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The map label for this gene is 39996929

Identifier: 39996929

GI number: 39996929

Start: 1996689

End: 1997492

Strand: Reverse

Name: 39996929

Synonym: GSU1830

Alternate gene names: NA

Gene position: 1997492-1996689 (Counterclockwise)

Preceding gene: 39996930

Following gene: 39996925

Centisome position: 52.37

GC content: 64.3

Gene sequence:

>804_bases
ATGGTACGTCAACCAGCAGTGGCCGGACAGTTCTATACCGACGATCCCCGCAGGCTCAGGGAGGAGCTCGGCCACCTGAT
CCGGCCCGTGCCTGCCCCGCGCCGCGTAACCGGCGTCATCGCCCCCCACGCCGGCTATATGTATTCCGGCGCCATTGCCG
GCGCCGTCTACGGTTCGATTGTCATCCCCCGCACCGTTGTCATCCTCGGACCCAACCATCATGGCCTTGGCGCTGCCGCC
TCGCTCTACCCCGACGGAACATGGTTGTCGCCTCTGGGGGAGGTCCCGATCGAGCAGCGGCTTTCCTCGCTCGTTCTTGA
ACACGTGCCCCAGGCGGAACCCGATGTAATTGCCCACCGCTTCGAACATTCGCTGGAGGTGCAGGTGCCGTTCCTGCGCT
ATCTCAATAGTGATGTTGCCATTGTACCGATGTGTCTGGGTGGCGGCGGGTATGGCTGGTGTCGCCAGGTGGGGGAGGGG
CTGGCCCGGGCAATTGCTGCCTATGGCGAGGAGGTCCTGATCGTGGCGAGCTCCGACATGACCCATTACGAGTCGGCGGA
GAGTGCCCGGCTCAAGGATGAGGCCGCGCTTTCGTGTGTGCTGGCGCTGGACGCCGAAGGGTTGTTAAAGGTGTGCCGGC
AACGGGGCATAACCATGTGCGGGGTGATCCCGTCGACGGTCATGCTGGTGGCGGCTCGGGAGCTCGGCGCGTCCCGGGCG
GAACTGATCAGGTACGGAACCAGTGGCGATGTCACGGGGGACAACAGGCAGGTGGTTGCCTACGCGGCGGTTGCGGTCTA
TTAA

Upstream 100 bases:

>100_bases
CTCCGGAAGAGGGCAGAGAGCCGTAAATGTGGTATACGTTATACGTCGACACGTTGCCACAGGGGGGCGGCACGAGGTTA
CGGGTGTCAAGGAGGATGCC

Downstream 100 bases:

>100_bases
GCCTACTCTTCCTTGGATATCCTGACCACCTGCAGAACGCCGGGCATCCGCTCCAGGGTGGGGGCATCCAGGGTTTCCGT
GTCACCGATGACACCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MVRQPAVAGQFYTDDPRRLREELGHLIRPVPAPRRVTGVIAPHAGYMYSGAIAGAVYGSIVIPRTVVILGPNHHGLGAAA
SLYPDGTWLSPLGEVPIEQRLSSLVLEHVPQAEPDVIAHRFEHSLEVQVPFLRYLNSDVAIVPMCLGGGGYGWCRQVGEG
LARAIAAYGEEVLIVASSDMTHYESAESARLKDEAALSCVLALDAEGLLKVCRQRGITMCGVIPSTVMLVAARELGASRA
ELIRYGTSGDVTGDNRQVVAYAAVAVY

Sequences:

>Translated_267_residues
MVRQPAVAGQFYTDDPRRLREELGHLIRPVPAPRRVTGVIAPHAGYMYSGAIAGAVYGSIVIPRTVVILGPNHHGLGAAA
SLYPDGTWLSPLGEVPIEQRLSSLVLEHVPQAEPDVIAHRFEHSLEVQVPFLRYLNSDVAIVPMCLGGGGYGWCRQVGEG
LARAIAAYGEEVLIVASSDMTHYESAESARLKDEAALSCVLALDAEGLLKVCRQRGITMCGVIPSTVMLVAARELGASRA
ELIRYGTSGDVTGDNRQVVAYAAVAVY
>Mature_267_residues
MVRQPAVAGQFYTDDPRRLREELGHLIRPVPAPRRVTGVIAPHAGYMYSGAIAGAVYGSIVIPRTVVILGPNHHGLGAAA
SLYPDGTWLSPLGEVPIEQRLSSLVLEHVPQAEPDVIAHRFEHSLEVQVPFLRYLNSDVAIVPMCLGGGGYGWCRQVGEG
LARAIAAYGEEVLIVASSDMTHYESAESARLKDEAALSCVLALDAEGLLKVCRQRGITMCGVIPSTVMLVAARELGASRA
ELIRYGTSGDVTGDNRQVVAYAAVAVY

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=291, Percent_Identity=24.3986254295533, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357419, Length=289, Percent_Identity=25.6055363321799, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 28527; Mature: 28527

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQPAVAGQFYTDDPRRLREELGHLIRPVPAPRRVTGVIAPHAGYMYSGAIAGAVYGSI
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHE
VIPRTVVILGPNHHGLGAAASLYPDGTWLSPLGEVPIEQRLSSLVLEHVPQAEPDVIAHR
EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
FEHSLEVQVPFLRYLNSDVAIVPMCLGGGGYGWCRQVGEGLARAIAAYGEEVLIVASSDM
HCCCCEEEEHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
THYESAESARLKDEAALSCVLALDAEGLLKVCRQRGITMCGVIPSTVMLVAARELGASRA
CHHHCCHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHH
ELIRYGTSGDVTGDNRQVVAYAAVAVY
HHEEECCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MVRQPAVAGQFYTDDPRRLREELGHLIRPVPAPRRVTGVIAPHAGYMYSGAIAGAVYGSI
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHE
VIPRTVVILGPNHHGLGAAASLYPDGTWLSPLGEVPIEQRLSSLVLEHVPQAEPDVIAHR
EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
FEHSLEVQVPFLRYLNSDVAIVPMCLGGGGYGWCRQVGEGLARAIAAYGEEVLIVASSDM
HCCCCEEEEHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
THYESAESARLKDEAALSCVLALDAEGLLKVCRQRGITMCGVIPSTVMLVAARELGASRA
CHHHCCHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHH
ELIRYGTSGDVTGDNRQVVAYAAVAVY
HHEEECCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]