| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997291
Identifier: 39997291
GI number: 39997291
Start: 2405117
End: 2405602
Strand: Reverse
Name: 39997291
Synonym: GSU2193
Alternate gene names: NA
Gene position: 2405602-2405117 (Counterclockwise)
Preceding gene: 39997292
Following gene: 39997290
Centisome position: 63.07
GC content: 58.64
Gene sequence:
>486_bases ATGAATCTCATCGACTGCGCTCTCAGGATGGAAGAAGAGGCAGCCGCCCATTACAGCCAACTGGCGGCTGCTGCGCCGGT GGAAGAGTTGAGGAGTATCTTCGGGCTGCTGGCCGCGGCTGAAAAGGAGCACCACGACAAACTCGTCGCCATGCTTGGCG ATGCCGATGCCGCCGCGACCGCATTCACTGCTCTGGATGATGCCTCGTGCGTGTTCAAGCCGCTGCTCGGCAAACGTGAT CTGGTGGCGGAACTGCGGCGCGACCCGGACGGTTACCGGCATGTGGTGAAAGAGGAAGAAGAAAGCATCAAGTTTTACGA GGATCTGGCTGCCAAGGCGGAGCGGGAGGACACGCGCGCCATTCTGCTCAAGCTCGCCGATGAGGAGCGGAGGCACCTGA GCATTGTTGAAAATATCTACTCGTTCATTGAGGAGCCCAAGACCTATCTGGCCTGGGGCGAATTCAGCAACCTCAAGGAG TACTGA
Upstream 100 bases:
>100_bases ACCCCTTCTTTCCCGCTCGGCCCCCGTGAAAAAAACGGAGTAATCTGGTATCCTTTCAGTAGGAGTACCAATAGTCACTC CAAGGAAAGGGGGCTTGAAT
Downstream 100 bases:
>100_bases CGGAGAGTGCGCGTGGCGTTACAAAGCCCGTCCGGCTGCGGACGGGCTTTTCTGTTGCGGTGGGGCACGGAAACCAATTA TAGTCAGATGTTGAGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNLIDCALRMEEEAAAHYSQLAAAAPVEELRSIFGLLAAAEKEHHDKLVAMLGDADAAATAFTALDDASCVFKPLLGKRD LVAELRRDPDGYRHVVKEEEESIKFYEDLAAKAEREDTRAILLKLADEERRHLSIVENIYSFIEEPKTYLAWGEFSNLKE Y
Sequences:
>Translated_161_residues MNLIDCALRMEEEAAAHYSQLAAAAPVEELRSIFGLLAAAEKEHHDKLVAMLGDADAAATAFTALDDASCVFKPLLGKRD LVAELRRDPDGYRHVVKEEEESIKFYEDLAAKAEREDTRAILLKLADEERRHLSIVENIYSFIEEPKTYLAWGEFSNLKE Y >Mature_161_residues MNLIDCALRMEEEAAAHYSQLAAAAPVEELRSIFGLLAAAEKEHHDKLVAMLGDADAAATAFTALDDASCVFKPLLGKRD LVAELRRDPDGYRHVVKEEEESIKFYEDLAAKAEREDTRAILLKLADEERRHLSIVENIYSFIEEPKTYLAWGEFSNLKE Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18173; Mature: 18173
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIDCALRMEEEAAAHYSQLAAAAPVEELRSIFGLLAAAEKEHHDKLVAMLGDADAAAT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AFTALDDASCVFKPLLGKRDLVAELRRDPDGYRHVVKEEEESIKFYEDLAAKAEREDTRA HHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLKLADEERRHLSIVENIYSFIEEPKTYLAWGEFSNLKEY HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCC >Mature Secondary Structure MNLIDCALRMEEEAAAHYSQLAAAAPVEELRSIFGLLAAAEKEHHDKLVAMLGDADAAAT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AFTALDDASCVFKPLLGKRDLVAELRRDPDGYRHVVKEEEESIKFYEDLAAKAEREDTRA HHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLKLADEERRHLSIVENIYSFIEEPKTYLAWGEFSNLKEY HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA