Click here to switch to the map view.

The map label for this gene is 39997052

Identifier: 39997052

GI number: 39997052

Start: 2142773

End: 2144104

Strand: Reverse

Name: 39997052

Synonym: GSU1954

Alternate gene names: NA

Gene position: 2144104-2142773 (Counterclockwise)

Preceding gene: 39997053

Following gene: 39997051

Centisome position: 56.21

GC content: 44.67

Gene sequence:

>1332_bases
ATGCAGGATATGACATTAGACCGCCGGTCGGCCATTGGGCCGAGTGGGGAATATACGGACAACCGTCCGGTCGAATACCC
GTATGTTGGTAAAACGCTGCTGTTGCTGTTCTGCGGTTATGTACTTACGTGGTATCTGCAGCTAGGCTACAGGATTCCAG
CCCTTGGTGACATAAGGTTCGAGTTTATTTACGCGTTGGTGTTGACAGCGCTGGCATTTCTGGCGACGCCAAAGGTCGAC
ACTAAGTGTCCTCTTCTCCCGTATGTTTTGTTGTACTTTCTGGTGATAGTTATTCAAGTACCATTTTCTCATGATTTTGC
CAGATCGTGGGACGTATTTGTCGACCGGATTGTCAAATTTGCCTTCATGGCGTTTTTCATCGTTTCATTTGTGCGCAGCC
CGAATAACATGAAGTATTTCCTGGGGGCATTCCTCTTGGCTTGCCTGAAGATGGGACAGGAAGGATTTGTTGGGCGAATA
TCGGGTGGGTTGATCTGGGAAAATCAGGGAATTCCACGTCTCCATGGTTCAACTCCCCTCTATGCCCACCCAAACTCCTT
TGCCGGTATGGCGCTCGGAACGCTGCCCTTTGTCTATTTTCTCTGGCCGCTGAGCAACAAATATATCAAGGCTGTTTTGT
TGGCACTTGCCGGCCTCTCGCTGCATATTGTGCTGTATACTGGCTCCAGGACGGCATACTTAGGTATATTGGCATTTGTT
GCGTTTGCATTTTACACCTCGAACTACAAGAGGAAGTTTATTGGTTACATTGTGTTGGTCTTAGCACTGTCCGTACCGCT
GATTCCGTCTGATTATCAGGATAGATTCAAATCCATCTTCACCCTTGAGGAAAAGGAGGGGCGGTCAAGCGAAGCAAGAA
TACAAATACTCGAAGATGCGTGGGAAATCTTCACGGATTATCCATTCGGCGTTGGTGTCGCGGCGTTCCCCAAGGTGAGA
GCGGAGCATTTCGGCAGATCGCAGGATACACATAACCTGTATCTTGAAATAGCTACTAATCTAGGAATACAGGGGCTGAT
CGTTGTAGGGCTTATGATATATAAAATGCTTAGCATTTTGAATTATATCCGAACTAAAAGTAAACATAGTTTATATCAGT
TAGGTGTTAATGGCGGTTCGGCCAGAATTAAAGAAGACCTCTGTTTTATAGAAGCTGTTGCCTCATCAATTATAGGATTT
TTGATTATAAGACTCACTCTTGGTTTGTTCGGAATGGATCTTTATGAGATTTACTGGTGGTTTGCTATAGGAATGACTTT
CTCACTCCATTCTATGTTCAATAAAATTGAAAGTAACTTTGTTAAATTTTAA

Upstream 100 bases:

>100_bases
ATGACTACTTCAAGGAGCTTTTTGGCGGACAGACAAAGATAGAAGTCACGGCCGTCGAAGCCATCCTGCCTGAAGCTTCA
GGAAAGTATCGGTTTTCAAT

Downstream 100 bases:

>100_bases
TTTAAATTTGTGGTTATGACGACAAGAAATATAACATGAATGATTCAAGGAAACTATAATGTGCGGAATTGTAGGTAAAT
ATTATTTTAATAAAAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MQDMTLDRRSAIGPSGEYTDNRPVEYPYVGKTLLLLFCGYVLTWYLQLGYRIPALGDIRFEFIYALVLTALAFLATPKVD
TKCPLLPYVLLYFLVIVIQVPFSHDFARSWDVFVDRIVKFAFMAFFIVSFVRSPNNMKYFLGAFLLACLKMGQEGFVGRI
SGGLIWENQGIPRLHGSTPLYAHPNSFAGMALGTLPFVYFLWPLSNKYIKAVLLALAGLSLHIVLYTGSRTAYLGILAFV
AFAFYTSNYKRKFIGYIVLVLALSVPLIPSDYQDRFKSIFTLEEKEGRSSEARIQILEDAWEIFTDYPFGVGVAAFPKVR
AEHFGRSQDTHNLYLEIATNLGIQGLIVVGLMIYKMLSILNYIRTKSKHSLYQLGVNGGSARIKEDLCFIEAVASSIIGF
LIIRLTLGLFGMDLYEIYWWFAIGMTFSLHSMFNKIESNFVKF

