCTCGGGCTTTGTCTCGATC
ATCGGCCGCCCCAACGTGGG

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTRPVIVPFFISHQGCPHRCVFCDQERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAAFYGGTFTSLPRNEQERLLAALQP
LRHDGSVRSVRLSTRPDALDAETAGFLKSMGVASVELGVQSMDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPG
LPGDSRERSLDSLTRILDLKPVSLRIYPTLVVAGTRLAEFWAEGSYTPLTLADAVPLCADMLLACKRAGVPVIRLGLQPT
DILERSVLAGPWHPALRQLVEGELWYRLLERLTTGLAAGTVVSVACAPARISDVVGQRRVNLSRLLERRGIVVTGVAGCP
TAAPDTLTLTHAGGTVAGSLTD

Sequences:

>Translated_342_residues
MTRPVIVPFFISHQGCPHRCVFCDQERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAAFYGGTFTSLPRNEQERLLAALQP
LRHDGSVRSVRLSTRPDALDAETAGFLKSMGVASVELGVQSMDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPG
LPGDSRERSLDSLTRILDLKPVSLRIYPTLVVAGTRLAEFWAEGSYTPLTLADAVPLCADMLLACKRAGVPVIRLGLQPT
DILERSVLAGPWHPALRQLVEGELWYRLLERLTTGLAAGTVVSVACAPARISDVVGQRRVNLSRLLERRGIVVTGVAGCP
TAAPDTLTLTHAGGTVAGSLTD
>Mature_341_residues
TRPVIVPFFISHQGCPHRCVFCDQERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAAFYGGTFTSLPRNEQERLLAALQPL
RHDGSVRSVRLSTRPDALDAETAGFLKSMGVASVELGVQSMDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGL
PGDSRERSLDSLTRILDLKPVSLRIYPTLVVAGTRLAEFWAEGSYTPLTLADAVPLCADMLLACKRAGVPVIRLGLQPTD
ILERSVLAGPWHPALRQLVEGELWYRLLERLTTGLAAGTVVSVACAPARISDVVGQRRVNLSRLLERRGIVVTGVAGCPT
AAPDTLTLTHAGGTVAGSLTD

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=230, Percent_Identity=29.5652173913043, Blast_Score=90, Evalue=4e-18,
Organism=Escherichia coli, GI2367204, Length=222, Percent_Identity=26.1261261261261, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI133955098, Length=189, Percent_Identity=29.6296296296296, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325171, Length=189, Percent_Identity=29.6296296296296, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19920684, Length=185, Percent_Identity=28.6486486486486, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006638
- InterPro:   IPR005910
- InterPro:   IPR007197 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36482; Mature: 36351

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPVIVPFFISHQGCPHRCVFCDQERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAAFYG
CCCCEEEEEEECCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
GTFTSLPRNEQERLLAALQPLRHDGSVRSVRLSTRPDALDAETAGFLKSMGVASVELGVQ
CEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHH
SMDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPGDSRERSLDSLTRILDLK
HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEECHHHCCCCCCCHHHHHHHHHHHHHCCC
PVSLRIYPTLVVAGTRLAEFWAEGSYTPLTLADAVPLCADMLLACKRAGVPVIRLGLQPT
CCEEEEEEEEEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHH
DILERSVLAGPWHPALRQLVEGELWYRLLERLTTGLAAGTVVSVACAPARISDVVGQRRV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
NLSRLLERRGIVVTGVAGCPTAAPDTLTLTHAGGTVAGSLTD
CHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCEEECCCCC
>Mature Secondary Structure 
TRPVIVPFFISHQGCPHRCVFCDQERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAAFYG
CCCEEEEEEECCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
GTFTSLPRNEQERLLAALQPLRHDGSVRSVRLSTRPDALDAETAGFLKSMGVASVELGVQ
CEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHH
SMDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPGDSRERSLDSLTRILDLK
HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEECHHHCCCCCCCHHHHHHHHHHHHHCCC
PVSLRIYPTLVVAGTRLAEFWAEGSYTPLTLADAVPLCADMLLACKRAGVPVIRLGLQPT
CCEEEEEEEEEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHH
DILERSVLAGPWHPALRQLVEGELWYRLLERLTTGLAAGTVVSVACAPARISDVVGQRRV
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
NLSRLLERRGIVVTGVAGCPTAAPDTLTLTHAGGTVAGSLTD
CHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]