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The map label for this gene is 39997085

Identifier: 39997085

GI number: 39997085

Start: 2178594

End: 2181188

Strand: Reverse

Name: 39997085

Synonym: GSU1987

Alternate gene names: NA

Gene position: 2181188-2178594 (Counterclockwise)

Preceding gene: 39997086

Following gene: 39997084

Centisome position: 57.19

GC content: 58.27

Gene sequence:

>2595_bases
GTGAAACTGCTCCAGGAGGGGAATCCGGGCGGTGCGGTCGTTCTCTTTAAAAGCGCCCTGGAAAAAGATCAGAATTTCCA
GGATGCACGCTACCAACTGGCCAAAGCGTATCAGGCCTTGGGCAAATACGAACAGGCTGAGAAAGAATATCTCAAAGTTC
TGAAGCAGAATCCGTCCAAAACCGACATCGTTCTTGAACTGGCCAAGCTCTACAACTCACAGAGGAAGCCGGATCAGGCT
GTCGAGCAGGCCGGTAAATACCTCCAATCAAATCCCGGCTCTGCAGAGGCCCTTGAAGTACTGGGTCTCGGTTATGCACT
GAAGGGGATGCCTGCAGAGGCTGAACGGAATTTCCTGCTTGCCCTCGAAAAGGAGCCGCGACGGACTTCCGCGAAGCTCC
AGTTGGCGGTTCTCCTGATGGAACAGAAATCGAGCCGTGAAAAGGAAGCCCGTGCACTCATAGACGAAATCCTGACGGCT
GATCCCGGCAACGTGAAGGCCCACAATCTTCTGGCCAGCTACGAGCTGTCTCTCGGCAATCGCGAACAGGCGCTGGAGAT
CTATCGGAAGGTTGCGGCGCTGACGCCTGGGGACCCGGCCCCACTTTACCGCCAGGGGGTCATTCTCCTGGAAAAGGGTG
AGATGGATAAAGCCGAGAAGACTGCCGAGACTCTGGTGCAAAAGTTCCCCCAAAAGTCCGAGGGAGCCCGTCTGAAGGGA
CTGATAGCGTACCAGCGCAAGAACTATGCTGACGCTATTACCGCTCTCCAGACTTCGGTGAAGATAGCGCCTTCCCTGGA
AGGGCTCTACTACCTCGGGTTGAGCATGTACAGCCGCGGCGAGCTCGAGAATGCTCTGAGCCAGTTCCGCCGCATCCTGG
ACCATACGCCGGATTTCGTCCAGGCCCGGCTCCTGACCGCCTTGATTCTGCTCAACCAAAAGAGGGTCGACGATGCCATT
GCCGAGGCAAACCGGGCCATCGAGACCGACAGCCGGAGCGCCCTTGCCCGCAATATACTCGGGAGTGCGTATCTTGCCAA
AGGAATGTACGACGAGGGCATTCGCGAACTCAACCGTGCCACCGAGCTCGATCCGAAAATTGTCGATGCCCATCTTAAGA
AAGGCATTTTCAATCTCAGCAAAGGACGCGTACGCGAGGCCGAGAGCGATTTCACCACAGCCGTCAGAGTTGCCCCGGAG
ATGCTCAACTCGCGGTTGGTGCTTGCTTTCCACTACATGCGGCAGCACCGCAGCGACCGTGCCCTGGCCACTCTGAAGGA
GGGGCTGACGGGCACCAAAGGGGATGCCTCCCTTTACAACACCATGGCCGCCATCATGTTCAACGAGCGGAAGCCGGCCG
AAGCCGTCAAGTACCTCAATATGGCGAGAAAGAGTGACCCGGCGTTCCTGCCGGCCCGGTTCAATCTGGCAACCTATCAC
GCCTCCACCGGAGATCTGGATGGGGCAATAGCCGAGTATTCCCGCATGGTTCAGGAATATCCCCATAACCTCAGGGCAAT
TCTCGGACTCGCTTCCCTGTCTGAATTGAAGGGAAGGGAAAGTGATGCTCTTGCCTGGTACACCAAGGCCCGGGATACGG
GCGAGTATGCCGGCTATCTCTCTCTTGCCGGTTACCATGAGAAAAAGGGGAACCTCGACAAGGCCCTTGCCGTGCTGGAC
GATGCTGTCAAGGCAAAGCCCCGCGCGGCAGAGGCGTTCGTAATGAAAGGACGGATTCTCCTCGCTCAGAAAAAAGGGAA
AGACGCAATCAGAGTTTTCACCGACCTGGAATCGATTGCCCCCGAGCAGGGGCTTGCCCTGAAAGTGGCGGCCTTCGTTC
AGATGAAGGAGTCTGCAAAGGCCATCGAAGAGGCGCGCCGTGCCGTGACACTCAAGCCTGGCGCCGCCTTTGGTCATTCG
ATTCTCGCGTCGGTCTATGCGGAACAAGGGGATCTCCCGCGGGCAATTCAGGAGGTGAAAGCCGGCCTCAGGGCAGAACC
CGGCAATATCGGGGCTGCCATGCAACTGGGAGAGTATCTCGGCCGCAGCGGCAATACCGCCGCCGCCATGGCGCAGTACG
AAGCCGTCCTCAGAAACAACCCCAACCATGCTCCGGCCCTTTTTGCCCAGGGTATGCTCCTGGAAATGGGCGGCAAAAAG
CGGGAGGCCGTAACGAAGTACCGGCAGACCCTGGAGAAGGCCGAATCCTTCGCGCCTGCTCTCAACAACCTGGCGTTTCT
TTACGCCGAGGGCTACGGTCCCCGTGAAGAGGCCCTCCGCATGGCGCTTACCGCTCTCAAGCAGGAACCTGCCAATGCTG
CCATTGCCGATACCTACGGTTACGCCCTCGTGAAAAACGGCCGGGCCGGCGAGGCCGTAAAGATTCTGGAAAAAGTGGTC
AAACTCATGCCGTCAAATCCGGCGGTTCGCTACCACCTGGCGCTTGCCTATCGCGACACGGGCGATCGTGCCCGCGCTGC
GACGACTCTCCAAGAGGCTCTCAATCAGGGGGACTTCCCCGAGTCCGGCCAGGCGCGCATCATGCTCGCCGAGCTTTCCG
GTGCTGCTGGAACGGTGAAAAAAGGGAAATACTGA