Sequences:

>Translated_443_residues
MQDMTLDRRSAIGPSGEYTDNRPVEYPYVGKTLLLLFCGYVLTWYLQLGYRIPALGDIRFEFIYALVLTALAFLATPKVD
TKCPLLPYVLLYFLVIVIQVPFSHDFARSWDVFVDRIVKFAFMAFFIVSFVRSPNNMKYFLGAFLLACLKMGQEGFVGRI
SGGLIWENQGIPRLHGSTPLYAHPNSFAGMALGTLPFVYFLWPLSNKYIKAVLLALAGLSLHIVLYTGSRTAYLGILAFV
AFAFYTSNYKRKFIGYIVLVLALSVPLIPSDYQDRFKSIFTLEEKEGRSSEARIQILEDAWEIFTDYPFGVGVAAFPKVR
AEHFGRSQDTHNLYLEIATNLGIQGLIVVGLMIYKMLSILNYIRTKSKHSLYQLGVNGGSARIKEDLCFIEAVASSIIGF
LIIRLTLGLFGMDLYEIYWWFAIGMTFSLHSMFNKIESNFVKF
>Mature_443_residues
MQDMTLDRRSAIGPSGEYTDNRPVEYPYVGKTLLLLFCGYVLTWYLQLGYRIPALGDIRFEFIYALVLTALAFLATPKVD
TKCPLLPYVLLYFLVIVIQVPFSHDFARSWDVFVDRIVKFAFMAFFIVSFVRSPNNMKYFLGAFLLACLKMGQEGFVGRI
SGGLIWENQGIPRLHGSTPLYAHPNSFAGMALGTLPFVYFLWPLSNKYIKAVLLALAGLSLHIVLYTGSRTAYLGILAFV
AFAFYTSNYKRKFIGYIVLVLALSVPLIPSDYQDRFKSIFTLEEKEGRSSEARIQILEDAWEIFTDYPFGVGVAAFPKVR
AEHFGRSQDTHNLYLEIATNLGIQGLIVVGLMIYKMLSILNYIRTKSKHSLYQLGVNGGSARIKEDLCFIEAVASSIIGF
LIIRLTLGLFGMDLYEIYWWFAIGMTFSLHSMFNKIESNFVKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50254; Mature: 50254

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDMTLDRRSAIGPSGEYTDNRPVEYPYVGKTLLLLFCGYVLTWYLQLGYRIPALGDIRF
CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
EFIYALVLTALAFLATPKVDTKCPLLPYVLLYFLVIVIQVPFSHDFARSWDVFVDRIVKF
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AFMAFFIVSFVRSPNNMKYFLGAFLLACLKMGQEGFVGRISGGLIWENQGIPRLHGSTPL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCCCCCCCC
YAHPNSFAGMALGTLPFVYFLWPLSNKYIKAVLLALAGLSLHIVLYTGSRTAYLGILAFV
EECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH
AFAFYTSNYKRKFIGYIVLVLALSVPLIPSDYQDRFKSIFTLEEKEGRSSEARIQILEDA
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHH
WEIFTDYPFGVGVAAFPKVRAEHFGRSQDTHNLYLEIATNLGIQGLIVVGLMIYKMLSIL
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
NYIRTKSKHSLYQLGVNGGSARIKEDLCFIEAVASSIIGFLIIRLTLGLFGMDLYEIYWW
HHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIGMTFSLHSMFNKIESNFVKF
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDMTLDRRSAIGPSGEYTDNRPVEYPYVGKTLLLLFCGYVLTWYLQLGYRIPALGDIRF
CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
EFIYALVLTALAFLATPKVDTKCPLLPYVLLYFLVIVIQVPFSHDFARSWDVFVDRIVKF
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AFMAFFIVSFVRSPNNMKYFLGAFLLACLKMGQEGFVGRISGGLIWENQGIPRLHGSTPL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCCCCCCCC
YAHPNSFAGMALGTLPFVYFLWPLSNKYIKAVLLALAGLSLHIVLYTGSRTAYLGILAFV
EECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH
AFAFYTSNYKRKFIGYIVLVLALSVPLIPSDYQDRFKSIFTLEEKEGRSSEARIQILEDA
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHH
WEIFTDYPFGVGVAAFPKVRAEHFGRSQDTHNLYLEIATNLGIQGLIVVGLMIYKMLSIL
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
NYIRTKSKHSLYQLGVNGGSARIKEDLCFIEAVASSIIGFLIIRLTLGLFGMDLYEIYWW
HHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIGMTFSLHSMFNKIESNFVKF
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA