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The map label for this gene is epsN [H]

Identifier: 39997072

GI number: 39997072

Start: 2164516

End: 2165670

Strand: Reverse

Name: epsN [H]

Synonym: GSU1974

Alternate gene names: 39997072

Gene position: 2165670-2164516 (Counterclockwise)

Preceding gene: 39997073

Following gene: 39997071

Centisome position: 56.78

GC content: 60.0

Gene sequence:

>1155_bases
ATGATTCCGCTGTCAGTGCCAACCCTTAAAGGGAACGAATGGAAATACGTCAAGGAATGCCTGGATACGGGATGGGTATC
CTCGGCCGGCAAGTTTGTTGACAGGTTCGAGTCGGACTTTTGCGCTTTCACCGGCTCCCGCCACGCAGTGGCCTGCGTGA
ACGGAACGGCGGCTCTCCAGGTGGCTCTCAGGATCGTGGGAGTCTGCGCCGGTGACGAGGTCATCGTGCCGACCCTGACT
TTCATCGCCACGGTCAATGCCGTTACATACCTGGGCGCCGAACCTGTGTTCATGGACTGCGATGAGTTCTACAACATCGA
TGTCCGCAAGACGGCCGAGTTTCTCGAGCAGGAGACCGAGTTCAGGGACGGCAGTACCTGGAGCCGGGTCACGGGACGGC
GAATTGCTGCGATCGTGCCGGTCCATGTCTTCGGCAATGCCGCCAGAATGAGCGAGCTCGTAGCCCTCTGCCGAGAGCGC
AACATCAAGGTGGTGGAGGATTCGACCGAAAGCCTCGGCACCGTCTACTGCTCCGGCGAGTTGGACGGGAAGCACACGGG
TACCGTGGGTGACATGGGGTGCTTCTCGTTCAACGGCAATAAAATCATCACCACCGGCGGCGGCGGGATGATCGTCACCG
ATGTCCCCGAATACGCCGAGCGGGCCAGGTACCTCACCACCCAGGCAAAGGATGACGAGGTCAGGTACGTCCACAATGAA
GTGGGCTACAACTTTCGCCTGACCAACGTTCAGGCGGCCATCGGCGTGGCCCAGTTGGAGCTGCTCCCCGAATTCCTTGA
GGCGAAACGCGCCAATTATCTCGCCTACCAGGAGAGGATCGACCGCATCGACGGACTCATCCTGGCGGAAGGCCCCGCCT
ATGCCCGCAACAACCACTGGATGTACGCGTTGCAGATAGATCCGGCCGTCTATGGCAAGGACCGTGAGCAGTTGATGGAA
TATCTGAAAGGGGAGGGAGTCCAGACCCGTCCGGTCTGGTACCTGAACCATCTGCAGGTCCCCTTCCGCGACTGCCGGAA
CTATCGCATAGAAAAGGCGTTCCAGTTGCTGGAGGCGACCCTGAGCATCCCGTGCAGCGCCAACCTGAGCGAAAGCGACA
TCGACTTCGTCGCCGAAAGGCTGCGCCGTGGCTAG

Upstream 100 bases:

>100_bases
GGGGGCTCGTCGAGACGGTCGAGTGGTTCGTCCGACCGGAGAATCTCAAAGCTTACAAGGCCAATATCTACAACATCTGA
AAGACCGCGAAAGGGACCCG

Downstream 100 bases:

>100_bases
CATTGTCGTGATCGGGGGGGGCGGGCACGCCAAGGTCGTCATCAGCGTGCTGAAAAAGGCCGGCTGCCTGGTGGCAGGCT
ATACCGACCGCCAGGATCGG

Product: DegT/DnrJ/EryC1/StrS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIPLSVPTLKGNEWKYVKECLDTGWVSSAGKFVDRFESDFCAFTGSRHAVACVNGTAALQVALRIVGVCAGDEVIVPTLT
FIATVNAVTYLGAEPVFMDCDEFYNIDVRKTAEFLEQETEFRDGSTWSRVTGRRIAAIVPVHVFGNAARMSELVALCRER
NIKVVEDSTESLGTVYCSGELDGKHTGTVGDMGCFSFNGNKIITTGGGGMIVTDVPEYAERARYLTTQAKDDEVRYVHNE
VGYNFRLTNVQAAIGVAQLELLPEFLEAKRANYLAYQERIDRIDGLILAEGPAYARNNHWMYALQIDPAVYGKDREQLME
YLKGEGVQTRPVWYLNHLQVPFRDCRNYRIEKAFQLLEATLSIPCSANLSESDIDFVAERLRRG

Sequences:

>Translated_384_residues
MIPLSVPTLKGNEWKYVKECLDTGWVSSAGKFVDRFESDFCAFTGSRHAVACVNGTAALQVALRIVGVCAGDEVIVPTLT
FIATVNAVTYLGAEPVFMDCDEFYNIDVRKTAEFLEQETEFRDGSTWSRVTGRRIAAIVPVHVFGNAARMSELVALCRER
NIKVVEDSTESLGTVYCSGELDGKHTGTVGDMGCFSFNGNKIITTGGGGMIVTDVPEYAERARYLTTQAKDDEVRYVHNE
VGYNFRLTNVQAAIGVAQLELLPEFLEAKRANYLAYQERIDRIDGLILAEGPAYARNNHWMYALQIDPAVYGKDREQLME
YLKGEGVQTRPVWYLNHLQVPFRDCRNYRIEKAFQLLEATLSIPCSANLSESDIDFVAERLRRG
>Mature_384_residues
MIPLSVPTLKGNEWKYVKECLDTGWVSSAGKFVDRFESDFCAFTGSRHAVACVNGTAALQVALRIVGVCAGDEVIVPTLT
FIATVNAVTYLGAEPVFMDCDEFYNIDVRKTAEFLEQETEFRDGSTWSRVTGRRIAAIVPVHVFGNAARMSELVALCRER
NIKVVEDSTESLGTVYCSGELDGKHTGTVGDMGCFSFNGNKIITTGGGGMIVTDVPEYAERARYLTTQAKDDEVRYVHNE
VGYNFRLTNVQAAIGVAQLELLPEFLEAKRANYLAYQERIDRIDGLILAEGPAYARNNHWMYALQIDPAVYGKDREQLME
YLKGEGVQTRPVWYLNHLQVPFRDCRNYRIEKAFQLLEATLSIPCSANLSESDIDFVAERLRRG

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=394, Percent_Identity=30.4568527918782, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI2367285, Length=338, Percent_Identity=29.2899408284024, Blast_Score=118, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42898; Mature: 42898

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLSVPTLKGNEWKYVKECLDTGWVSSAGKFVDRFESDFCAFTGSRHAVACVNGTAALQ
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCEEEEECCHHHHH
VALRIVGVCAGDEVIVPTLTFIATVNAVTYLGAEPVFMDCDEFYNIDVRKTAEFLEQETE
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCHHHHHHHHHHHHC
FRDGSTWSRVTGRRIAAIVPVHVFGNAARMSELVALCRERNIKVVEDSTESLGTVYCSGE
CCCCCCHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCC
LDGKHTGTVGDMGCFSFNGNKIITTGGGGMIVTDVPEYAERARYLTTQAKDDEVRYVHNE
CCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEHHH
VGYNFRLTNVQAAIGVAQLELLPEFLEAKRANYLAYQERIDRIDGLILAEGPAYARNNHW
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCE
MYALQIDPAVYGKDREQLMEYLKGEGVQTRPVWYLNHLQVPFRDCRNYRIEKAFQLLEAT
EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHH
LSIPCSANLSESDIDFVAERLRRG
HCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIPLSVPTLKGNEWKYVKECLDTGWVSSAGKFVDRFESDFCAFTGSRHAVACVNGTAALQ
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCEEEEECCHHHHH
VALRIVGVCAGDEVIVPTLTFIATVNAVTYLGAEPVFMDCDEFYNIDVRKTAEFLEQETE
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCHHHHHHHHHHHHC
FRDGSTWSRVTGRRIAAIVPVHVFGNAARMSELVALCRERNIKVVEDSTESLGTVYCSGE
CCCCCCHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCC
LDGKHTGTVGDMGCFSFNGNKIITTGGGGMIVTDVPEYAERARYLTTQAKDDEVRYVHNE
CCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEHHH
VGYNFRLTNVQAAIGVAQLELLPEFLEAKRANYLAYQERIDRIDGLILAEGPAYARNNHW
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCE
MYALQIDPAVYGKDREQLMEYLKGEGVQTRPVWYLNHLQVPFRDCRNYRIEKAFQLLEAT
EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHH
LSIPCSANLSESDIDFVAERLRRG
HCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]