Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is capK [H]

Identifier: 39997053

GI number: 39997053

Start: 2144092

End: 2145453

Strand: Reverse

Name: capK [H]

Synonym: GSU1955

Alternate gene names: 39997053

Gene position: 2145453-2144092 (Counterclockwise)

Preceding gene: 39997054

Following gene: 39997052

Centisome position: 56.25

GC content: 53.82

Gene sequence:

>1362_bases
ATGATGGCGCTAAATGGAAATGGATTGTCATGGCTTAGACGTGCTGTGTTCGAGCCTCTCTATTATTTGAGGGCTGGCAG
TCCATTTCTGGACTACTGGATAACCCTTGAACAGACGCAGTATCTGCCTGAAACGGTGCTGCGTGAAAGGCAACGGCGAA
GATTGCGTGATCTTCTCCGGTATGCTTGGGAAAACAACGCATTTTACCGCTCCAGATTCGAGAGTGCCGGCGTAACGCCC
GGCATGCTGGACACTGATGACTGTATTGCAAAAATTCCGATACTTACCAAGGCTGACATTCGCTCTCATACAGCCGATAT
GATCAGCCGCGGATTTGACCGTGGGGAGTTGCTCAATTTCAAGACCGGCGGCTCAACGGGCAAATCGCTCGATATCTATG
TTACCGAAGAGTGCAGTGAGTTGAGAAACTCCTGCGCGCGGCGTCACGACCTCTGGACCGGCTGGAAGTCGGGGGAGCCG
ATTGCAGCCGTGTGGGGTAATCCCTATCTGCCGCACGGTGTGAAACAGAAACTCAGGGATTGGCTCGTTTCTCCGATGAT
CTACCTGGATACCATGTGCATATCGGAAGAGGCGATCGTGCGCTTTGCCGACGAATGGAAGCGGGTCCGTCCTACGTTGT
TGTTCGGGCACGCCCATTCCATCTATGTACTGGCTCAGTACGTTAGAGACCTGAAACTTTCCGGCATACGTCCGACTGGA
ATTCTGTCGACGTCGATGATGCTTATGCCCCATGAACGCAGGACCATTGAGTCGGTGTTCGGCATCAAGGTGACGGACCG
CTACGGGTGTGAGGAAGTCAGCTTGATCGCCTCCGAGTGTGAGAAGCACGAGGGGATGCATCTGAATATCGAGCACCTTT
ATATCGAGTTCGTTCGCGATGACGGCAGCCCTGCGGCCTCCGGAGAACCGGGTGCTATCGTTGTGACCGACCTGATGAAT
CGGGCAATGCCGTTTATCCGCTATCGGGTTGAGGATGTCGGAGTGCCGACAGATAGAAAATGCAGTTGTGGTCGGGGACT
TCCTCTCATGGAGAGCGTTACCGGGAGGGTGGCCGATTTCCTGGTGAAGAGCGACGGGTCGCGAGTGGCGGGGGTGTCAT
TGATCGAAAACACCCTGACGAAGATTCCGGGGATCGATCAGATGCAACTTGTGCAGGAGGCTGTAGATTCGCTCGTTGTC
AGGGTGGTGCCCGGCGCTGAGTTCAATGATGCTACACGGCGTGAACTACATGACTACTTCAAGGAGCTTTTTGGCGGACA
GACAAAGATAGAAGTCACGGCCGTCGAAGCCATCCTGCCTGAAGCTTCAGGAAAGTATCGGTTTTCAATATGCAGGATAT
GA

Upstream 100 bases:

>100_bases
TATCCACTTGGATATAATTGGCAAAAAAATAAATAAACAGTTGGCGAGGATGGTTACTCAATAACGGGATGGTTGATAAC
TTGATGCGGTGGCTAGCTCT

Downstream 100 bases:

>100_bases
CATTAGACCGCCGGTCGGCCATTGGGCCGAGTGGGGAATATACGGACAACCGTCCGGTCGAATACCCGTATGTTGGTAAA
ACGCTGCTGTTGCTGTTCTG

Product: capK related-protein

Products: AMP; Phenylacetyl-CoA; Diphosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLRYAWENNAFYRSRFESAGVTP
GMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNFKTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEP
IAAVWGNPYLPHGVKQKLRDWLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG
ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRDDGSPAASGEPGAIVVTDLMN
RAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADFLVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVV
RVVPGAEFNDATRRELHDYFKELFGGQTKIEVTAVEAILPEASGKYRFSICRI

Sequences:

>Translated_453_residues
MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLRYAWENNAFYRSRFESAGVTP
GMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNFKTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEP
IAAVWGNPYLPHGVKQKLRDWLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG
ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRDDGSPAASGEPGAIVVTDLMN
RAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADFLVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVV
RVVPGAEFNDATRRELHDYFKELFGGQTKIEVTAVEAILPEASGKYRFSICRI
>Mature_453_residues
MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLRYAWENNAFYRSRFESAGVTP
GMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNFKTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEP
IAAVWGNPYLPHGVKQKLRDWLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG
ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRDDGSPAASGEPGAIVVTDLMN
RAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADFLVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVV
RVVPGAEFNDATRRELHDYFKELFGGQTKIEVTAVEAILPEASGKYRFSICRI

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1541

COG function: function code H; Coenzyme F390 synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.2.1.30 [C]

Molecular weight: Translated: 51330; Mature: 51330

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLR
CEEECCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHH
YAWENNAFYRSRFESAGVTPGMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNF
HHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
KTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEPIAAVWGNPYLPHGVKQKLRD
ECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHH
WLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG
HHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC
ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRD
HHHHHHEECCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHEEEEEEEC
DGSPAASGEPGAIVVTDLMNRAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADF
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVVRVVPGAEFNDATRRELHDYF
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
KELFGGQTKIEVTAVEAILPEASGKYRFSICRI
HHHHCCCCEEEEEEEHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLR
CEEECCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHH
YAWENNAFYRSRFESAGVTPGMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNF
HHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEE
KTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEPIAAVWGNPYLPHGVKQKLRD
ECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHH
WLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG
HHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC
ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRD
HHHHHHEECCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHEEEEEEEC
DGSPAASGEPGAIVVTDLMNRAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADF
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVVRVVPGAEFNDATRRELHDYF
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
KELFGGQTKIEVTAVEAILPEASGKYRFSICRI
HHHHCCCCEEEEEEEHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; Coenzyme A; Phenylacetic acid [C]

Specific reaction: ATP + Coenzyme A + Phenylacetic acid --> AMP + Phenylacetyl-CoA + Diphosphate [C]

General reaction: Forming of carbon sulfur bond [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]