Upstream 100 bases:

>100_bases
AGCATTGTCTAGATCATTCATCATCACGGGCCTCGTCGTTCTCATGTTCACCCTGTCCGGTTGCGGGGGCAAGAGCAGGG
ACGAGTTGTACACCGAGGGG

Downstream 100 bases:

>100_bases
TATGAAACGTTCAATTGCACTAATGGTGGGGGATGGTTTCTGTGCAGTTACGGCCATACTGGCGGCTCACCTCTTCCGCT
TGGGCGAAATACCCGGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 864; Mature: 864

Protein sequence:

>864_residues
MKLLQEGNPGGAVVLFKSALEKDQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQA
VEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERNFLLALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTA
DPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKG
LIAYQRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFVQARLLTALILLNQKRVDDAI
AEANRAIETDSRSALARNILGSAYLAKGMYDEGIRELNRATELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPE
MLNSRLVLAFHYMRQHRSDRALATLKEGLTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYH
ASTGDLDGAIAEYSRMVQEYPHNLRAILGLASLSELKGRESDALAWYTKARDTGEYAGYLSLAGYHEKKGNLDKALAVLD
DAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEARRAVTLKPGAAFGHS
ILASVYAEQGDLPRAIQEVKAGLRAEPGNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKK
REAVTKYRQTLEKAESFAPALNNLAFLYAEGYGPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKVV
KLMPSNPAVRYHLALAYRDTGDRARAATTLQEALNQGDFPESGQARIMLAELSGAAGTVKKGKY

Sequences:

>Translated_864_residues
MKLLQEGNPGGAVVLFKSALEKDQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQA
VEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERNFLLALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTA
DPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKG
LIAYQRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFVQARLLTALILLNQKRVDDAI
AEANRAIETDSRSALARNILGSAYLAKGMYDEGIRELNRATELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPE
MLNSRLVLAFHYMRQHRSDRALATLKEGLTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYH
ASTGDLDGAIAEYSRMVQEYPHNLRAILGLASLSELKGRESDALAWYTKARDTGEYAGYLSLAGYHEKKGNLDKALAVLD
DAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEARRAVTLKPGAAFGHS
ILASVYAEQGDLPRAIQEVKAGLRAEPGNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKK
REAVTKYRQTLEKAESFAPALNNLAFLYAEGYGPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKVV
KLMPSNPAVRYHLALAYRDTGDRARAATTLQEALNQGDFPESGQARIMLAELSGAAGTVKKGKY
>Mature_864_residues
MKLLQEGNPGGAVVLFKSALEKDQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQA
VEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERNFLLALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTA
DPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKG
LIAYQRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFVQARLLTALILLNQKRVDDAI
AEANRAIETDSRSALARNILGSAYLAKGMYDEGIRELNRATELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPE
MLNSRLVLAFHYMRQHRSDRALATLKEGLTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYH
ASTGDLDGAIAEYSRMVQEYPHNLRAILGLASLSELKGRESDALAWYTKARDTGEYAGYLSLAGYHEKKGNLDKALAVLD
DAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEARRAVTLKPGAAFGHS
ILASVYAEQGDLPRAIQEVKAGLRAEPGNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKK
REAVTKYRQTLEKAESFAPALNNLAFLYAEGYGPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKVV
KLMPSNPAVRYHLALAYRDTGDRARAATTLQEALNQGDFPESGQARIMLAELSGAAGTVKKGKY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=466, Percent_Identity=25.1072961373391, Blast_Score=101, Evalue=3e-21,
Organism=Homo sapiens, GI32307148, Length=466, Percent_Identity=25.1072961373391, Blast_Score=101, Evalue=4e-21,
Organism=Homo sapiens, GI83415184, Length=209, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=8e-13,
Organism=Homo sapiens, GI301336134, Length=209, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=461, Percent_Identity=22.5596529284165, Blast_Score=89, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115532692, Length=429, Percent_Identity=24.009324009324, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17647755, Length=489, Percent_Identity=22.9038854805726, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585827, Length=489, Percent_Identity=22.9038854805726, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585829, Length=489, Percent_Identity=22.9038854805726, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 94649; Mature: 94649

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLQEGNPGGAVVLFKSALEKDQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPSK
CCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERNFLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCCCCCCEEE
ALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTADPGNVKAHNLLASYELSLGN
EECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCC
REQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKG
HHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHH
LIAYQRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFV
HHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
QARLLTALILLNQKRVDDAIAEANRAIETDSRSALARNILGSAYLAKGMYDEGIRELNRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
TELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPEMLNSRLVLAFHYMRQHRSDR
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
ALATLKEGLTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYH
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
ASTGDLDGAIAEYSRMVQEYPHNLRAILGLASLSELKGRESDALAWYTKARDTGEYAGYL
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHH
SLAGYHEKKGNLDKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIA
HHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHC
PEQGLALKVAAFVQMKESAKAIEEARRAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVK
CCCCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH
AGLRAEPGNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKK
HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCCH
REAVTKYRQTLEKAESFAPALNNLAFLYAEGYGPREEALRMALTALKQEPANAAIADTYG
HHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHCC
YALVKNGRAGEAVKILEKVVKLMPSNPAVRYHLALAYRDTGDRARAATTLQEALNQGDFP
CCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCC
ESGQARIMLAELSGAAGTVKKGKY
CCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKLLQEGNPGGAVVLFKSALEKDQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPSK
CCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERNFLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCCCCCCEEE
ALEKEPRRTSAKLQLAVLLMEQKSSREKEARALIDEILTADPGNVKAHNLLASYELSLGN
EECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCC
REQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQKSEGARLKG
HHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHH
LIAYQRKNYADAITALQTSVKIAPSLEGLYYLGLSMYSRGELENALSQFRRILDHTPDFV
HHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
QARLLTALILLNQKRVDDAIAEANRAIETDSRSALARNILGSAYLAKGMYDEGIRELNRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
TELDPKIVDAHLKKGIFNLSKGRVREAESDFTTAVRVAPEMLNSRLVLAFHYMRQHRSDR
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
ALATLKEGLTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYH
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
ASTGDLDGAIAEYSRMVQEYPHNLRAILGLASLSELKGRESDALAWYTKARDTGEYAGYL
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHH
SLAGYHEKKGNLDKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIA
HHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHC
PEQGLALKVAAFVQMKESAKAIEEARRAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVK
CCCCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH
AGLRAEPGNIGAAMQLGEYLGRSGNTAAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKK
HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCCH
REAVTKYRQTLEKAESFAPALNNLAFLYAEGYGPREEALRMALTALKQEPANAAIADTYG
HHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHCC
YALVKNGRAGEAVKILEKVVKLMPSNPAVRYHLALAYRDTGDRARAATTLQEALNQGDFP
CCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCC
ESGQARIMLAELSGAAGTVKKGKY
CCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]